BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029688
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    91   3e-16
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    83   9e-14
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-13
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    78   4e-12
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    74   5e-11

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 23/251 (9%)
 Frame = +2

Query: 278 MEKLPREITTSILSRLPFKSIGQSRCVSKLWCTILSD-----------SKSSRIPDILLV 424
           ME LPREI   ILSRLP  S+ Q +CV + W  ++ D           ++ +  P ++L 
Sbjct: 25  MELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILH 84

Query: 425 CRERGIPKIYYV-----EDKEETFSQEPIEPFKTFDSRFLADSFYNYTYLVGFCNGFICL 589
           C       +Y+V     E+++E   + P  PF +    F          +VG CNG +CL
Sbjct: 85  CDFPIRNNLYFVDFAAHEEEKEKVKRIP-APFSSMMPEF---------EVVGSCNGLLCL 134

Query: 590 SQIKSLKNSSLPRNPIYLLNPVTGEHSALPHFTLPERDFPDKIEEGKKTDNCLSGFGFDN 769
           S   SL N SL     Y+ NP TG +  LP        +PD+          +SGFGF+ 
Sbjct: 135 SD--SLYNDSL-----YIYNPFTGCYKELP----KSLQYPDQ--------EVVSGFGFNP 175

Query: 770 STKKFKLVLVIFSARDYGAQIFN-------NEVQVHTLGGDRWKKKSGIVPDVLRHSYVT 928
            TK++K++ +++    +G    +       +EVQ+ TLG   W+    +   ++R +   
Sbjct: 176 KTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGKVSYRLVRRA--- 232

Query: 929 ESIALVNGCLH 961
            S ALVNG LH
Sbjct: 233 -SGALVNGRLH 242


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 83.2 bits (204), Expect = 9e-14
 Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 17/245 (6%)
 Frame = +2

Query: 278 MEKLPREITTSILSRLPFKSIGQSRCVSKLWCTI----------LSDSKSSRIPDILLVC 427
           ME LPREI   ILSRLP  S+ + +CV + W  +          LS S     P ++L C
Sbjct: 25  MELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCVILHC 84

Query: 428 RERGIPKIYYVEDKEETFSQEPIEPFKTFDSRFLADSFYNYTYLVGFCNGFICLSQIKSL 607
                  +Y+V+       +E ++  +   S  + +       +VG CNG +CLS   SL
Sbjct: 85  DFPIRNNLYFVDFAAHEEEKEKVKRIRAPFSSMMPE-----FEVVGSCNGLLCLSD--SL 137

Query: 608 KNSSLPRNPIYLLNPVTGEHSALPHFTLPERDFPDKIEEGKKTDNCLSGFGFDNSTKKFK 787
            N SL     Y+ NP TG +  LP        +PD+          + GFGF+  T ++K
Sbjct: 138 FNDSL-----YIYNPFTGRYKELP----KSLQYPDQ--------EVVFGFGFNPKTNEYK 180

Query: 788 LVLVIFSARDYGAQIFN-------NEVQVHTLGGDRWKKKSGIVPDVLRHSYVTESIALV 946
           ++ +++    +G    +       ++VQ+ TLG   W+    +   ++R +    S  LV
Sbjct: 181 VIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRRA----SETLV 236

Query: 947 NGCLH 961
           NG LH
Sbjct: 237 NGRLH 241


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 73/246 (29%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
 Frame = +2

Query: 269 EQRMEKLPREITTSILSRLPFKSIGQSRCVSKLWCTILSDSKSSRI----PDILLVCRER 436
           E  M  LP +IT  IL +LP KS  Q RCV + W  +LSDS  S +       +LV R  
Sbjct: 22  EWSMSALPDDITADILLQLPLKSKIQCRCVCRTWRNLLSDSYFSEVQRERAQSMLVLRSP 81

Query: 437 G----------IPKIYYVEDKEETFSQEPIEPFKTFDSRFLADSFYNYTYLVGFCNGFIC 586
                       P  +YV D E    +  +    T ++         +  LVG CNG +C
Sbjct: 82  PSCVSRKAAALAPNDFYVVDLESGSVRNNVMKLNTKNNLPTC-----HVELVGSCNGLLC 136

