BLASTX nr result

ID: Cimicifuga21_contig00029572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029572
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517243.1| Mitochondrial respiratory chain complexes as...   184   8e-45
ref|XP_004148651.1| PREDICTED: ATP-dependent zinc metalloproteas...   174   7e-42
ref|XP_004163052.1| PREDICTED: ATP-dependent zinc metalloproteas...   173   1e-41
emb|CBI37548.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002274730.1| PREDICTED: ATP-dependent zinc metalloproteas...   173   1e-41

>ref|XP_002517243.1| Mitochondrial respiratory chain complexes assembly protein AFG3,
           putative [Ricinus communis] gi|223543614|gb|EEF45143.1|
           Mitochondrial respiratory chain complexes assembly
           protein AFG3, putative [Ricinus communis]
          Length = 802

 Score =  184 bits (466), Expect = 8e-45
 Identities = 90/136 (66%), Positives = 102/136 (75%)
 Frame = +1

Query: 1   VILPYYKDGKMEETGGNSKGEIVFRRHVVDRMPIDCWNDVWQKLHQQLXXXXXXXXXXXX 180
           VILPYYKDG ME   GNSK EI+FRRHVVDRMPIDCWNDVW+KLH Q+            
Sbjct: 171 VILPYYKDGNMEREKGNSKKEIIFRRHVVDRMPIDCWNDVWKKLHNQIVNIDVLNVDTVP 230

Query: 181 AEVYSTVATAVIWSMRLALSIGLYLWIDSIMRPIYAKLIPCDLGPPKKSAAEPLRRYAXX 360
           AEVYSTVATAVIWSMRLAL++GLY+WID++MRPIYAKLIPCDLG P ++  +PL+R A  
Sbjct: 231 AEVYSTVATAVIWSMRLALAVGLYVWIDNMMRPIYAKLIPCDLGKPSQTTRQPLKRRA-- 288

Query: 361 XXXXXXXXXKSRAKFI 408
                    KSRAKFI
Sbjct: 289 ----LGSLGKSRAKFI 300


>ref|XP_004148651.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis
           sativus]
          Length = 855

 Score =  174 bits (441), Expect = 7e-42
 Identities = 86/136 (63%), Positives = 101/136 (74%)
 Frame = +1

Query: 1   VILPYYKDGKMEETGGNSKGEIVFRRHVVDRMPIDCWNDVWQKLHQQLXXXXXXXXXXXX 180
           VILPYYKD    ETGG++K EI+FRRHV+DRMPIDCWNDVW+KLHQQ+            
Sbjct: 180 VILPYYKD----ETGGSAKKEIIFRRHVIDRMPIDCWNDVWKKLHQQIVNVDVINVDAVP 235

Query: 181 AEVYSTVATAVIWSMRLALSIGLYLWIDSIMRPIYAKLIPCDLGPPKKSAAEPLRRYAXX 360
           AE+YS+VATAV+WSMRLALS+ LYLWID++ RPIYAKLIPCDLG PK +   PL+R+A  
Sbjct: 236 AEIYSSVATAVVWSMRLALSVALYLWIDNLTRPIYAKLIPCDLGVPKATTNPPLKRHA-- 293

Query: 361 XXXXXXXXXKSRAKFI 408
                    KSRAKFI
Sbjct: 294 ----LGSLGKSRAKFI 305


>ref|XP_004163052.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis
           sativus]
          Length = 784

 Score =  173 bits (438), Expect = 1e-41
 Identities = 86/136 (63%), Positives = 100/136 (73%)
 Frame = +1

Query: 1   VILPYYKDGKMEETGGNSKGEIVFRRHVVDRMPIDCWNDVWQKLHQQLXXXXXXXXXXXX 180
           VILPYYKD    ETGG++K EI+FRRHV+DRMPIDCWNDVW+KLHQQ+            
Sbjct: 180 VILPYYKD----ETGGSAKKEIIFRRHVIDRMPIDCWNDVWKKLHQQIVNVDVINVDAVP 235

Query: 181 AEVYSTVATAVIWSMRLALSIGLYLWIDSIMRPIYAKLIPCDLGPPKKSAAEPLRRYAXX 360
           AE+YS+VATAV+WSMRLALS+ LYLWID++ RPIYAKLIPCDLG PK     PL+R+A  
Sbjct: 236 AEIYSSVATAVVWSMRLALSVALYLWIDNLTRPIYAKLIPCDLGVPKAITNPPLKRHA-- 293

Query: 361 XXXXXXXXXKSRAKFI 408
                    KSRAKFI
Sbjct: 294 ----LGSLGKSRAKFI 305


>emb|CBI37548.3| unnamed protein product [Vitis vinifera]
          Length = 1207

 Score =  173 bits (438), Expect = 1e-41
 Identities = 87/136 (63%), Positives = 96/136 (70%)
 Frame = +1

Query: 1   VILPYYKDGKMEETGGNSKGEIVFRRHVVDRMPIDCWNDVWQKLHQQLXXXXXXXXXXXX 180
           VILPYYKDGK E   GN   EIVFRRH VDRMPIDCWNDVW+KLH+Q+            
Sbjct: 528 VILPYYKDGKKEGGEGNLNKEIVFRRHAVDRMPIDCWNDVWRKLHEQVVNVDVLNVDAVP 587

Query: 181 AEVYSTVATAVIWSMRLALSIGLYLWIDSIMRPIYAKLIPCDLGPPKKSAAEPLRRYAXX 360
           AEVYST+ATAV+WSMRLALSI LYLWID++ RPIYAKLIPCDLG P K   +PL+R    
Sbjct: 588 AEVYSTIATAVVWSMRLALSIVLYLWIDNLTRPIYAKLIPCDLGTPSKKPRQPLKR---- 643

Query: 361 XXXXXXXXXKSRAKFI 408
                    KSRAKFI
Sbjct: 644 --RTLGSLGKSRAKFI 657


>ref|XP_002274730.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
          Length = 848

 Score =  173 bits (438), Expect = 1e-41
 Identities = 87/136 (63%), Positives = 96/136 (70%)
 Frame = +1

Query: 1   VILPYYKDGKMEETGGNSKGEIVFRRHVVDRMPIDCWNDVWQKLHQQLXXXXXXXXXXXX 180
           VILPYYKDGK E   GN   EIVFRRH VDRMPIDCWNDVW+KLH+Q+            
Sbjct: 169 VILPYYKDGKKEGGEGNLNKEIVFRRHAVDRMPIDCWNDVWRKLHEQVVNVDVLNVDAVP 228

Query: 181 AEVYSTVATAVIWSMRLALSIGLYLWIDSIMRPIYAKLIPCDLGPPKKSAAEPLRRYAXX 360
           AEVYST+ATAV+WSMRLALSI LYLWID++ RPIYAKLIPCDLG P K   +PL+R    
Sbjct: 229 AEVYSTIATAVVWSMRLALSIVLYLWIDNLTRPIYAKLIPCDLGTPSKKPRQPLKR---- 284

Query: 361 XXXXXXXXXKSRAKFI 408
                    KSRAKFI
Sbjct: 285 --RTLGSLGKSRAKFI 298


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