BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029627
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004564114.1| photosystem I assembly protein ycf4 [Nelumbo...   166   1e-39
ref|YP_740576.1| photosystem I assembly protein ycf4 [Platanus o...   166   1e-39
gb|ADD30785.1| photosystem I assembly protein ycf4 [Liquidambar ...   166   2e-39
ref|YP_002836101.1| photosystem I assembly protein ycf4 [Megaler...   166   2e-39
ref|YP_002608341.1| ycf4 [Vitis vinifera] gi|209954137|emb|CAQ77...   166   2e-39

>ref|YP_004564114.1| photosystem I assembly protein ycf4 [Nelumbo nucifera]
           gi|224474233|gb|ACN49419.1| photosystem I assembly
           protein ycf4 [Nelumbo nucifera]
           gi|290488778|gb|ADD30773.1| photosystem I assembly
           protein ycf4 [Nelumbo nucifera]
           gi|383286808|gb|AFH01458.1| photosystem I assembly
           protein ycf4 (chloroplast) [Nelumbo nucifera]
          Length = 184

 Score =  166 bits (421), Expect = 1e-39
 Identities = 89/127 (70%), Positives = 91/127 (71%)
 Frame = -1

Query: 381 YLGRNLISLFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKKRNS 202
           YLGRNLISLFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRK+   
Sbjct: 43  YLGRNLISLFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIV 102

Query: 201 VYFSLGIPWKKSSHLPSIPYERYSVD*NXXXXXXXXXRVLYMEIRGQGAVPLTRTDENLT 22
             F  G P K                           RVLYMEIRGQGA+PLTRTDENLT
Sbjct: 103 CIFRWGFPGKNRRIFLRFLMRDIQSIRIEVKEGIYPRRVLYMEIRGQGAIPLTRTDENLT 162

Query: 21  PREIEQK 1
           PREIEQK
Sbjct: 163 PREIEQK 169


>ref|YP_740576.1| photosystem I assembly protein ycf4 [Platanus occidentalis]
           gi|122166025|sp|Q09G35.1|YCF4_PLAOC RecName:
           Full=Photosystem I assembly protein Ycf4
           gi|114054395|gb|ABI49789.1| photosystem I assembly
           protein ycf4 [Platanus occidentalis]
          Length = 184

 Score =  166 bits (421), Expect = 1e-39
 Identities = 91/132 (68%), Positives = 95/132 (71%), Gaps = 5/132 (3%)
 Frame = -1

Query: 381 YLGRNLISLFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKKRNS 202
           YLGRNLISLFPSQQI+FFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRK+   
Sbjct: 43  YLGRNLISLFPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIV 102

Query: 201 VYFSLGIPWKKSS-----HLPSIPYERYSVD*NXXXXXXXXXRVLYMEIRGQGAVPLTRT 37
             F  G P K         +  I   R  V            RVLYMEIRGQGA+PLTRT
Sbjct: 103 CIFRWGFPGKNRRIFLRFFMKDIQSIRIEV-----KEGLYPRRVLYMEIRGQGAIPLTRT 157

Query: 36  DENLTPREIEQK 1
           DENLTPREIEQK
Sbjct: 158 DENLTPREIEQK 169


>gb|ADD30785.1| photosystem I assembly protein ycf4 [Liquidambar styraciflua]
          Length = 184

 Score =  166 bits (420), Expect = 2e-39
 Identities = 88/127 (69%), Positives = 92/127 (72%)
 Frame = -1

Query: 381 YLGRNLISLFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKKRNS 202
           YLGRNLISLFPSQQI+FFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRK+   
Sbjct: 43  YLGRNLISLFPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIV 102

Query: 201 VYFSLGIPWKKSSHLPSIPYERYSVD*NXXXXXXXXXRVLYMEIRGQGAVPLTRTDENLT 22
             F  G P K          +                RVLYMEIRGQGA+PLTRTDENLT
Sbjct: 103 CIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYMEIRGQGAIPLTRTDENLT 162

Query: 21  PREIEQK 1
           PREIEQK
Sbjct: 163 PREIEQK 169


>ref|YP_002836101.1| photosystem I assembly protein ycf4 [Megaleranthis saniculifolia]
           gi|226933893|gb|ACO92026.1| photosystem I assembly
           protein ycf4 [Megaleranthis saniculifolia]
          Length = 184

 Score =  166 bits (420), Expect = 2e-39
 Identities = 89/127 (70%), Positives = 91/127 (71%)
 Frame = -1

Query: 381 YLGRNLISLFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKKRNS 202
           YLGRNLISLFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKK   
Sbjct: 43  YLGRNLISLFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKKGIV 102

Query: 201 VYFSLGIPWKKSSHLPSIPYERYSVD*NXXXXXXXXXRVLYMEIRGQGAVPLTRTDENLT 22
             F  G P +                           RVLYMEIRGQG+VPLTRTDENLT
Sbjct: 103 CIFRWGFPGRNRRIFLRFLMRDIQSIRIEVKEGIYPRRVLYMEIRGQGSVPLTRTDENLT 162

Query: 21  PREIEQK 1
           PREIEQK
Sbjct: 163 PREIEQK 169


>ref|YP_002608341.1| ycf4 [Vitis vinifera] gi|209954137|emb|CAQ77562.1| ycf4 [Vitis
           vinifera]
          Length = 183

 Score =  166 bits (420), Expect = 2e-39
 Identities = 88/128 (68%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = -1

Query: 381 YLGRNLISLFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKKRNS 202
           YLGRNLISLFPSQQI+FFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRK+   
Sbjct: 43  YLGRNLISLFPSQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIV 102

Query: 201 VYFSLGIPWK-KSSHLPSIPYERYSVD*NXXXXXXXXXRVLYMEIRGQGAVPLTRTDENL 25
             F  G P K +   L  +  +  S+             VLYMEIRGQGA+PLTRTDENL
Sbjct: 103 CIFRWGFPGKNRRIFLRLLMKDIQSI--RIAVKEDIYALVLYMEIRGQGAIPLTRTDENL 160

Query: 24  TPREIEQK 1
           TPRE+EQK
Sbjct: 161 TPREMEQK 168