BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029557
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...   202   3e-50
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   178   5e-43
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi...   174   9e-42

>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  202 bits (513), Expect = 3e-50
 Identities = 97/137 (70%), Positives = 115/137 (83%)
 Frame = +2

Query: 5   DQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKA 184
           DQM  + L+PDR++YTT+VDHLCKTG++ +A + F DMVE GI+PDVVSYNALINGLC+A
Sbjct: 383 DQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRA 442

Query: 185 FMVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVS 364
             V+EAMHLYEDM      PDEVT+KLIIGGLI E+KLS+ACRVWDQMME GFTLD +VS
Sbjct: 443 SRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVS 502

Query: 365 ETLINAIRSKDASLLNI 415
           ETL+NAI S DAS +NI
Sbjct: 503 ETLVNAIHSNDASCMNI 519



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/125 (30%), Positives = 64/125 (51%)
 Frame = +2

Query: 5   DQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKA 184
           + M  +  VPD   Y   ++ LC   ++D+A      MVEKG  PD+V+Y  +INGLC+A
Sbjct: 103 EDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRA 162

Query: 185 FMVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVS 364
              + A+ ++ +M      PDE   + ++ GL  + K+ +A  +    M       +S+ 
Sbjct: 163 GRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIY 222

Query: 365 ETLIN 379
            +LIN
Sbjct: 223 NSLIN 227



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/125 (27%), Positives = 56/125 (44%)
 Frame = +2

Query: 2   FDQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCK 181
           +D+M+      +   Y+  +  LCK     L      DM   G  PD+ +YN  +N LC 
Sbjct: 67  YDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCC 126

Query: 182 AFMVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSV 361
              ++ A+ + + M      PD VTY ++I GL +  +   A  +W  M+  GF+ D   
Sbjct: 127 ENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKA 186

Query: 362 SETLI 376
              L+
Sbjct: 187 CRALV 191



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/116 (32%), Positives = 60/116 (51%)
 Frame = +2

Query: 32  PDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMHL 211
           PD   Y  ++  LCK  R+D A    ++ +E     DVVSYN +I  LC A     A  L
Sbjct: 287 PDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKL 346

Query: 212 YEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLIN 379
           +E+M      PD VT+ ++I   ++E   ++A ++ DQM   G   DR +  T+++
Sbjct: 347 FEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVD 402



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/132 (29%), Positives = 64/132 (48%)
 Frame = +2

Query: 32  PDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMHL 211
           PD + Y  ++++ C    ++ A N    M   G+ PDV SYN L+ GLCKA  +++A  +
Sbjct: 252 PDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMM 311

Query: 212 YEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLINAIRS 391
             +   ++   D V+Y  II  L        A +++++M   G T D      LI A   
Sbjct: 312 MVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLR 371

Query: 392 KDASLLNIRRSL 427
           + +S  NI + L
Sbjct: 372 EGSS--NIAKKL 381



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/114 (29%), Positives = 57/114 (50%)
 Frame = +2

Query: 44  VYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMHLYEDM 223
           +Y ++++  C+ G ID A++    M   G  PD+V+YN L+N  C   ++ EA +L + M
Sbjct: 221 IYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKM 280

Query: 224 CCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLINAI 385
             S   PD  +Y  ++ GL +  +L  A  +    ME     D     T+I A+
Sbjct: 281 ERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKAL 334



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/123 (30%), Positives = 54/123 (43%)
 Frame = +2

Query: 11  MLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFM 190
           M+     PD + YT +++ LC+ GR D A   + +MV KG SPD  +  AL+ GLC    
Sbjct: 140 MVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGK 199

Query: 191 VNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSET 370
           V+ A  L       R    +  Y  +I G  Q   +  A  +   M  NG   D      
Sbjct: 200 VDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNV 259

Query: 371 LIN 379
           L+N
Sbjct: 260 LLN 262


>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/129 (66%), Positives = 102/129 (79%)
 Frame = +2

