BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029556
         (1422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase...   803   0.0  
ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase...   785   0.0  
ref|XP_002329850.1| predicted protein [Populus trichocarpa] gi|2...   781   0.0  
emb|CAN79335.1| hypothetical protein VITISV_026088 [Vitis vinifera]   771   0.0  
ref|XP_002509621.1| DNA photolyase, putative [Ricinus communis] ...   764   0.0  

>ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Vitis vinifera]
          Length = 485

 Score =  803 bits (2075), Expect = 0.0
 Identities = 376/463 (81%), Positives = 415/463 (89%)
 Frame = +3

Query: 33   LVQSGRIRILKEGSKPSVQECGPVVYWMFRDQRLKDNWALIHAVDQATKSNVPVVVGFNL 212
            +VQ GRIR+LKEGS PS ++ GPVVYWMFRDQRL+DNWALIHAVDQA K+NVPV + FNL
Sbjct: 1    MVQQGRIRVLKEGSTPSGRDAGPVVYWMFRDQRLRDNWALIHAVDQANKANVPVAIAFNL 60

Query: 213  FDQFLGAKARQLGFMLRGLRQLQRSLADTLDIPFFLFQGEAVETIPNFLKECGASLLVTD 392
            FDQFLGAKARQLGFMLRGLR L R L  TL IPFFLFQGEA+ETIPNFL+E GASLLVTD
Sbjct: 61   FDQFLGAKARQLGFMLRGLRLLHRDLEQTLQIPFFLFQGEAIETIPNFLREYGASLLVTD 120

Query: 393  FSPLREVRKWKEEICNRVGDSVAVHEVDAHNVVPLWTASSKLEYSARTLRGKINKLLPTY 572
            FSPLREV+KWKEEIC RVG  V++HEVDAHN+VP W AS KLEYSART+RGKINKLLP Y
Sbjct: 121  FSPLREVQKWKEEICKRVGKKVSIHEVDAHNIVPTWVASEKLEYSARTIRGKINKLLPEY 180

Query: 573  LIDYPNLHAPNKKWVGGYRPIDWDNIIADVLRKGAEVPELEWCEPGEVAAMEVLMGSKDG 752
            LID+P L  P+ KW G  + IDWD++I +VLR+GAEVPE++WCE GE AA+E+LMGSK+G
Sbjct: 181  LIDFPTLQPPSIKWAGTNQSIDWDDLITEVLREGAEVPEIKWCESGENAAVEILMGSKNG 240

Query: 753  FLTKRLKSYSTDRNNPLKPKALSGLSPYLHFGQISAQRCALEVRKVRNLHPQSADAFLEE 932
            FLTKRLK+YSTDRNNPLKP ALSGLSPYLHFGQISAQRCALE +K R   PQ+ D FLEE
Sbjct: 241  FLTKRLKNYSTDRNNPLKPGALSGLSPYLHFGQISAQRCALEAKKNRKNCPQAVDVFLEE 300

Query: 933  LIVRRELADNFCYYQPHYDSLLGAWEWARKTLMDHAVDKREHIYTKEQLEKANTADPLWN 1112
            LIVRRELADNFC+YQP Y+SL GAWEWARKTLMDHA DKREHIYTKEQLE A TADPLWN
Sbjct: 301  LIVRRELADNFCFYQPRYNSLQGAWEWARKTLMDHASDKREHIYTKEQLENAQTADPLWN 360

Query: 1113 ASQLEMIHYGKLHGFMRMYWAKKILEWTSGPDEALAIAIYLNDKYHIDGRDPSGYVGCMW 1292
            ASQLEM+HYGK+HGFMRMYWAKKILEWT GP+EALAI+IYLNDKY IDGRDP+GYVGCMW
Sbjct: 361  ASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALAISIYLNDKYEIDGRDPNGYVGCMW 420

Query: 1293 SICGVHDQGWQERPVFGKIRYMNYAGCKRKFDVEGYIAYVKRL 1421
            SICGVHDQGWQER +FGKIRYMNYAGCKRKFDV+GYIA+VKRL
Sbjct: 421  SICGVHDQGWQERQIFGKIRYMNYAGCKRKFDVDGYIAHVKRL 463


>ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Cucumis sativus]
            gi|449517475|ref|XP_004165771.1| PREDICTED:
            deoxyribodipyrimidine photo-lyase-like [Cucumis sativus]
            gi|13383259|dbj|BAB39480.1| CPD photolyase [Cucumis
            sativus] gi|20387244|dbj|BAB91322.1| CPD photolyase
            [Cucumis sativus]
          Length = 489

 Score =  785 bits (2027), Expect = 0.0
 Identities = 370/462 (80%), Positives = 408/462 (88%)
 Frame = +3

Query: 36   VQSGRIRILKEGSKPSVQECGPVVYWMFRDQRLKDNWALIHAVDQATKSNVPVVVGFNLF 215
            VQ  R R+LK+G+       GPVVYWMFRDQR+KDNWALIHAVD+A ++NVPV V FNLF
Sbjct: 9    VQPCRFRVLKDGTG----SLGPVVYWMFRDQRVKDNWALIHAVDEANRANVPVAVAFNLF 64

Query: 216  DQFLGAKARQLGFMLRGLRQLQRSLADTLDIPFFLFQGEAVETIPNFLKECGASLLVTDF 395
            D+FLGAK+RQLGFMLRGL+QLQ  + +TL IPFFLFQGEA +TIPNF++ECGASLLVTDF
Sbjct: 65   DRFLGAKSRQLGFMLRGLQQLQHDIQETLQIPFFLFQGEAEQTIPNFIRECGASLLVTDF 124

Query: 396  SPLREVRKWKEEICNRVGDSVAVHEVDAHNVVPLWTASSKLEYSARTLRGKINKLLPTYL 575
            SPLREVRK KEEIC RV +SV VHEVDAHNVVP W AS KLEYSA+TLRGKINK LP YL
Sbjct: 125  SPLREVRKCKEEICKRVEESVKVHEVDAHNVVPTWVASEKLEYSAKTLRGKINKKLPDYL 184

Query: 576  IDYPNLHAPNKKWVGGYRPIDWDNIIADVLRKGAEVPELEWCEPGEVAAMEVLMGSKDGF 755
            IDYP++  P +KW    + IDWD +I D LRKGA+VPELEWC+PGE AAMEVLMGSKDGF
Sbjct: 185  IDYPSMVIPTRKWPSADKFIDWDRLIDDNLRKGADVPELEWCKPGEKAAMEVLMGSKDGF 244

Query: 756  LTKRLKSYSTDRNNPLKPKALSGLSPYLHFGQISAQRCALEVRKVRNLHPQSADAFLEEL 935
            LTKRLK Y+ DRNNPLKPK LSGLSPYLHFGQISAQRCALE R +R L+PQ+ D FLEEL
Sbjct: 245  LTKRLKGYAIDRNNPLKPKGLSGLSPYLHFGQISAQRCALEARSIRKLNPQAVDVFLEEL 304

Query: 936  IVRRELADNFCYYQPHYDSLLGAWEWARKTLMDHAVDKREHIYTKEQLEKANTADPLWNA 1115
            IVRRELADN+CYYQPHYDSLLGAWEWARKTLMDHA DKRE+IYT+EQLEKA TADPLWNA
Sbjct: 305  IVRRELADNYCYYQPHYDSLLGAWEWARKTLMDHASDKREYIYTREQLEKAQTADPLWNA 364

Query: 1116 SQLEMIHYGKLHGFMRMYWAKKILEWTSGPDEALAIAIYLNDKYHIDGRDPSGYVGCMWS 1295
            +QLEM H+GK+HGFMRMYWAKKILEWT GP+EAL I IYLNDKY IDGRDP+GYVGCMWS
Sbjct: 365  AQLEMAHHGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEIDGRDPNGYVGCMWS 424

Query: 1296 ICGVHDQGWQERPVFGKIRYMNYAGCKRKFDVEGYIAYVKRL 1421
            ICGVHDQGW+ERPVFGKIRYMNYAGCKRKFDV+GYIAYVKRL
Sbjct: 425  ICGVHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYIAYVKRL 466


