BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029665
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus c...    80   1e-13
ref|XP_003592245.1| Double-stranded RNA binding protein [Medicag...    78   7e-13
ref|XP_003601344.1| Double-stranded RNA binding protein [Medicag...    75   6e-12
ref|XP_003592247.1| hypothetical protein MTR_1g100710 [Medicago ...    75   6e-12

>ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|222858085|gb|EEE95632.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/68 (58%), Positives = 49/68 (72%)
 Frame = -3

Query: 403 MYKSKLQELCQQKLGSQPMYSSNCDGPAHSPRFKASVVVNGESFGSTDFYKSSKQAQNEA 224
           MYKSKLQELCQQ+    P Y S+  G AH+PRF A+V VN  SF S     +SK+AQN+A
Sbjct: 1   MYKSKLQELCQQRAWELPTYESSRQGQAHNPRFLATVTVNNISFHSPSPSNTSKKAQNDA 60

Query: 223 ARLAFEHF 200
           A+LA+EHF
Sbjct: 61  AKLAYEHF 68



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/66 (37%), Positives = 44/66 (66%)
 Frame = -3

Query: 409 KKMYKSKLQELCQQKLGSQPMYSSNCDGPAHSPRFKASVVVNGESFGSTDFYKSSKQAQN 230
           ++++KS+LQ   Q++  + P+YS    GP HS RFK  V VNG++F S +++ +  +A++
Sbjct: 85  QRLFKSQLQTYAQKRNFALPVYSCERVGPPHSSRFKCKVTVNGQTFESLEYFSTLNKAEH 144

Query: 229 EAARLA 212
            AA+ A
Sbjct: 145 AAAKAA 150


>ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus communis]
           gi|223535011|gb|EEF36694.1| hypothetical protein
           RCOM_1321840 [Ricinus communis]
          Length = 162

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/68 (60%), Positives = 49/68 (72%)
 Frame = -3

Query: 403 MYKSKLQELCQQKLGSQPMYSSNCDGPAHSPRFKASVVVNGESFGSTDFYKSSKQAQNEA 224
           MYK+KLQELC QK  S P YS+   G  H+P F A+V+VNG SF S+   KSSK AQN A
Sbjct: 1   MYKTKLQELCHQKTWSLPEYSTTKVGQDHNPIFHATVIVNGYSFSSSSPSKSSKLAQNNA 60

Query: 223 ARLAFEHF 200
           A+LAF+HF
Sbjct: 61  AKLAFDHF 68


>ref|XP_003592245.1| Double-stranded RNA binding protein [Medicago truncatula]
           gi|357462121|ref|XP_003601342.1| Double-stranded RNA
           binding protein [Medicago truncatula]
           gi|355481293|gb|AES62496.1| Double-stranded RNA binding
           protein [Medicago truncatula]
           gi|355490390|gb|AES71593.1| Double-stranded RNA binding
           protein [Medicago truncatula]
          Length = 424

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/68 (52%), Positives = 49/68 (72%)
 Frame = -3

Query: 403 MYKSKLQELCQQKLGSQPMYSSNCDGPAHSPRFKASVVVNGESFGSTDFYKSSKQAQNEA 224
           M+K+KLQ+LC Q+  S P Y++  DGP H P F ASV VNG +F S+D + S+K+AQN+A
Sbjct: 1   MFKTKLQQLCHQRRWSLPKYTATNDGPQHKPSFNASVHVNGVTFASSDAFNSAKEAQNQA 60

Query: 223 ARLAFEHF 200
           A  AF +F
Sbjct: 61  AMKAFRNF 68


>ref|XP_003601344.1| Double-stranded RNA binding protein [Medicago truncatula]
           gi|355490392|gb|AES71595.1| Double-stranded RNA binding
           protein [Medicago truncatula]
          Length = 372

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
 Frame = -3

Query: 403 MYKSKLQELCQQKLGSQPMYSS-NCDGPAHSPRFKASVVVNGESFGSTDFYKSSKQAQNE 227
           M+KSKLQELC ++  S P YS+ + DGP H+P FK SV VNG +F S+D + SS +AQN+
Sbjct: 1   MHKSKLQELCHRRRWSLPKYSAFHVDGPPHNPSFKGSVFVNGLTFTSSDTFNSSGEAQNQ 60

Query: 226 AARLAFEHF 200
           AA  AF +F
Sbjct: 61  AAMKAFRNF 69


>ref|XP_003592247.1| hypothetical protein MTR_1g100710 [Medicago truncatula]
           gi|355481295|gb|AES62498.1| hypothetical protein
           MTR_1g100710 [Medicago truncatula]
          Length = 257

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
 Frame = -3

Query: 403 MYKSKLQELCQQKLGSQPMYSS-NCDGPAHSPRFKASVVVNGESFGSTDFYKSSKQAQNE 227
           M+KSKLQELC ++  S P YS+ + DGP H+P FK SV VNG +F S+D + SS +AQN+
Sbjct: 1   MHKSKLQELCHRRRWSLPKYSAFHVDGPPHNPSFKGSVFVNGLTFTSSDTFNSSGEAQNQ 60

Query: 226 AARLAFEHF 200
           AA  AF +F
Sbjct: 61  AAMKAFRNF 69