Query: 5   DQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKA 184
           D M  M L+PDRI YTT++DH CK+G++++A + F DMVEKGI+PDVVSYNALING CK+
Sbjct: 384 DLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKS 443

Query: 185 FMVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVS 364
             V E MHLYE M    + PDEVTYKLIIG L++E KLS ACRVWDQMME G TLDR +S
Sbjct: 444 LRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGIS 503

Query: 365 ETLINAIRS 391
           E LINAI+S
Sbjct: 504 EMLINAIQS 512



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = +2

Query: 41  IVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMHLYED 220
           +VY  ++   C+ GRID A      M   G  PD+V+YN L+N  C  FM  EA+ L + 
Sbjct: 221 LVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKK 280

Query: 221 MCCSRTHPDEVTYKLII 271
           M CS   PD  +Y  ++
Sbjct: 281 MECSAIEPDVYSYNQLL 297



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 36/145 (24%)
 Frame = +2

Query: 2   FDQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPD------------- 142
           F +M+     PD + +T ++D LCK  + D A  F+L+M++KGI PD             
Sbjct: 137 FGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCD 196

Query: 143 -------------VVS----------YNALINGLCKAFMVNEAMHLYEDMCCSRTHPDEV 253
                        V+S          YNALI+G C+A  +++A+ +   M  +   PD V
Sbjct: 197 GGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLV 256

Query: 254 TYKLIIGGLIQEEKLSMACRVWDQM 328
           TY +++     E     A ++  +M
Sbjct: 257 TYNVLLNYCCNEFMFEEAVKLLKKM 281



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
 Frame = +2

Query: 32  PDRIVYTTMVDHLCKTGRIDLARNFFLD-MVEKGISPDVVSYNALINGLCKAFMVNEAMH 208
           PD   Y  ++   CK    D A  F +  MV KG   DVVSYN +I   C       A  
Sbjct: 288 PDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFC-DVVSYNTIIKAFCSISNNRRAYK 346

Query: 209 LYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLIN 379
           L+E+M      PD VT+ ++I   ++E    MA ++ D M   G   DR    T+I+
Sbjct: 347 LFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIID 403


>ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  179 bits (455), Expect = 2e-43
 Identities = 80/133 (60%), Positives = 107/133 (80%)
 Frame = +2

Query: 5   DQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKA 184
           D+M  M ++PD I YT +VDHLCK G++D+A + F DMVE G++PDV+SYNAL+NG CK 
Sbjct: 388 DEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKT 447

Query: 185 FMVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVS 364
             V +AMHL+++M     +PDEVTYKLI+GGLI+ +K+S+ACRVWDQMME GFTL+R +S
Sbjct: 448 SRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLS 507

Query: 365 ETLINAIRSKDAS 403
           ETL+NAI+S D +
Sbjct: 508 ETLVNAIQSSDGT 520



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/118 (27%), Positives = 57/118 (48%)
 Frame = +2

Query: 29  VPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMH 208
           VPD + Y  ++++ C+ G +D A      M   G+ PD+ SYN L+ G CKA MV+ A  
Sbjct: 256 VPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHL 315

Query: 209 LYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLINA 382
           +  +   ++   D V+Y  +I    +  +      ++++M   G   D      LI+A
Sbjct: 316 MMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDA 373



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/114 (31%), Positives = 56/114 (49%)
 Frame = +2

Query: 41  IVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMHLYED 220
           +VY  ++D  C+ GR+D A      M   G  PD+V+YN L+N  C+  MV+EA+ L E 
Sbjct: 225 LVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVET 284

Query: 221 MCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLINA 382
           M  S   PD  +Y  ++ G  +   +  A  +  + M+     D     T+I A
Sbjct: 285 MERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITA 338



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/115 (29%), Positives = 60/115 (52%)
 Frame = +2

Query: 8   QMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAF 187
           +++   L PD      +V  LC  GR+DLA    + +++ G+  + + YNALI+G C+  
Sbjct: 179 RLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMG 238

