BLASTX nr result

ID: Cimicifuga21_contig00029583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029583
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515949.1| Stem 28 kDa glycoprotein precursor, putative...   145   4e-33
ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28
dbj|BAJ34931.1| hypothetical protein [Vitis hybrid cultivar]          128   5e-28
ref|XP_003632911.1| PREDICTED: acid phosphatase 1-like [Vitis vi...   125   3e-27
emb|CAN82027.1| hypothetical protein VITISV_000612 [Vitis vinifera]   125   3e-27

>ref|XP_002515949.1| Stem 28 kDa glycoprotein precursor, putative [Ricinus communis]
           gi|223544854|gb|EEF46369.1| Stem 28 kDa glycoprotein
           precursor, putative [Ricinus communis]
          Length = 258

 Score =  145 bits (365), Expect = 4e-33
 Identities = 72/114 (63%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   LLSFLILCTILTTSQAFSQGGITLAIHLLRPKHGSGGG-IHGVSCSSWRFAVETNNIHDW 178
           L   L L  IL TS   S+ G+   IHLLRP+ G+ G  + GVSC SWR  VETNNI  W
Sbjct: 3   LFQLLFLAIILATSHG-SEMGVPHQIHLLRPQSGTAGHHVPGVSCLSWRLGVETNNIIGW 61

Query: 179 KTVPTECEGYVGHYMLGIPYRKDCKIVADEAALYAQTIKLKGDGKDVWVFDIDE 340
            TVP ECEGYVGHYMLG  YRKD KI+ADEA LYA++++L GDGKD+WVFDIDE
Sbjct: 62  TTVPAECEGYVGHYMLGHQYRKDSKIIADEAFLYAKSLELSGDGKDIWVFDIDE 115


>ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Vitis vinifera]
          Length = 990

 Score =  128 bits (321), Expect = 5e-28
 Identities = 63/113 (55%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
 Frame = +2

Query: 5   LSFLILCTILTTSQAFSQGGITLAIHLLRPKHGSGGG-IHGVSCSSWRFAVETNNIHDWK 181
           +  L+    L  S      GI+L IHLLRP+ GS G  + G+SC SWR  VET+NI +W 
Sbjct: 546 MGVLVQLLFLLASTVELSPGISLEIHLLRPQLGSSGHHVPGLSCLSWRLGVETHNIIEWS 605

Query: 182 TVPTECEGYVGHYMLGIPYRKDCKIVADEAALYAQTIKLKGDGKDVWVFDIDE 340
           TVP  CE YVGHYMLG  YRKD  +V  EA  +AQ++KL GDGKD+WVFDIDE
Sbjct: 606 TVPQACESYVGHYMLGDQYRKDSGVVVYEAITHAQSLKLAGDGKDIWVFDIDE 658



 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/94 (60%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
 Frame = +2

Query: 62   GITLAIHLLRPKHGSGGG-IHGVSCSSWRFAVETNNIHDWKTVPTECEGYVGHYMLGIPY 238
            GI+  IHLLRP+ GS G  + G+SC SWR  VE +NI +W TVP  CE YVGHYMLG  Y
Sbjct: 812  GISHEIHLLRPQLGSSGHHVPGLSCLSWRLGVEAHNIIEWSTVPQACESYVGHYMLGHQY 871

Query: 239  RKDCKIVADEAALYAQTIKLKGDGKDVWVFDIDE 340
            RKD + V  EA  YAQ++KL  DGKD+WVFD+DE
Sbjct: 872  RKDSRAVVYEALTYAQSLKLAVDGKDIWVFDVDE 905


>dbj|BAJ34931.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 237

 Score =  128 bits (321), Expect = 5e-28
 Identities = 61/94 (64%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
 Frame = +2

Query: 62  GITLAIHLLRPKHGSGGG-IHGVSCSSWRFAVETNNIHDWKTVPTECEGYVGHYMLGIPY 238
           GI+  IHLLRP+ GSGG     +SC SWR AVETNNI +W+TVP  CE YVGHYMLG  Y
Sbjct: 2   GISHEIHLLRPRLGSGGHPASNLSCPSWRLAVETNNIINWETVPQACESYVGHYMLGHQY 61

Query: 239 RKDCKIVADEAALYAQTIKLKGDGKDVWVFDIDE 340
           R+D ++V  EA  YA+++KL GDGKDVWVFDIDE
Sbjct: 62  RQDSRVVVYEAIAYAESLKLGGDGKDVWVFDIDE 95


>ref|XP_003632911.1| PREDICTED: acid phosphatase 1-like [Vitis vinifera]
          Length = 255

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/96 (63%), Positives = 73/96 (76%), Gaps = 3/96 (3%)
 Frame = +2

Query: 62  GITLAIHLLRPKHGSGGGIH---GVSCSSWRFAVETNNIHDWKTVPTECEGYVGHYMLGI 232
           GI+  IHLLRP+  SG  +H   G+SC SWR AVETNNI +W+TVP  CE YVGHYMLG 
Sbjct: 20  GISHEIHLLRPRLASG--VHPASGLSCPSWRLAVETNNIINWETVPQACESYVGHYMLGH 77

Query: 233 PYRKDCKIVADEAALYAQTIKLKGDGKDVWVFDIDE 340
            YR+D ++V  EA  YA+++KL GDGKDVWVFDIDE
Sbjct: 78  QYRQDSRVVVYEAIAYAESLKLGGDGKDVWVFDIDE 113


>emb|CAN82027.1| hypothetical protein VITISV_000612 [Vitis vinifera]
          Length = 255

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/113 (55%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
 Frame = +2

Query: 5   LSFLILCTILTTSQAFSQGGITLAIHLLRPKHGSGGG-IHGVSCSSWRFAVETNNIHDWK 181
           +  L+    L  S      GI+L IHLLRP+ GS G  + G+SC SWR  VET+NI +W 
Sbjct: 1   MGVLVQLLFLLASTVELSPGISLEIHLLRPQLGSSGHHVPGLSCLSWRLGVETHNIIEWS 60

Query: 182 TVPTECEGYVGHYMLGIPYRKDCKIVADEAALYAQTIKLKGDGKDVWVFDIDE 340
           TVP  CE YVGHYMLG  YRKD   V  EA  +AQ++KL GDGKD+WVFDIDE
Sbjct: 61  TVPQVCESYVGHYMLGDQYRKDSGAVVYEAISHAQSLKLAGDGKDIWVFDIDE 113


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