BLASTX nr result
ID: Cimicifuga21_contig00029550
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00029550
(849 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002301895.1| predicted protein [Populus trichocarpa] gi|2... 328 9e-88
ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putativ... 325 1e-86
ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 312 5e-83
ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 312 5e-83
ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 312 5e-83
>ref|XP_002301895.1| predicted protein [Populus trichocarpa] gi|222843621|gb|EEE81168.1|
predicted protein [Populus trichocarpa]
Length = 1112
Score = 328 bits (841), Expect = 9e-88
Identities = 178/297 (59%), Positives = 210/297 (70%), Gaps = 15/297 (5%)
Frame = -3
Query: 847 KLDEEMDKRRKRVQEWQEMKRKKEESEKGMVGE-TKYDEPISGKDWNFXXXXXXXXXXXX 671
KLDEEM+KRR+RVQEWQE++RKKEE+E+ GE +EP +GK W
Sbjct: 240 KLDEEMEKRRRRVQEWQELRRKKEETEREKHGEEADVNEPKTGKTWTLEGESDDEEAPPT 299
Query: 670 GVANSN-----------EEVDPLDAFMNSVVLPEVQKLNNQ---ESSTIDKMLEPEKDPK 533
G + ++ EE+DPLDAFMNS+VLPEV+KLN+ ++ +K KD K
Sbjct: 300 GKSETDMDLEENAKPDEEEIDPLDAFMNSMVLPEVEKLNSTLVTHTADDNKTDLKNKDKK 359
Query: 532 EGLVNGNQPKKGRKKSLGRIIPGEDSDSDYYGXXXXXXXXXXXXXXEAFIKRVKKTKVEK 353
E +NG Q KKG KSLGRI+PGEDSDSDY G + F+KRVKKTK EK
Sbjct: 360 EERINGEQRKKGSHKSLGRIVPGEDSDSDY-GDLENGEDPLEEEDDDEFMKRVKKTKAEK 418
Query: 352 LALVDHSMIQYPPFRKNLYTEVKEISRMTSEEVATYRKQLELKIYGKDVPKPIKTWIQTG 173
L++VDHS I Y PFRKN Y EVKEISRMT EEV RK+LELK++GKDVPKPIKTW QTG
Sbjct: 419 LSIVDHSKIDYNPFRKNFYIEVKEISRMTPEEVVACRKELELKLHGKDVPKPIKTWHQTG 478
Query: 172 STSKVLDIIKRLGYEKPMPVQAQALPIIMSGRDCIGVANTGSGKTLAFVLPMLRHIK 2
TSK+L+ IK+L YEKPM +QAQALPIIMSGRDCIG+A TGSGKTLAFVLPMLRHIK
Sbjct: 479 LTSKILETIKKLNYEKPMTIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIK 535
>ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 1173
Score = 325 bits (832), Expect = 1e-86
Identities = 182/322 (56%), Positives = 210/322 (65%), Gaps = 40/322 (12%)
Frame = -3
Query: 847 KLDEEMDKRRKRVQEWQEMKRKKEESEKGMVGE-TKYDEPISGKDWNFXXXXXXXXXXXX 671
+LDEEM+KRR+RVQEWQE++RKKEESE+ GE + DEP +GK W
Sbjct: 270 RLDEEMEKRRRRVQEWQELRRKKEESEREKHGEASNADEPQTGKTWTLEGESDDEEAPLA 329
Query: 670 GVANSN--------------------------------------EEVDPLDAFMNSVVLP 605
G + +N EE+DPLDAFMNS+VLP
Sbjct: 330 GKSETNMDLDENAKPDEEIGDAMVVDSYNGTATSENGDNDVIEDEEIDPLDAFMNSMVLP 389
