BLASTX nr result

ID: Cimicifuga21_contig00029668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029668
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...   108   4e-22
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...   103   1e-20
ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like...   100   1e-19

>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score =  108 bits (271), Expect = 4e-22
 Identities = 49/64 (76%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
 Frame = -3

Query: 223 YPILLYSQAKLDNEDTSG--CSICLSDYKNMDSLRLLADCGHLFHVNCVDPWLRLHTTCP 50
           YP LLYSQAKL N DT+   CSICL+DYK+ D LRLL DCGHLFH+ CVDPWLRLH TCP
Sbjct: 87  YPKLLYSQAKLHNTDTTATCCSICLADYKSTDMLRLLPDCGHLFHLKCVDPWLRLHPTCP 146

Query: 49  VCRN 38
           VCRN
Sbjct: 147 VCRN 150


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/63 (73%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
 Frame = -3

Query: 223 YPILLYSQAKLDNEDTSG--CSICLSDYKNMDSLRLLADCGHLFHVNCVDPWLRLHTTCP 50
           YP LLYS+AKL   D++   CSICL+DYKN D LRLL DCGHLFH+ CVDPWLRLH TCP
Sbjct: 87  YPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCP 146

Query: 49  VCR 41
           VCR
Sbjct: 147 VCR 149


>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  102 bits (255), Expect = 3e-20
 Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
 Frame = -3

Query: 223 YPILLYSQAKLDNEDTSG--CSICLSDYKNMDSLRLLADCGHLFHVNCVDPWLRLHTTCP 50
           YP LLYS+AKL   D++   CSICL+DYK+ D LRLL DCGHLFH+ CVDPWLRLH TCP
Sbjct: 73  YPTLLYSEAKLHKTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCVDPWLRLHPTCP 132

Query: 49  VCR 41
           VCR
Sbjct: 133 VCR 135


>ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|222854305|gb|EEE91852.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/63 (71%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
 Frame = -3

Query: 223 YPILLYSQAKLDNEDTSG--CSICLSDYKNMDSLRLLADCGHLFHVNCVDPWLRLHTTCP 50
           YP LLYS+AKL    ++   CSICL+DYKN D LRLL DCGHLFH+ CVDPWLRLH TCP
Sbjct: 65  YPTLLYSEAKLHKTGSTATCCSICLADYKNTDKLRLLPDCGHLFHLRCVDPWLRLHPTCP 124

Query: 49  VCR 41
           VCR
Sbjct: 125 VCR 127


>ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera]
          Length = 169

 Score =  100 bits (250), Expect = 1e-19
 Identities = 43/63 (68%), Positives = 52/63 (82%), Gaps = 2/63 (3%)
 Frame = -3

Query: 223 YPILLYSQAKLDNEDTSG--CSICLSDYKNMDSLRLLADCGHLFHVNCVDPWLRLHTTCP 50
           YP ++YS+AKL ++D++   CSICL+DYK  D LRLL DCGHLFH+ CVDPWLRLH TCP
Sbjct: 84  YPKMVYSEAKLQHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDPWLRLHPTCP 143

Query: 49  VCR 41
           VCR
Sbjct: 144 VCR 146


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