BLASTX nr result

ID: Cimicifuga21_contig00029588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029588
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282530.2| PREDICTED: UPF0481 protein At3g47200-like [V...    64   1e-08
ref|XP_002332980.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
emb|CBI30411.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002303887.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|NP_197646.1| uncharacterized protein [Arabidopsis thaliana] ...    62   5e-08

>ref|XP_002282530.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 467

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
 Frame = -1

Query: 320 GKSDYISINMDEDGNRLLAADIINNIPAMR--SSLSFIYRVPDKLRVLNMKKYEPRIVSI 147
           GK D+ S  M +  ++ +A  +   +  +   S+   IYRVP KLR +NM+ Y PR+VSI
Sbjct: 25  GKEDHASDEMLKKSSKEVATSLQGRLDRLTPLSATCCIYRVPQKLRKVNMEAYTPRVVSI 84

Query: 146 GPFHCNKENLIITEKHKKWYMCDLITRCMPEKTSFQDIVKVV 21
           GP H  +E+LI  E+HK  Y+ + + R    + + ++ V+++
Sbjct: 85  GPLHHGEEHLIAMEEHKLRYLQNFLHR---TRKTLEECVEII 123


>ref|XP_002332980.1| predicted protein [Populus trichocarpa] gi|222834311|gb|EEE72788.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/100 (39%), Positives = 56/100 (56%)
 Frame = -1

Query: 317 KSDYISINMDEDGNRLLAADIINNIPAMRSSLSFIYRVPDKLRVLNMKKYEPRIVSIGPF 138
           +SD +S++++E  N L        I    S    IYRVP++LR LN K Y PR+VSIGP 
Sbjct: 3   QSDEVSLDINELANSLREQ---LKIKKAFSQACCIYRVPERLRKLNEKAYTPRVVSIGPL 59

Query: 137 HCNKENLIITEKHKKWYMCDLITRCMPEKTSFQDIVKVVR 18
           H  KENL   E HK  Y+   + + +    S +D+V V++
Sbjct: 60  HHGKENLKAMEDHKIMYLQQFLEQNL--LVSVEDLVYVIK 97


>emb|CBI30411.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/75 (45%), Positives = 45/75 (60%)
 Frame = -1

Query: 233 RSSLSFIYRVPDKLRVLNMKKYEPRIVSIGPFHCNKENLIITEKHKKWYMCDLITRCMPE 54
           RS    IY+VP+KLR +N + Y PRIVSIGPFH  K +L+  E+HK  YM  L+ R    
Sbjct: 54  RSMNLSIYKVPNKLRHVNEEAYSPRIVSIGPFHQGKRDLLAMEEHKWRYMLSLVHRTPNP 113

Query: 53  KTSFQDIVKVVRGLE 9
           + S  +  K +  LE
Sbjct: 114 EKSLDECGKSIIELE 128


>ref|XP_002303887.1| predicted protein [Populus trichocarpa]
           gi|224098234|ref|XP_002334569.1| predicted protein
           [Populus trichocarpa] gi|222841319|gb|EEE78866.1|
           predicted protein [Populus trichocarpa]
           gi|222873183|gb|EEF10314.1| predicted protein [Populus
           trichocarpa]
          Length = 428

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
 Frame = -1

Query: 317 KSDYISINMDEDGNRLLAADIINNIPAMR--SSLSFIYRVPDKLRVLNMKKYEPRIVSIG 144
           +SD +S++++E     LA  +   +   +  S    IYRVP++LR LN K Y PR+VSIG
Sbjct: 3   QSDEVSLDVNE-----LAISLREQLKIKKAFSLACCIYRVPERLRKLNEKAYTPRVVSIG 57

Query: 143 PFHCNKENLIITEKHKKWYMCDLITRCMPEKTSFQDIVKVVRGLELE 3
           P H  KENL   E HK  Y+   + + +    S +D++ +++  E E
Sbjct: 58  PIHHGKENLKAMEDHKIMYLQQFLEQNL--LVSVEDLINIIKENETE 102


>ref|NP_197646.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758660|dbj|BAB09126.1| unnamed protein product
           [Arabidopsis thaliana] gi|45825141|gb|AAS77478.1|
           At5g22540 [Arabidopsis thaliana]
           gi|110741358|dbj|BAF02229.1| hypothetical protein
           [Arabidopsis thaliana] gi|332005655|gb|AED93038.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 440

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/74 (40%), Positives = 47/74 (63%)
 Frame = -1

Query: 230 SSLSFIYRVPDKLRVLNMKKYEPRIVSIGPFHCNKENLIITEKHKKWYMCDLITRCMPEK 51
           S L  I R+P  L  +N+K YEP+IVSIGP+H  KE+L +T++HK+ ++   + +   + 
Sbjct: 28  SELCCIVRIPQSLARINLKAYEPKIVSIGPYHHGKEHLKMTQQHKRRFLKFFVAKMEEKG 87

Query: 50  TSFQDIVKVVRGLE 9
              Q++VK V  LE
Sbjct: 88  FVPQELVKAVSSLE 101


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