Query: 604 EVQKLNNQE-SSTIDKMLEPEKDPKEGLVNGNQPKKGRKKSLGRIIPGEDSDSDYYGXXX 428
EV+KLNN + T+D+ K KE G + KKG KSLGRIIPGEDSDSDY G
Sbjct: 390 EVEKLNNAVITETVDENKVELKKKKEEGNEGEKLKKGSNKSLGRIIPGEDSDSDY-GDLE 448
Query: 427 XXXXXXXXXXXEAFIKRVKKTKVEKLALVDHSMIQYPPFRKNLYTEVKEISRMTSEEVAT 248
+ F+KRVKKTK EKL++VDHS I Y PFRKN Y EVKEISRM EEVA
Sbjct: 449 NDEGPLDDEDDDEFMKRVKKTKAEKLSVVDHSKIDYKPFRKNFYIEVKEISRMAPEEVAA 508
Query: 247 YRKQLELKIYGKDVPKPIKTWIQTGSTSKVLDIIKRLGYEKPMPVQAQALPIIMSGRDCI 68
YRKQLELKI+GKDVPKP+KTW QTG SK+L+ IK+L YEKPMP+QAQALPIIMSGRDCI
Sbjct: 509 YRKQLELKIHGKDVPKPVKTWHQTGLASKILETIKKLNYEKPMPIQAQALPIIMSGRDCI 568
Query: 67 GVANTGSGKTLAFVLPMLRHIK 2
G+A TGSGKTLAFVLPMLRHIK
Sbjct: 569 GIAKTGSGKTLAFVLPMLRHIK 590
>ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
42-like [Cucumis sativus]
Length = 1098
Score = 312 bits (800), Expect = 5e-83
Identities = 174/325 (53%), Positives = 205/325 (63%), Gaps = 43/325 (13%)
Frame = -3
Query: 847 KLDEEMDKRRKRVQEWQEMKRKKEESEKGMVGETKYDEPISGKDWNFXXXXXXXXXXXXG 668
+LDEEM+KRR+RVQEWQ+ +R KEE++ GE DEP SGK W
Sbjct: 212 RLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGELNADEPKSGKTWTLEGESDDEYENARP 271
Query: 667 VA-----------------------NSNE-----------------EVDPLDAFMNSVVL 608
N NE E+DPLDAFMNS+VL
Sbjct: 272 TETDMDVDENSKPLVDGEQIAVNFNNGNEAAASPPQDSIGGDAADDEIDPLDAFMNSMVL 331
Query: 607 PEVQKLNNQESSTI--DKMLE-PEKDPKEGLVNGNQPKKGRKKSLGRIIPGEDSDSDYYG 437
PEV+KLN E T+ DK++E +D G ++ KS+GRIIPGEDSD+DY G
Sbjct: 332 PEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRRISNKSMGRIIPGEDSDTDY-G 390
Query: 436 XXXXXXXXXXXXXXEAFIKRVKKTKVEKLALVDHSMIQYPPFRKNLYTEVKEISRMTSEE 257
+ F+KRVKKTK EKL++VDHS + Y PFRKN Y EVKEISRMT EE
Sbjct: 391 DLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEE 450
Query: 256 VATYRKQLELKIYGKDVPKPIKTWIQTGSTSKVLDIIKRLGYEKPMPVQAQALPIIMSGR 77
VA YRKQLELKI+GKDVPKP+KTW QTG TSK+L+ IK+L YEKPMP+QAQALPI+MSGR
Sbjct: 451 VAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGR 510
Query: 76 DCIGVANTGSGKTLAFVLPMLRHIK 2
DCIG+A TGSGKTLAFVLPMLRHIK
Sbjct: 511 DCIGIAKTGSGKTLAFVLPMLRHIK 535
>ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
[Cucumis sativus]
Length = 1040
Score = 312 bits (800), Expect = 5e-83
Identities = 174/325 (53%), Positives = 205/325 (63%), Gaps = 43/325 (13%)
Frame = -3
Query: 847 KLDEEMDKRRKRVQEWQEMKRKKEESEKGMVGETKYDEPISGKDWNFXXXXXXXXXXXXG 668