>ref|XP_002329850.1| predicted protein [Populus trichocarpa] gi|222871087|gb|EEF08218.1|
            predicted protein [Populus trichocarpa]
          Length = 503

 Score =  781 bits (2017), Expect = 0.0
 Identities = 375/470 (79%), Positives = 414/470 (88%), Gaps = 7/470 (1%)
 Frame = +3

Query: 33   LVQSGRIRILKEGSKPSVQECGPVVYWMFRDQRLKDNWALIHAVDQATKSNVPVVVGFNL 212
            +VQ GRIR++KEGS+  V   GPVVYWMFRDQRL+DNWALIHAVDQA +SNVPV V FNL
Sbjct: 13   IVQPGRIRVIKEGSRGQVGG-GPVVYWMFRDQRLQDNWALIHAVDQANRSNVPVAVAFNL 71

Query: 213  FDQFLGAKARQLGFMLRGLRQLQRSLADTLDIPFFLFQGEAVETIPNFLKECGASLLVTD 392
            FDQFLGAKARQLGFMLRGL QLQ  + +TL IPFFLF GEA ETIP FLK+CGASLLVTD
Sbjct: 72   FDQFLGAKARQLGFMLRGLCQLQSHIEETLQIPFFLFLGEAEETIPAFLKDCGASLLVTD 131

Query: 393  FSPLREVRKWKEEICNRVGDSVAVHEVDAHNVVPLWTASSKLEYSARTLRGKINKLLPTY 572
            FSPLR+ R  ++EIC RV DSV +HEVDAHNVVP+W AS KLEYSARTLRGKINKLLP Y
Sbjct: 132  FSPLRQFRTCQDEICKRVSDSVTIHEVDAHNVVPIWVASEKLEYSARTLRGKINKLLPEY 191

Query: 573  LIDYPNLHAPNKKWVGGYRP-IDWDNIIADVLRKGAEVPELEWCEPGEVAAMEVLMGSKD 749
            LID+P L  P  KWV   +  IDW+++I +VLRKGAEVPE++WCEPGE AAMEVLMGSKD
Sbjct: 192  LIDFPMLQLPKNKWVAATKQSIDWNDLIDNVLRKGAEVPEIKWCEPGEDAAMEVLMGSKD 251

Query: 750  GFLTKRLKSYSTDRNNPLKPKALSGLSPYLHFGQISAQRCALEVRKVRNLHPQSADAFLE 929
            GFLT+RLK+YSTDRNNPLKPK LSGLSPYLHFGQISAQRCALE RKVRNL PQSADAFLE
Sbjct: 252  GFLTQRLKNYSTDRNNPLKPKGLSGLSPYLHFGQISAQRCALEARKVRNLSPQSADAFLE 311

Query: 930  ELIVRRELADNFCYYQPHYDSLLGAWEWARKTLMDHAVDKREHIYTKEQLEKANTADPLW 1109
            ELIVRRELADNFC+YQP+YDS+ GAWEWARKTL DHA DKREHIY+KEQLEKA TADPLW
Sbjct: 312  ELIVRRELADNFCFYQPNYDSIHGAWEWARKTLADHASDKREHIYSKEQLEKAQTADPLW 371

Query: 1110 NASQLEMIHYGKLHGFMR------MYWAKKILEWTSGPDEALAIAIYLNDKYHIDGRDPS 1271
            NASQLEM+ +GK+HGFMR      MYWAKKILEWT GP+EALAI+IYLNDKY IDGRDP 
Sbjct: 372  NASQLEMVCHGKMHGFMRQKTLCSMYWAKKILEWTRGPEEALAISIYLNDKYEIDGRDPG 431

Query: 1272 GYVGCMWSICGVHDQGWQERPVFGKIRYMNYAGCKRKFDVEGYIAYVKRL 1421
            GYVGCMWSICG+HDQGW+ERP+FGKIRYMNYAGCKRKF+V+GYI YVKR+
Sbjct: 432  GYVGCMWSICGIHDQGWKERPIFGKIRYMNYAGCKRKFNVDGYITYVKRI 481


