BLASTX nr result

ID: Cimicifuga21_contig00029566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029566
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF...    77   1e-12
emb|CBI19268.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002332472.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002301096.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002866405.1| hypothetical protein ARALYDRAFT_358300 [Arab...    64   1e-08

>ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera]
          Length = 1261

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/114 (44%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
 Frame = -1

Query: 336  LKSEMSVGVGNPTSTDDDTEKTRVLVSQGAMLLQSALASNVKKEENE-TGIRKPLSDIGN 160
            L+S ++ G+GN  S  DDT+K   L S GAMLLQSAL     +  ++    RKPLS+IG 
Sbjct: 1093 LQSAVAEGIGN-LSGSDDTQKYHDLASHGAMLLQSALVDEPAEANDDCESKRKPLSEIG- 1150

Query: 159  NSQIKSNAPRPNQRXXXXXXXXXXXXVQPP-IQSENVEAPIKLENNVVEKDVPL 1
            N   ++ AP+PN R            V PP  Q EN EAP K EN  VE D+PL
Sbjct: 1151 NKMARAKAPKPNPRKKWRKSVIQLVSVAPPSSQPENTEAPKKAENTAVEVDIPL 1204


>emb|CBI19268.3| unnamed protein product [Vitis vinifera]
          Length = 1279

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/114 (44%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
 Frame = -1

Query: 336  LKSEMSVGVGNPTSTDDDTEKTRVLVSQGAMLLQSALASNVKKEENE-TGIRKPLSDIGN 160
            L+S ++ G+GN  S  DDT+K   L S GAMLLQSAL     +  ++    RKPLS+IG 
Sbjct: 1111 LQSAVAEGIGN-LSGSDDTQKYHDLASHGAMLLQSALVDEPAEANDDCESKRKPLSEIG- 1168

Query: 159  NSQIKSNAPRPNQRXXXXXXXXXXXXVQPP-IQSENVEAPIKLENNVVEKDVPL 1
            N   ++ AP+PN R            V PP  Q EN EAP K EN  VE D+PL
Sbjct: 1169 NKMARAKAPKPNPRKKWRKSVIQLVSVAPPSSQPENTEAPKKAENTAVEVDIPL 1222


>ref|XP_002332472.1| predicted protein [Populus trichocarpa] gi|222832555|gb|EEE71032.1|
            predicted protein [Populus trichocarpa]
          Length = 1229

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
 Frame = -1

Query: 321  SVGVGNPTSTDDDTEKTRVLVSQGAMLLQSALASN-VKKEENETGIRKPLSDIGNNSQIK 145
            ++ + + T   ++TEK +VLVSQGAMLLQSAL    V+  ++    RKPLSDIG N+  K
Sbjct: 1101 AIEINDSTLGSNETEKNQVLVSQGAMLLQSALVEKPVETNDDSVVRRKPLSDIG-NTVAK 1159

Query: 144  SNAPRPNQRXXXXXXXXXXXXVQPP-IQSENVEAP-------------IKLENNVVEKDV 7
            SNAP+ NQR            V PP  +SEN EA               + +++V+E ++
Sbjct: 1160 SNAPKANQRKKWRKSVIQLVPVPPPSTKSENTEAAPQKAVGSAASNGVSEADSSVIEAEI 1219

Query: 6    PL 1
            PL
Sbjct: 1220 PL 1221


>ref|XP_002301096.1| predicted protein [Populus trichocarpa] gi|222842822|gb|EEE80369.1|
            predicted protein [Populus trichocarpa]
          Length = 1290

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
 Frame = -1

Query: 288  DDTEKTRVLVSQGAMLLQSALASNVKKEENETGI-RKPLSDIGNNSQIKSNAPRPNQRXX 112
            ++TE  +VL S GAMLL+SAL    ++  +++ + RKPLSDIG N+  KSNAP  NQR  
Sbjct: 1109 NETENNQVLASHGAMLLESALVEKPRETSDDSVVGRKPLSDIG-NTMAKSNAPNANQRKK 1167

Query: 111  XXXXXXXXXXVQPP-IQSENVE-APIKLENN-VVEKDVPL 1
                      V PP  +SEN E AP K ++N   E D+PL
Sbjct: 1168 WRKSVIQLVPVPPPTTKSENTEAAPQKADDNGASEADIPL 1207


>ref|XP_002866405.1| hypothetical protein ARALYDRAFT_358300 [Arabidopsis lyrata subsp.
            lyrata] gi|297312240|gb|EFH42664.1| hypothetical protein
            ARALYDRAFT_358300 [Arabidopsis lyrata subsp. lyrata]
          Length = 1341

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
 Frame = -1

Query: 288  DDTEKTRVLVSQGAMLLQSALASNVKKEENETG----IRKPLSDIGNNSQIKSNAPRPNQ 121
            D  ++ +VL S+GAMLLQ+ALA    +E NE G     RKPLSDIGN +  KSN PRP+Q
Sbjct: 1174 DKDQQQQVLASRGAMLLQNALADKPGEETNEDGGTRRRRKPLSDIGNTTG-KSNVPRPSQ 1232

Query: 120  RXXXXXXXXXXXXVQPPIQSENVEAPIKLEN 28
            R            V PP  S+    P+ L++
Sbjct: 1233 RKKWKKTVLQLVPVGPPASSQEEANPVTLDS 1263


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