Query: 587 LSQIKSLKNSSLPRNPIYLLNPVTGEHSALPHFTLPERDFPDKIEEGKKTDNCLSGFGFD 766
           L      KNS   +   YL NPVTGEH   P     E+      + GK   + + GFGF 
Sbjct: 137 LFD----KNS---KKVFYLCNPVTGEHVRTPANCKKEK------QRGKTILDAVLGFGFS 183

Query: 767 NSTKKFKLVLVIFSARDYGAQIFNNEVQVHTLGGDRWKKKSGI-VPDVLRHSYVTESIAL 943
             +  + ++ +      Y   I  +E ++   G + WK    I  PD  +   V+     
Sbjct: 184 PKSNHYMVLRITRKKLTYPISILRSEGEICIFGDNEWKSIGEIPFPDCKKFFGVS----- 238

Query: 944 VNGCLH 961
           +NG LH
Sbjct: 239 LNGALH 244


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 53/200 (26%), Positives = 95/200 (47%)
 Frame = +2

Query: 281 EKLPREITTSILSRLPFKSIGQSRCVSKLWCTILSDSKSSRIPDILLVCRERGIPKIYYV 460
           + LPRE+ T ILSRLP +S+ + R  SK W +++     + +     +        I  V
Sbjct: 3   DHLPREVLTEILSRLPVRSLLRFRSTSKSWKSLIDSQHLNWLHLTRSLTLTSNTSLILRV 62

Query: 461 EDKEETFSQEPIEPFKTFDSRFLADSFYNYTYLVGFCNGFICLSQIKSLKNSSLPRNPIY 640
           +      +   ++P  + +   +   + N   L+G CNG +C+S +          + I 
Sbjct: 63  DSDLYQTNFPTLDPPVSLNHPLMC--YSNSITLLGSCNGLLCISNV---------ADDIA 111

Query: 641 LLNPVTGEHSALPHFTLPERDFPDKIEEGKKTDNCLSGFGFDNSTKKFKLVLVIFSARDY 820
             NP   +H  LP+  +P R  PD      +    + GFGFD+ T+ +KLV + +   D 
Sbjct: 112 FWNPSLRQHRILPYLPVPRRRHPDTTLFAAR----VCGFGFDHKTRDYKLVRISYFV-DL 166

Query: 821 GAQIFNNEVQVHTLGGDRWK 880
             + F+++V+++TL  + WK
Sbjct: 167 HDRSFDSQVKLYTLRANAWK 186


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 71/248 (28%), Positives = 107/248 (43%), Gaps = 20/248 (8%)
 Frame = +2

Query: 278 MEKLPREITTSILSRLPFKSIGQSRCVSKLWCTILSDS---------KSSRIPDILLVCR 430
           ME+LPR+I   ILSRLP  S+ Q R V + W  +  DS          +   P ++L C 
Sbjct: 27  MERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNPCLILHCD 86

Query: 431 ERGIPKIYYVEDKEETFSQEPIE----PFKTFDSRFLADSFYNYTYLVGFCNGFICLSQI 598
                +I +V+   E+  ++ +     PF      F          +VG CNG +CL+  
Sbjct: 87  YPIRNQISFVDISAESRDKDMVRKLTIPFWASMPEF---------EVVGSCNGLLCLA-- 135

Query: 599 KSLKNSSLPRNPIYLLNPVTGEHSALPHFTLPERDFPDKIEEGKKTDNCLSGFGFDNSTK 778
                 SL ++ +Y+ NP T +   LP        +PD+          + GFG+   T+
Sbjct: 136 -----DSLFKDAVYVHNPFTRDFKQLP----KSLQYPDQ--------EVVFGFGYHPMTE 178

Query: 779 KFKLVLVIFSARDYGA-------QIFNNEVQVHTLGGDRWKKKSGIVPDVLRHSYVTESI 937
            +K+V V++    YG            +EVQV TLG   W+    +   + R      S 
Sbjct: 179 VYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLDR----WPSE 234

Query: 938 ALVNGCLH 961
           ALVNG LH
Sbjct: 235 ALVNGRLH 242