BLASTX nr result

ID: Cimicifuga21_contig00029602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029602
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530179.1| Disease resistance protein RPM1, putative [R...    85   5e-15
gb|AFC90667.1| nucleotide-binding site leucine-rich repeat prote...    85   7e-15
gb|AFC90572.1| nucleotide-binding site leucine-rich repeat prote...    85   7e-15
gb|AFC90267.1| nucleotide-binding site leucine-rich repeat prote...    83   2e-14
ref|XP_002329157.1| BED finger-nbs resistance protein [Populus t...    82   3e-14

>ref|XP_002530179.1| Disease resistance protein RPM1, putative [Ricinus communis]
           gi|223530298|gb|EEF32193.1| Disease resistance protein
           RPM1, putative [Ricinus communis]
          Length = 969

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/90 (48%), Positives = 56/90 (62%)
 Frame = -3

Query: 273 IAKQVDLDLSSEQDEAXXXXXXXXXXXRMGRIVFILDDMWEALSLHKIGIPDFTKDNGSK 94
           IAK +D D+S E DE               + V ILDD+WE  SL  +GIP  +K+NG K
Sbjct: 206 IAKAIDRDISIEDDEKKRAALLWNALSNKQKFVLILDDLWENFSLENVGIP-ISKENGCK 264

Query: 93  LVLTSRLLEVCQMMECKKAIKVELLAEEEA 4
           L+ TSR LEVC  M+C++ IKVE L+EEEA
Sbjct: 265 LIFTSRSLEVCNKMDCRRKIKVEPLSEEEA 294


>gb|AFC90667.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/91 (47%), Positives = 60/91 (65%)
 Frame = -3

Query: 273 IAKQVDLDLSSEQDEAXXXXXXXXXXXRMGRIVFILDDMWEALSLHKIGIPDFTKDNGSK 94
           IAK ++L    ++DE            R  + V ILDD+WE+ +L ++GIP+ T+ NG K
Sbjct: 40  IAKALNLSFRDDEDETIRASELYAALFRKKKYVLILDDLWESFALERVGIPEPTRSNGCK 99

Query: 93  LVLTSRLLEVCQMMECKKAIKVELLAEEEAR 1
           +VLT+RLLEVC+ M C K +KVELL E+EAR
Sbjct: 100 IVLTTRLLEVCRRMHCTK-VKVELLTEQEAR 129


>gb|AFC90572.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 264

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/91 (46%), Positives = 60/91 (65%)
 Frame = -3

Query: 273 IAKQVDLDLSSEQDEAXXXXXXXXXXXRMGRIVFILDDMWEALSLHKIGIPDFTKDNGSK 94
           IAK ++L    ++DE            +  + V ILDD+WE+ +L ++GIP+ T+ NG K
Sbjct: 40  IAKALNLSFRDDEDETIRASELYAALFQKKKYVLILDDLWESFALERVGIPEPTRSNGCK 99

Query: 93  LVLTSRLLEVCQMMECKKAIKVELLAEEEAR 1
           +VLT+RLLEVC+ M C K +KVELL E+EAR
Sbjct: 100 IVLTTRLLEVCRRMHCTK-VKVELLTEQEAR 129


>gb|AFC90267.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron kanehirai]
          Length = 299

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/90 (46%), Positives = 60/90 (66%)
 Frame = -3

Query: 273 IAKQVDLDLSSEQDEAXXXXXXXXXXXRMGRIVFILDDMWEALSLHKIGIPDFTKDNGSK 94
           IAK+++  LS +QD+            +  R V I+DD+W++ SL K+GIP+  + NG K
Sbjct: 44  IAKELNFSLSDDQDKRRRASQLYEALSQQKRYVLIIDDLWKSFSLEKVGIPEPIRSNGCK 103

Query: 93  LVLTSRLLEVCQMMECKKAIKVELLAEEEA 4
           LVLT+R LEVC+ MEC K ++V+LL EEEA
Sbjct: 104 LVLTTRSLEVCRRMEC-KPVQVDLLTEEEA 132


>ref|XP_002329157.1| BED finger-nbs resistance protein [Populus trichocarpa]
           gi|222869826|gb|EEF06957.1| BED finger-nbs resistance
           protein [Populus trichocarpa]
          Length = 205

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/90 (48%), Positives = 57/90 (63%)
 Frame = -3

Query: 273 IAKQVDLDLSSEQDEAXXXXXXXXXXXRMGRIVFILDDMWEALSLHKIGIPDFTKDNGSK 94
           IAK ++LDLS+E+DE              G+ V ILDD+W    L K+GIP   + N  K
Sbjct: 44  IAKAINLDLSNEEDENRRAAKLSKALVAKGKSVLILDDLWNHFLLEKVGIP--VEVNACK 101

Query: 93  LVLTSRLLEVCQMMECKKAIKVELLAEEEA 4
           L+LT+R LEVC+ M C++ IKVELL EEEA
Sbjct: 102 LILTTRSLEVCRRMGCREIIKVELLTEEEA 131


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