>emb|CAN79335.1| hypothetical protein VITISV_026088 [Vitis vinifera]
          Length = 514

 Score =  771 bits (1990), Expect = 0.0
 Identities = 368/482 (76%), Positives = 409/482 (84%), Gaps = 17/482 (3%)
 Frame = +3

Query: 27   TALVQSGRIRILKEGSKPSVQECGPVVYWMFRDQRLKDNWALIHAVDQATKSNVPVVVGF 206
            +++VQ GRIR+LKEGS PS ++ GPVVYWMFRDQRL+DNWALIHAVDQA K+NVPV + F
Sbjct: 11   SSMVQQGRIRVLKEGSTPSGRDAGPVVYWMFRDQRLRDNWALIHAVDQANKANVPVAIAF 70

Query: 207  NLFDQFLGAKARQLGFMLRGLRQLQRSLADTLDIPFFLFQGEAVETIPNFLK-----ECG 371
            NLFDQFLGAKARQLGFMLRGLR L R L  TL IPFFLFQ    E   + L      E G
Sbjct: 71   NLFDQFLGAKARQLGFMLRGLRLLHRDLEQTLQIPFFLFQAYTFEISASLLDSHSVWEYG 130

Query: 372  ASLLVTDFSPLREVRKWKEEICNRVGDSVAVHEVDAHNVVPLWTASSKLEYSARTLRGKI 551
            ASLLVTDFSPLREV+KWKEEIC RVG  V++HEVDAHN+VP W AS KLEYSART+RGKI
Sbjct: 131  ASLLVTDFSPLREVQKWKEEICKRVGKKVSIHEVDAHNIVPTWVASEKLEYSARTIRGKI 190

Query: 552  NKLLPTYLIDYPNLHAPNKKWVGGYRPIDWDNIIADVLRKGAEVPELEWCEPGEVAAMEV 731
            NKLLP YLID+P L  P+ KW G  + IDWD++I +VLR+GAEVPE++WCE GE AA+E+
Sbjct: 191  NKLLPEYLIDFPTLQPPSIKWAGTNQSIDWDDLITEVLREGAEVPEIKWCESGENAAVEI 250

Query: 732  LMGSKDGFLTKRLKSYSTDRNNPLKPKALSGLSPYLHFGQISAQRCALEVRKVRNLHPQS 911
            LMGSK+GFLTKRLK+YSTDRNNPLKP ALSGLSPYLHFGQISAQRCALE +K++   PQ+
Sbjct: 251  LMGSKNGFLTKRLKNYSTDRNNPLKPGALSGLSPYLHFGQISAQRCALEAKKIQKNCPQA 310

Query: 912  ADAFLEELIVRRELADNFCYYQPHYDSLLGAWEWARKTLMDHAVDKREHIYTKEQLEKAN 1091
             D FLEELIVRRELADNFC+YQP Y+SL GAWEWARKTLMDHA DKREHIYTKEQLE A 
Sbjct: 311  VDVFLEELIVRRELADNFCFYQPRYNSLQGAWEWARKTLMDHASDKREHIYTKEQLENAQ 370

Query: 1092 TADPLWNASQLEMIHYGKLHGFMR------------MYWAKKILEWTSGPDEALAIAIYL 1235
            TADPLWNASQLEM+HYGK+HGFMR            MYWAKKILEWT GP+EALAI+IYL
Sbjct: 371  TADPLWNASQLEMVHYGKMHGFMRQEMQDITILEIQMYWAKKILEWTRGPEEALAISIYL 430

Query: 1236 NDKYHIDGRDPSGYVGCMWSICGVHDQGWQERPVFGKIRYMNYAGCKRKFDVEGYIAYVK 1415
            NDKY IDGRDP+GYVGCMWSICGVHDQGWQER +FGKIRYMNYAGCKRKFDV+GYIAYVK
Sbjct: 431  NDKYEIDGRDPNGYVGCMWSICGVHDQGWQERQIFGKIRYMNYAGCKRKFDVDGYIAYVK 490

