BLASTX nr result

ID: Cimicifuga21_contig00029575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029575
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    70   2e-10
ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                56   3e-06
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/107 (41%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
 Frame = +3

Query: 57   RMERKCMQNWSQFPEELLGLIIQCLTSVEDCVRFGGVCKSWQSITLDKHNYTFSPKALPW 236
            ++ +  M +WS+ P++ L LI + L SVED VRFGGVCKSW SI  DK     S K+ PW
Sbjct: 913  KINQTVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKS-PW 971

Query: 237  LMF--PEDDEVKDGYFRRNYNFFTLSENKVRSLRLPMAYDCDCRGSP 371
            LM    E+ E++         F++    KV  +RLP      C GSP
Sbjct: 972  LMLAEKENSEIR--------GFYSPLSGKVYEIRLPEVVGKWCWGSP 1010


>ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|222842402|gb|EEE79949.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/98 (35%), Positives = 48/98 (48%)
 Frame = +3

Query: 75  MQNWSQFPEELLGLIIQCLTSVEDCVRFGGVCKSWQSITLDKHNYTFSPKALPWLMFPED 254
           M  WS  P ELL LI Q  T+  D +    VCKSW+S    K +       LPWL+ P  
Sbjct: 1   MSRWSDLPPELLQLITQKQTNYVDYLCVRAVCKSWRSALPKKPHDLLC--QLPWLLLPYQ 58

Query: 255 DEVKDGYFRRNYNFFTLSENKVRSLRLPMAYDCDCRGS 368
           ++  +     +  F+ L++ K   L LP AY+  C GS
Sbjct: 59  NDSPN-----HRGFYNLADGKTYRLELPEAYEKRCCGS 91


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
 Frame = +3

Query: 75  MQNWSQFPEELLGLIIQCLTSVEDCVRFGGVCKSWQSITLDKHNYTFSPKALPWLMF--P 248
           M +WS+   +LL  I +CL  +ED + FG VCKSW S+   K N+       PWLM    
Sbjct: 1   MADWSELQLDLLVSIGRCLNLIEDYLNFGRVCKSWHSVA-TKANFNNDLCRAPWLMLAEE 59

Query: 249 EDDEVKDGYFRRNYNFFTLSENKVRSLRLPMA 344
           ED+EV+         FF+L    + + R+P A
Sbjct: 60  EDNEVR--------KFFSLYNGMILNKRIPKA 83


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/88 (35%), Positives = 44/88 (50%)
 Frame = +3

Query: 81  NWSQFPEELLGLIIQCLTSVEDCVRFGGVCKSWQSITLDKHNYTFSPKALPWLMFPEDDE 260
           +W+Q P EL+ +I + +T   D + F  VC +W+S      N+   P  LPWL+ P+   
Sbjct: 4   DWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHL--PPQLPWLLLPQSQS 61

Query: 261 VKDGYFRRNYNFFTLSENKVRSLRLPMA 344
            +  Y      FF LS  K  SL LP A
Sbjct: 62  NQSSY----RAFFNLSTYKFHSLNLPEA 85


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