BLASTX nr result

ID: Cimicifuga21_contig00029605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029605
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277015.2| PREDICTED: uncharacterized protein LOC100261...    66   3e-09
ref|XP_002280726.1| PREDICTED: probable receptor-like protein ki...    61   8e-08
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]    60   2e-07
ref|XP_002332866.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002277015.2| PREDICTED: uncharacterized protein LOC100261246 [Vitis vinifera]
          Length = 1963

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +1

Query: 10   RCNVNVKIHALQTLVQSFTSFGSTLENVMRSGFDVEYAMNVSFCNGCEASGGQCGYDANI 189
            RC  +  +  L + V+   +    +E  +  GF+V++  N S C GC  SGG+CGYD N+
Sbjct: 1211 RCGYSALLPVLGSAVEGLMNGSLDVEKALSKGFEVKWTANESQCEGCMESGGRCGYDRNL 1270

Query: 190  -VSTCFCHDHPYQES 231
               +CFC D PY ES
Sbjct: 1271 NTPSCFCRDRPYPES 1285



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = +1

Query: 13  CNVNVKIHALQTLVQSFTSFGSTLENVMRSGFDVEYAMNVSFCNGCEASGGQCGYD-ANI 189
           C   V +  L T  Q F +     + V++ GF+V++ +    C GC  SGG+CGY+ ++ 
Sbjct: 180 CGAGVVVPVLATAAQGFMNHSLAFDQVLKEGFEVKWTVEEGQCRGCAESGGRCGYNLSSS 239

Query: 190 VSTCFCHDHPYQESYCPT 243
             +C+C D PY  S CPT
Sbjct: 240 QPSCYCPDKPYSTS-CPT 256



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = +1

Query: 10  RCNVNVKIHALQTLVQSFTSFGSTLENVMRSGFDVEYAMNVSF-CNGCEASGGQCGYDAN 186
           +C   V I  L T  Q+  +    ++ ++R GF+VE+ +     C  C  SGG CGYD N
Sbjct: 713 KCGERVVIPVLGTAAQALLNHSLGVDGLLREGFEVEWEVEEEEECGECVESGGGCGYDWN 772

Query: 187 I-VSTCFCHDHPYQESYCP 240
           + +  C+C D PY  S CP
Sbjct: 773 LNMLICYCRDKPYSTS-CP 790


>ref|XP_002280726.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Vitis vinifera]
          Length = 545

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   DLLRCNVNVKIHALQTLVQSFTSFGSTLENVMRSGFDVEYAMNVSFCNGCEASGGQCGYD 180
           +L  CNV++ +  L + V +  +  ++LE V+  GF+V + ++ + C+ C  SGG+CGY+
Sbjct: 57  NLGNCNVSITVPVLPSAVSAIINNSASLEQVLNDGFEVLWIIDDTACSECMGSGGRCGYN 116

Query: 181 -ANIVSTCFCHDHPYQESYCPTRP 249
            ++    CFC D PY    CP  P
Sbjct: 117 TSHFQPICFCSDQPYL-LRCPALP 139


>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
          Length = 1379

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1    DLLRCNVNVKIHALQTLVQSFTSFGSTLENVMRSGFDVEYAMNVSFCNGCEASGGQCGYD 180
            +L  CNV++ +  L + V +  +  ++LE V+  GF+V   ++ + C+ C  SGG+CGY+
Sbjct: 904  NLGNCNVSITVPVLPSAVSAJINNSASLEQVLNDGFEVLXIIDDTACSECMGSGGRCGYN 963

Query: 181  -ANIVSTCFCHDHPYQESYCPTRP 249
             ++    CFC D PY    CP  P
Sbjct: 964  TSHFQPICFCSDQPYL-LRCPALP 986


>ref|XP_002332866.1| predicted protein [Populus trichocarpa] gi|222833668|gb|EEE72145.1|
           predicted protein [Populus trichocarpa]
          Length = 661

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
 Frame = +1

Query: 4   LLRCNVNVKIHALQTLVQSFTSFGSTLE--NVMRSGFDVEYAMNVSFCNGCEASGGQCGY 177
           L  CN +VK+ ALQ+ V    +  +  +    +  GF++ ++ N S C+ C++SGG CGY
Sbjct: 178 LTTCNNSVKVPALQSAVMPILANPTVAQLLGAINQGFELVWSANDSLCDTCKSSGGLCGY 237

Query: 178 DANIVS-TCFCHDHPYQESYCPTRP 249
           +    + TC+C D P Q+  C   P
Sbjct: 238 NQTTTAFTCYCADQP-QDFECSASP 261


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