Query: 1416 RL 1421
            RL
Sbjct: 491  RL 492


>ref|XP_002509621.1| DNA photolyase, putative [Ricinus communis]
            gi|223549520|gb|EEF51008.1| DNA photolyase, putative
            [Ricinus communis]
          Length = 489

 Score =  764 bits (1973), Expect = 0.0
 Identities = 358/462 (77%), Positives = 403/462 (87%), Gaps = 1/462 (0%)
 Frame = +3

Query: 36   VQSGRIRILKEGSKPSVQECGPVVYWMFRDQRLKDNWALIHAVDQATKSNVPVVVGFNLF 215
            +Q GR+R+LKEG +   ++ GPV+YWMFRDQRL+DNWALIHAVDQA K+NVPV V FNLF
Sbjct: 8    IQPGRVRVLKEGLE---KQTGPVIYWMFRDQRLRDNWALIHAVDQANKANVPVAVAFNLF 64

Query: 216  DQFLGAKARQLGFMLRGLRQLQRSLADTLDIPFFLFQGEAVETIPNFLKECGASLLVTDF 395
            DQFLGAKARQLGFML+GLR LQ  + + L IPFFLFQG A +TIP FL ECGASLLVTDF
Sbjct: 65   DQFLGAKARQLGFMLKGLRLLQGKIEERLQIPFFLFQGAAEDTIPQFLGECGASLLVTDF 124

Query: 396  SPLREVRKWKEEICNRVGDSVAVHEVDAHNVVPLWTASSKLEYSARTLRGKINKLLPTYL 575
            SPLRE+RK K+EIC R+ D+V +HEVDAHN+VP+W AS KLEYSART+R KINK LP YL
Sbjct: 125  SPLREIRKSKDEICMRISDTVTIHEVDAHNIVPIWVASEKLEYSARTIRSKINKRLPDYL 184

Query: 576  IDYPNLHAPNKKW-VGGYRPIDWDNIIADVLRKGAEVPELEWCEPGEVAAMEVLMGSKDG 752
            ID+P L  PN  W     + IDWD +I +VLRKGAEVPE+EWC PGE AAMEVLMG+K+G
Sbjct: 185  IDFPALRPPNTMWSAAANKSIDWDTLIDEVLRKGAEVPEIEWCMPGEDAAMEVLMGTKNG 244

Query: 753  FLTKRLKSYSTDRNNPLKPKALSGLSPYLHFGQISAQRCALEVRKVRNLHPQSADAFLEE 932
            FLTKRLK+YSTDRNNPLKP+ LSGLSPYLHFGQISAQRCALE RK + L PQS D+FLEE
Sbjct: 245  FLTKRLKNYSTDRNNPLKPQGLSGLSPYLHFGQISAQRCALEARKAQKLCPQSVDSFLEE 304

Query: 933  LIVRRELADNFCYYQPHYDSLLGAWEWARKTLMDHAVDKREHIYTKEQLEKANTADPLWN 1112
            LIVRRELADNFC+YQPHYDSL GAWEWAR TL+DHA DKREHIY+KEQLE+A TAD LWN
Sbjct: 305  LIVRRELADNFCFYQPHYDSLQGAWEWARNTLLDHASDKREHIYSKEQLERAQTADLLWN 364

Query: 1113 ASQLEMIHYGKLHGFMRMYWAKKILEWTSGPDEALAIAIYLNDKYHIDGRDPSGYVGCMW 1292
            ASQLEM++YGK+HGFMRMYWAKKILEWT GP+EALAI+ YLNDKY IDGRDPSGYVGCMW
Sbjct: 365  ASQLEMVYYGKMHGFMRMYWAKKILEWTRGPEEALAISTYLNDKYEIDGRDPSGYVGCMW 424

Query: 1293 SICGVHDQGWQERPVFGKIRYMNYAGCKRKFDVEGYIAYVKR 1418
            SICGVHDQGW+ERP+FGKIRYMNYAGCKRKF+V+ YI YVKR
Sbjct: 425  SICGVHDQGWKERPIFGKIRYMNYAGCKRKFNVDSYITYVKR 466