BLASTX nr result

ID: Cimicifuga21_contig00029581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029581
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510111.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
emb|CBI19417.3| unnamed protein product [Vitis vinifera]               96   7e-18
ref|NP_001236322.1| uncharacterized protein LOC100527200 precurs...    89   8e-16
ref|XP_002320697.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-15
ref|NP_001237132.1| uncharacterized protein LOC100527002 precurs...    83   3e-14

>ref|XP_002510111.1| conserved hypothetical protein [Ricinus communis]
           gi|223550812|gb|EEF52298.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score =  100 bits (249), Expect = 2e-19
 Identities = 56/120 (46%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
 Frame = -1

Query: 558 MRPFGILVLFVVVGTAFTFIAFS----SNSSFHADIVFPACEDSATLITHNRKLKEK-FN 394
           M+  GI   + VVGTA  F   S    S S   +D+ F        +   +RKLKE  + 
Sbjct: 1   MKVSGIWFSYFVVGTALMFFNLSCTTTSTSLSISDVFFTGRGGELIMTATSRKLKENNYY 60

Query: 393 PSTKKRGNNENLNFEDYHLIDPVPSSKASIRHKPIAHGSPLMPFIPKPAPPTPSPQRNDG 214
           PST K+G+   LN +DYH IDPVPSSKASI+  PI HG+PL PFIPKP+ P+P+P +  G
Sbjct: 61  PSTDKKGDTSLLNLDDYHPIDPVPSSKASIKPGPIEHGTPLNPFIPKPSAPSPAPPKKVG 120


>emb|CBI19417.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 55/105 (52%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
 Frame = -1

Query: 546 GILVLFVVVGTAFTFIAFSSNSSFHADIVFPACEDSATLITHNRKLKE---KFNPSTKKR 376
           G  VLF+VVGT F F+  S +S    D+VF     SAT+   +RKLK    + N  T K+
Sbjct: 6   GFWVLFLVVGTPFMFLHCSGSSI--PDMVFTHHVGSATMKATSRKLKVNGYEHNLGTDKK 63

Query: 375 GNNENLNFEDYHLIDPVPSSKASIRHKPIAHGSPLMPFIPKPAPP 241
               N+N EDYH IDPVPSSKASI+  PI HG+PL+P+IPKP+PP
Sbjct: 64  IIAGNVNLEDYHPIDPVPSSKASIKPGPIQHGTPLIPYIPKPSPP 108


>ref|NP_001236322.1| uncharacterized protein LOC100527200 precursor [Glycine max]
           gi|255631770|gb|ACU16252.1| unknown [Glycine max]
          Length = 124

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 9/115 (7%)
 Frame = -1

Query: 546 GILVLFVVVGTAFTFIAFSSNS--SFHADIVFPACEDSATLITHNRKLKEKFNPSTKKRG 373
           G  VL +VVG   +F+ F S +  S+ +D++   C D ATLI  +RKLKE  + + K R 
Sbjct: 6   GFFVLLLVVGATLSFLNFLSPTCASWFSDLIATNCGDKATLIAVSRKLKESDSGTIKSRS 65

Query: 372 NNE----NLNFEDYHLIDPVP-SSKASIRHKPIAHGSPLMPF-IPKPAPPT-PSP 229
           NN+     +   DY+ IDPVP SSKASI   PI HG+PL P+ IPKP+PP  P P
Sbjct: 66  NNKGDIGQVTLNDYNPIDPVPSSSKASINPGPIEHGTPLNPYIIPKPSPPNHPKP 120


>ref|XP_002320697.1| predicted protein [Populus trichocarpa] gi|222861470|gb|EEE99012.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/79 (54%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
 Frame = -1

Query: 468 DIVFPACEDSATLITHNRKLKEK-FNPSTKKRGNNENLNFEDYHLIDPVPSSKASIRHKP 292
           D+VF     S T+ T +RKLKE  ++ +   + N  N+N EDYH IDPVPSSKASI+  P
Sbjct: 17  DMVFTDSRGSMTMATTSRKLKENGYDLNDDVKTNAHNVNLEDYHPIDPVPSSKASIKPGP 76

Query: 291 IAHGSPLMPFIPKPAPPTP 235
           I HG+PL P+IPKP+PP+P
Sbjct: 77  IEHGTPLNPYIPKPSPPSP 95


>ref|NP_001237132.1| uncharacterized protein LOC100527002 precursor [Glycine max]
           gi|255631346|gb|ACU16040.1| unknown [Glycine max]
          Length = 124

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 9/115 (7%)
 Frame = -1

Query: 546 GILVLFVVVGTAFTFIAFSS--NSSFHADIVFPACEDSATLITHNRKLKEKFNPSTKKRG 373
           G  VL +VVG   +F+ F S  ++S+  D +   C+D AT I  +RKLKE  + + K   
Sbjct: 6   GFFVLLLVVGATLSFLNFLSPTSASWFPDFIATNCDDKATSIAVSRKLKENGSGTIKSSS 65

Query: 372 NNEN----LNFEDYHLIDPVP-SSKASIRHKPIAHGSPLMPF-IPKPAPPT-PSP 229
            N++    +  +DY+ IDPVP SSKASI   PI HG+PL P+ IPKP+PP  P P
Sbjct: 66  YNKDDIGQVTLDDYNPIDPVPSSSKASINPGPIEHGTPLNPYIIPKPSPPNHPKP 120


Top