BLASTX nr result
ID: Cimicifuga21_contig00029532
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00029532
(339 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254... 191 7e-47
ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|2... 175 4e-42
ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinu... 170 1e-40
ref|XP_003623558.1| Chromosome condensation regulator-like prote... 170 1e-40
ref|XP_002883417.1| regulator of chromosome condensation family ... 167 6e-40
>ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
Length = 1082
Score = 191 bits (484), Expect = 7e-47
Identities = 89/112 (79%), Positives = 97/112 (86%)
Frame = +2
Query: 2 GSLADGSLKSFPSKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGR 181
G L DGS+ FP K DVL PK+LES+VVLDVHQIACGVRH ALVTRQGEVFTWGEESGGR
Sbjct: 239 GVLPDGSVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGR 298
Query: 182 LGHGIDKVSNRPQLVEFLAVNQVEYVACGEYHTCAISVAGDLFIWGDGTHNA 337
LGHGID +RP LVEFLAVN V++VACGEYHTCA+S +GDLF WGDGTHNA
Sbjct: 299 LGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNA 350
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +2
Query: 44 TDVLLPKALESDVVLD-VHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRPQ 220
+D LP ++ +V + V +I+CG H A++T + EVFTWG + GRLGHG + P
Sbjct: 525 SDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPT 584
Query: 221 LVEFLAVNQVEYVACGEYHTCAISV 295
VE L V+ ++CG T +I +
Sbjct: 585 FVEALKDRNVKSISCGSNFTASICI 609
Score = 61.6 bits (148), Expect = 6e-08
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Frame = +2
Query: 86 LDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRPQLVEFLAVNQVEYVAC 265
L V +ACG H+AL T G++FT+G+ + G LGHG + P+ V+ L+ + VAC
Sbjct: 374 LQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVAC 433
Query: 266 GEYHTCAI----SVAG------DLFIWGDG 325
G +HT AI S +G LF WGDG
Sbjct: 434 GVWHTAAIIEVMSQSGTNISSRKLFTWGDG 463
Score = 60.5 bits (145), Expect = 1e-07
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +2
Query: 38 SKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRP 217
SK LLP + + + + HQ+ACG +T G VFT G + G+LG+ + P
Sbjct: 472 SKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSD-GRLP 530
Query: 218 QLVEFLAVNQ-VEYVACGEYHTCAISVAGDLFIWGDGTH 331
LV+ V + VE ++CG YH ++ ++F WG G +
Sbjct: 531 CLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGAN 569
>ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|222851492|gb|EEE89039.1|
predicted protein [Populus trichocarpa]
Length = 1109
Score = 175 bits (443), Expect = 4e-42
Identities = 81/112 (72%), Positives = 93/112 (83%)
Frame = +2
Query: 2 GSLADGSLKSFPSKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGR 181
G DGS+ S P+K DVL PK LES+VVLDVHQI+CGVRH ALVTRQGEVFTWGEESGGR
Sbjct: 237 GVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGR 296
Query: 182 LGHGIDKVSNRPQLVEFLAVNQVEYVACGEYHTCAISVAGDLFIWGDGTHNA 337
LGHGI+ P+LVE LAV ++YVACGEYHTCAIS +GDLF WGDG++N+
Sbjct: 297 LGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNS 348
Score = 63.2 bits (152), Expect = 2e-08
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Frame = +2
Query: 86 LDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRPQLVEFLAVNQVEYVAC 265
L V IACG H+AL T G++FT+G+ + G LGHG K + P+ ++ L + VAC
Sbjct: 372 LQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVAC 431
Query: 266 GEYHTCAI----SVAGD------LFIWGDG 325
G +HT AI S +G LF WGDG
Sbjct: 432 GVWHTAAIVEVMSQSGSNISSRKLFTWGDG 461
Score = 60.8 bits (146), Expect = 1e-07