Query: 188 MVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLD 352
            V++AM +   M  +   PD VTY +++    +E  +  A R+ + M  +G   D
Sbjct: 239 RVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPD 293



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/99 (29%), Positives = 49/99 (49%)
 Frame = +2

Query: 32  PDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMHL 211
           PD   Y  ++   CK   +D A    ++ ++     DVVSYN +I   CKA    +   L
Sbjct: 292 PDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYEL 351

Query: 212 YEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQM 328
           +E+MC     PD VT+ ++I   ++E    +  ++ D+M
Sbjct: 352 FEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEM 390



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/123 (28%), Positives = 60/123 (48%)
 Frame = +2

Query: 11  MLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFM 190
           M S+  VPD   + T ++ LC+  R++ A   F  M  KG  PDVVSY  +I+ LC A  
Sbjct: 110 MDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKR 169

Query: 191 VNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSET 370
            +EA  ++  +      PD      ++ GL    ++ +A  +   +++ G  ++  V   
Sbjct: 170 FDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229

Query: 371 LIN 379
           LI+
Sbjct: 230 LID 232



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
 Frame = +2

Query: 47  YTTMVDHLCKTGR---IDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMHLYE 217
           Y+  +  LC       + L  +  LDM   G  PD+ ++N  +N LC+   +  A+ L+ 
Sbjct: 84  YSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFH 143

Query: 218 DMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLI 376
            M      PD V+Y +II  L   ++   A +VW ++++ G + D      L+
Sbjct: 144 SMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALV 196



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/126 (27%), Positives = 56/126 (44%)
 Frame = +2

Query: 2   FDQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCK 181
           F  M S    PD + YT ++D LC   R D A   +  +++KG+SPD  +  AL+ GLC 
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201

Query: 182 AFMVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSV 361
              V+ A  L   +       + + Y  +I G  +  ++  A ++   M   G   D   
Sbjct: 202 GGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVT 261

Query: 362 SETLIN 379
              L+N
Sbjct: 262 YNILLN 267


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/133 (61%), Positives = 108/133 (81%)
 Frame = +2

Query: 5   DQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKA 184
           DQM  M L PD I YTT++DHLCK+G++++A + F DMVE+GISPDV+S+NALING CK 
Sbjct: 384 DQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKC 443

Query: 185 FMVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVS 364
             V+EAMHLYE+M    ++PDEVTYKLIIGGLI+E+K+S+AC VW QMM+ GFTLDR+++
Sbjct: 444 SRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIA 503

Query: 365 ETLINAIRSKDAS 403
           +TLI     ++AS
Sbjct: 504 QTLIRGNSIENAS 516



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/110 (31%), Positives = 56/110 (50%)
 Frame = +2

Query: 11  MLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFM 190
           M ++N +PD   +   +  L   GRIDLA   F  +V+ G  PDVV+Y  +I+G+CK   
Sbjct: 105 METLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKK 164

Query: 191 VNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENG 340
            + A+  + DM      PD      I+ GL    K+ +A  +   +M++G
Sbjct: 165 FDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSG 214



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   FDQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCK 181
           F++++     PD + YT ++  +CK  + D A  F+ DM+ KG SPD  +  A++ GLC 
Sbjct: 137 FEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCD 196

Query: 182 AFMVNEAMHLYED-MCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRS 358
              V+ A  L  D M   R     + Y  +I G  +  ++  A  +   M  NG   D  
Sbjct: 197 GRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLV 256

Query: 359 VSETLIN 379
                +N
Sbjct: 257 TYNVFLN 263



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/132 (27%), Positives = 59/132 (44%)
 Frame = +2

Query: 32  PDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMHL 211
           PD + Y   +++ C    +D A+     M   GI PDV SYN L+ G+CK    ++A  L
Sbjct: 253 PDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLL 312

Query: 212 YEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLINAIRS 391
             +    +   D V+Y  II    +    + A +++++M + G   D       I A   
Sbjct: 313 MTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLG 372

