BLASTX nr result
ID: Cimicifuga21_contig00029668
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00029668 (225 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524078.1| ring finger protein, putative [Ricinus commu... 108 4e-22 ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A... 103 1e-20 ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2... 102 3e-20 ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|2... 102 4e-20 ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like... 100 1e-19 >ref|XP_002524078.1| ring finger protein, putative [Ricinus communis] gi|223536646|gb|EEF38288.1| ring finger protein, putative [Ricinus communis] Length = 172 Score = 108 bits (271), Expect = 4e-22 Identities = 49/64 (76%), Positives = 53/64 (82%), Gaps = 2/64 (3%) Frame = -3 Query: 223 YPILLYSQAKLDNEDTSG--CSICLSDYKNMDSLRLLADCGHLFHVNCVDPWLRLHTTCP 50 YP LLYSQAKL N DT+ CSICL+DYK+ D LRLL DCGHLFH+ CVDPWLRLH TCP Sbjct: 87 YPKLLYSQAKLHNTDTTATCCSICLADYKSTDMLRLLPDCGHLFHLKCVDPWLRLHPTCP 146 Query: 49 VCRN 38 VCRN Sbjct: 147 VCRN 150 >ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis sativus] Length = 172 Score = 103 bits (258), Expect = 1e-20 Identities = 46/63 (73%), Positives = 51/63 (80%), Gaps = 2/63 (3%) Frame = -3 Query: 223 YPILLYSQAKLDNEDTSG--CSICLSDYKNMDSLRLLADCGHLFHVNCVDPWLRLHTTCP 50 YP LLYS+AKL D++ CSICL+DYKN D LRLL DCGHLFH+ CVDPWLRLH TCP Sbjct: 87 YPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCP 146 Query: 49 VCR 41 VCR Sbjct: 147 VCR 149 >ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1| predicted protein [Populus trichocarpa] Length = 154 Score = 102 bits (255), Expect = 3e-20 Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 2/63 (3%) Frame = -3 Query: 223 YPILLYSQAKLDNEDTSG--CSICLSDYKNMDSLRLLADCGHLFHVNCVDPWLRLHTTCP 50 YP LLYS+AKL D++ CSICL+DYK+ D LRLL DCGHLFH+ CVDPWLRLH TCP Sbjct: 73 YPTLLYSEAKLHKTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCVDPWLRLHPTCP 132 Query: 49 VCR 41 VCR Sbjct: 133 VCR 135 >ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|222854305|gb|EEE91852.1| predicted protein [Populus trichocarpa] Length = 146 Score = 102 bits (253), Expect = 4e-20 Identities = 45/63 (71%), Positives = 50/63 (79%), Gaps = 2/63 (3%) Frame = -3 Query: 223 YPILLYSQAKLDNEDTSG--CSICLSDYKNMDSLRLLADCGHLFHVNCVDPWLRLHTTCP 50 YP LLYS+AKL ++ CSICL+DYKN D LRLL DCGHLFH+ CVDPWLRLH TCP Sbjct: 65 YPTLLYSEAKLHKTGSTATCCSICLADYKNTDKLRLLPDCGHLFHLRCVDPWLRLHPTCP 124 Query: 49 VCR 41 VCR Sbjct: 125 VCR 127 >ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera] Length = 169 Score = 100 bits (250), Expect = 1e-19 Identities = 43/63 (68%), Positives = 52/63 (82%), Gaps = 2/63 (3%) Frame = -3 Query: 223 YPILLYSQAKLDNEDTSG--CSICLSDYKNMDSLRLLADCGHLFHVNCVDPWLRLHTTCP 50 YP ++YS+AKL ++D++ CSICL+DYK D LRLL DCGHLFH+ CVDPWLRLH TCP Sbjct: 84 YPKMVYSEAKLQHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDPWLRLHPTCP 143 Query: 49 VCR 41 VCR Sbjct: 144 VCR 146