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +2
Query: 92 VHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRPQLVEFLAVNQVEYVACGE 271
V +I+CG H A++T + EVFTWG + G+LGHG + P LVE L V+ ++CG
Sbjct: 540 VEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGA 599
Query: 272 YHTCAISV 295
T +I +
Sbjct: 600 NFTSSICI 607
Score = 57.8 bits (138), Expect = 9e-07
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +2
Query: 38 SKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRP 217
+K LLP + S + + Q+ACG +T G VFT G + G+LG+ P
Sbjct: 470 NKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSN-GKIP 528
Query: 218 QLVEFLAVNQ-VEYVACGEYHTCAISVAGDLFIWGDGTH 331
LV+ V + VE ++CG YHT ++ ++F WG G +
Sbjct: 529 CLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGAN 567
>ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526683|gb|EEF28920.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 1097
Score = 170 bits (431), Expect = 1e-40
Identities = 79/108 (73%), Positives = 90/108 (83%)
Frame = +2
Query: 14 DGSLKSFPSKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHG 193
DGS+ S P K DVL PK LES+VVLDV QIACGVRH ALVTRQGEVFTWGEESGGRLGHG
Sbjct: 241 DGSMSSVPIKNDVLTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHG 300
Query: 194 IDKVSNRPQLVEFLAVNQVEYVACGEYHTCAISVAGDLFIWGDGTHNA 337
+ + P+LVEFLAV V++VACGEYHTCA++ +GDL+ WGDGT NA
Sbjct: 301 FETDFSCPRLVEFLAVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNA 348
Score = 65.1 bits (157), Expect = 6e-09
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Frame = +2
Query: 86 LDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRPQLVEFLAVNQVEYVAC 265
L V IACG H+AL T G++FT+G+ + G LGHG + + P+ V+ L+ + VAC
Sbjct: 372 LQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVAC 431
Query: 266 GEYHTCAI----SVAG------DLFIWGDGTHN 334
G +HT AI S +G LF WGDG N
Sbjct: 432 GVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKN 464
Score = 63.9 bits (154), Expect = 1e-08
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 GSLADGSLKSFPSKTDVLLPKALESDVVLD-VHQIACGVRHAALVTRQGEVFTWGEESGG 178
G A G L + S D +P ++ +V + V +++CG H A++T + E++TWG+ + G
Sbjct: 511 GGTAHGQLGNPAS--DGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGANG 568
Query: 179 RLGHGIDKVSNRPQLVEFLAVNQVEYVACGEYHTCAISV 295
RLGHG + P LVE L V+ ++CG T +I +
Sbjct: 569 RLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSICI 607
Score = 61.6 bits (148), Expect = 6e-08
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +2
Query: 38 SKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRP 217
SK LLP + S + + HQIACG +T G VFT G + G+LG+ P
Sbjct: 470 SKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLGNPASD-GKMP 528
Query: 218 QLVEFLAVNQ-VEYVACGEYHTCAISVAGDLFIWGDGTH 331
LV+ V + VE V+CG +H ++ +L+ WG G +
Sbjct: 529 TLVQDSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGAN 567
>ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
truncatula] gi|355498573|gb|AES79776.1| Chromosome
condensation regulator-like protein [Medicago
truncatula]
Length = 1108
Score = 170 bits (430), Expect = 1e-40
Identities = 82/107 (76%), Positives = 89/107 (83%)
Frame = +2
Query: 14 DGSLKSFPSKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHG 193
DG+ FPS TDVL+PK LES VVLDVHQIA GVRH ALVTRQGEVFTWGEESGGRLGHG
Sbjct: 240 DGNGTQFPSTTDVLVPKPLESSVVLDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGHG 299
Query: 194 IDKVSNRPQLVEFLAVNQVEYVACGEYHTCAISVAGDLFIWGDGTHN 334