+LDEEM+KRR+RVQEWQ+ +R KEE++ GE DEP SGK W
Sbjct: 134 RLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGELNADEPKSGKTWTLEGESDDEYENARP 193
Query: 667 VA-----------------------NSNE-----------------EVDPLDAFMNSVVL 608
N NE E+DPLDAFMNS+VL
Sbjct: 194 TETDMDVDENSKPLVDGEQIAVNFNNGNEAAASPPQDSIGGDAADDEIDPLDAFMNSMVL 253
Query: 607 PEVQKLNNQESSTI--DKMLE-PEKDPKEGLVNGNQPKKGRKKSLGRIIPGEDSDSDYYG 437
PEV+KLN E T+ DK++E +D G ++ KS+GRIIPGEDSD+DY G
Sbjct: 254 PEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRRISNKSMGRIIPGEDSDTDY-G 312
Query: 436 XXXXXXXXXXXXXXEAFIKRVKKTKVEKLALVDHSMIQYPPFRKNLYTEVKEISRMTSEE 257
+ F+KRVKKTK EKL++VDHS + Y PFRKN Y EVKEISRMT EE
Sbjct: 313 DLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEE 372
Query: 256 VATYRKQLELKIYGKDVPKPIKTWIQTGSTSKVLDIIKRLGYEKPMPVQAQALPIIMSGR 77
VA YRKQLELKI+GKDVPKP+KTW QTG TSK+L+ IK+L YEKPMP+QAQALPI+MSGR
Sbjct: 373 VAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGR 432
Query: 76 DCIGVANTGSGKTLAFVLPMLRHIK 2
DCIG+A TGSGKTLAFVLPMLRHIK
Sbjct: 433 DCIGIAKTGSGKTLAFVLPMLRHIK 457
>ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
[Cucumis sativus]
Length = 1118
Score = 312 bits (800), Expect = 5e-83
Identities = 174/325 (53%), Positives = 205/325 (63%), Gaps = 43/325 (13%)
Frame = -3
Query: 847 KLDEEMDKRRKRVQEWQEMKRKKEESEKGMVGETKYDEPISGKDWNFXXXXXXXXXXXXG 668
+LDEEM+KRR+RVQEWQ+ +R KEE++ GE DEP SGK W
Sbjct: 212 RLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGELNADEPKSGKTWTLEGESDDEYENARP 271
Query: 667 VA-----------------------NSNE-----------------EVDPLDAFMNSVVL 608
N NE E+DPLDAFMNS+VL
Sbjct: 272 TETDMDVDENSKPLVDGEQIAVNFNNGNEAAASPPQDSIGGDAADDEIDPLDAFMNSMVL 331
Query: 607 PEVQKLNNQESSTI--DKMLE-PEKDPKEGLVNGNQPKKGRKKSLGRIIPGEDSDSDYYG 437
PEV+KLN E T+ DK++E +D G ++ KS+GRIIPGEDSD+DY G
Sbjct: 332 PEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRRISNKSMGRIIPGEDSDTDY-G 390
Query: 436 XXXXXXXXXXXXXXEAFIKRVKKTKVEKLALVDHSMIQYPPFRKNLYTEVKEISRMTSEE 257
+ F+KRVKKTK EKL++VDHS + Y PFRKN Y EVKEISRMT EE
Sbjct: 391 DLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEE 450
Query: 256 VATYRKQLELKIYGKDVPKPIKTWIQTGSTSKVLDIIKRLGYEKPMPVQAQALPIIMSGR 77
VA YRKQLELKI+GKDVPKP+KTW QTG TSK+L+ IK+L YEKPMP+QAQALPI+MSGR
Sbjct: 451 VAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGR 510
Query: 76 DCIGVANTGSGKTLAFVLPMLRHIK 2
DCIG+A TGSGKTLAFVLPMLRHIK
Sbjct: 511 DCIGIAKTGSGKTLAFVLPMLRHIK 535