Query: 392 KDASLLNIRRSL 427
           K +   NI + L
Sbjct: 373 KGS--FNIAKKL 382



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/92 (31%), Positives = 46/92 (50%)
 Frame = +2

Query: 5   DQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKA 184
           D M S  +    +VY  ++   C+ GRID A+     M   G  PD+V+YN  +N  C  
Sbjct: 209 DVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDE 268

Query: 185 FMVNEAMHLYEDMCCSRTHPDEVTYKLIIGGL 280
            M+++A  L + M  S   PD  +Y  ++ G+
Sbjct: 269 LMLDDAKKLLKLMERSGIEPDVYSYNQLLKGI 300


>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
           gi|449494962|ref|XP_004159696.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/125 (66%), Positives = 106/125 (84%)
 Frame = +2

Query: 26  LVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAM 205
           L+PD I YTT+VD+ CKT +I++A+  F DM+E GISPDVVSYNALINGLCKA  V+EAM
Sbjct: 389 LIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAM 448

Query: 206 HLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLINAI 385
            LYE+M     +PDEVT+KLIIGGL+++++LS+AC+VWDQMME G+TLD+ +SETLI AI
Sbjct: 449 LLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAI 508

Query: 386 RSKDA 400
           RS+DA
Sbjct: 509 RSRDA 513



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/126 (30%), Positives = 62/126 (49%)
 Frame = +2

Query: 2   FDQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCK 181
           FD+M++    PD + YT +VD LCK  + D A  F+  MV KG+SPD+ +  AL+ GLC 
Sbjct: 137 FDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCD 196

Query: 182 AFMVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSV 361
              V+ A  L           + + +  ++ G  +  ++S A  +   M ++G   D   
Sbjct: 197 GGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLIT 256

Query: 362 SETLIN 379
              L+N
Sbjct: 257 YNILLN 262



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/117 (32%), Positives = 57/117 (48%)
 Frame = +2

Query: 32  PDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMHL 211
           PD I Y  +++  C    ++LA      M   G+ PDV SYN L+ GLCKA  +++A  L
Sbjct: 252 PDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKL 311

Query: 212 YEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLINA 382
              M   +   D V+Y  +IG L +      A R++++M +     D     TLI A
Sbjct: 312 MNTM-WEKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKA 367



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/94 (35%), Positives = 48/94 (51%)
 Frame = +2

Query: 8   QMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAF 187
           +M  + + PD   Y  ++  LCK  R+D A      M EKG+  D VSYN +I  LCK+F
Sbjct: 279 KMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLC-DTVSYNTVIGALCKSF 337

Query: 188 MVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQE 289
              +A  L+E+M      PD  T+  +I   + E
Sbjct: 338 ATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIE 371



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/117 (27%), Positives = 57/117 (48%)
 Frame = +2

Query: 35  DRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCKAFMVNEAMHLY 214
           + +++ +++   CK+GRI  A      M + G  PD+++YN L+N  C   M+  A    
Sbjct: 218 NNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSM 277

Query: 215 EDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSVSETLINAI 385
           + M      PD  +Y  ++ GL +  +L  A ++ + M E G   D     T+I A+
Sbjct: 278 KKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGL-CDTVSYNTVIGAL 333



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/125 (22%), Positives = 54/125 (43%)
 Frame = +2

Query: 2   FDQMLSMNLVPDRIVYTTMVDHLCKTGRIDLARNFFLDMVEKGISPDVVSYNALINGLCK 181
           + +M+          Y+  +  LC+     L      DM + G  PD+ ++N  +N L +
Sbjct: 67  YSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFR 126

Query: 182 AFMVNEAMHLYEDMCCSRTHPDEVTYKLIIGGLIQEEKLSMACRVWDQMMENGFTLDRSV 361
             ++  A+  +++M      PD VTY +I+  L + ++   A   W  M+  G + D   
Sbjct: 127 ENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKA 186

Query: 362 SETLI 376
              L+
Sbjct: 187 CTALV 191