IDK RPQLVEFLAV VE VACGE HTCA+S++ +LF WGDG +N
Sbjct: 300 IDKDFGRPQLVEFLAVTNVESVACGENHTCAVSISDELFSWGDGKYN 346
Score = 62.0 bits (149), Expect = 5e-08
Identities = 35/97 (36%), Positives = 51/97 (52%)
Frame = +2
Query: 5 SLADGSLKSFPSKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGRL 184
SL+DG K +L+ AL + V +I+CG H A +T + E++TWG+ + GRL
Sbjct: 520 SLSDG-------KIPILVQDALVGEFV---EEISCGAHHVAALTSRSELYTWGKGANGRL 569
Query: 185 GHGIDKVSNRPQLVEFLAVNQVEYVACGEYHTCAISV 295
GHG P LVE L V+ ++CG T I +
Sbjct: 570 GHGDIDDRKSPTLVEALKERHVKNISCGSSFTSCICI 606
Score = 60.8 bits (146), Expect = 1e-07
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = +2
Query: 86 LDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRPQLVEFLAVNQVEYVAC 265
L V IACG H+AL T G++FT+G+ + G LGHG + P+ V+ L+ + VAC
Sbjct: 371 LQVISIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTITVAC 430
Query: 266 GEYHTCAI----------SVAGDLFIWGDG 325
G +HT AI + LF WGDG
Sbjct: 431 GVWHTAAIVEVTFQSGSNVSSRKLFTWGDG 460
Score = 57.0 bits (136), Expect = 2e-06
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +2
Query: 38 SKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRP 217
+K L P + + + + HQIACG +T G +FT G G+LG+ + P
Sbjct: 469 NKETYLQPTCVSTLIEYNFHQIACGHTMTIALTTSGHLFTMGGTEFGQLGNSLSD-GKIP 527
Query: 218 QLVEFLAVNQ-VEYVACGEYHTCAISVAGDLFIWGDGTH 331
LV+ V + VE ++CG +H A++ +L+ WG G +
Sbjct: 528 ILVQDALVGEFVEEISCGAHHVAALTSRSELYTWGKGAN 566
>ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata] gi|297329257|gb|EFH59676.1|
regulator of chromosome condensation family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1043
Score = 167 bits (424), Expect = 6e-40
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = +2
Query: 2 GSLADGSLKSFPSKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGR 181
G L DG++ KTDVL P+ LES+VVLDVHQI CGVRH ALVTRQGEVFTWGEE GGR
Sbjct: 223 GILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGR 282
Query: 182 LGHGIDKVSNRPQLVEFLAVNQVEYVACGEYHTCAISVAGDLFIWGDGTHN 334
LGHGI +RP+LVEFLA+ +++VACGEYHTC +S +GDLF WGDG HN
Sbjct: 283 LGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHN 333
Score = 64.7 bits (156), Expect = 7e-09
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 GSLADGSLKSFPSKTDVLLPKALESDVVLD-VHQIACGVRHAALVTRQGEVFTWGEESGG 178
G A G L + S +D LP ++ +V + V +IACG H A++T + EVFTWG+ + G
Sbjct: 497 GGTAHGQLGN--SISDGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRSEVFTWGKGANG 554
Query: 179 RLGHGIDKVSNRPQLVEFLAVNQVEYVACGEYHTCAISV 295
RLGHG + P VE L V+ ++CG T +I +
Sbjct: 555 RLGHGDTEDKRTPTCVEALRDRHVKSLSCGSNFTSSICI 593
Score = 62.8 bits (151), Expect = 3e-08
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +2
Query: 38 SKTDVLLPKALESDVVLDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRP 217
+K LLP + S + + H+IACG +T G VFT G + G+LG+ I P
Sbjct: 456 NKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISD-GKLP 514
Query: 218 QLVEFLAVNQ-VEYVACGEYHTCAISVAGDLFIWGDGTH 331
LV+ V + VE +ACG++H ++ ++F WG G +
Sbjct: 515 CLVQDRLVGEFVEEIACGDHHVAVLTSRSEVFTWGKGAN 553
Score = 60.5 bits (145), Expect = 1e-07
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Frame = +2
Query: 86 LDVHQIACGVRHAALVTRQGEVFTWGEESGGRLGHGIDKVSNRPQLVEFLAVNQVEYVAC 265
L V +ACG H+AL T G++FT+G+ + G LGHG + + P+ V+ L + VAC
Sbjct: 358 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVAC 417
Query: 266 GEYHTCAI-SVAGD---------LFIWGDGTHN 334
+HT AI V G LF WGDG N
Sbjct: 418 SIWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKN 450