BLASTX nr result

ID: Cimicifuga21_contig00029529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029529
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...   117   7e-25
emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]   117   1e-24
emb|CBI34670.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002303590.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15

>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score =  117 bits (294), Expect = 7e-25
 Identities = 70/144 (48%), Positives = 94/144 (65%), Gaps = 3/144 (2%)
 Frame = -3

Query: 426 MGLDTELEFDKYCKVVRNPKVGRISHHHNSKAEARVEKGKPSTRSYLLRNLDDDFTEISF 247
           M LD EL+F+KYC +  +P+    S+        R  K KP+ RS LL ++++DF EISF
Sbjct: 1   MQLDMELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLL-SIEEDFAEISF 59

Query: 246 GXXXXXSCKSMAYLPAGVAGNQSVKRDSMYQSSKEVRKMKKMGSLEGRQKIEL--CSDTS 73
           G     SCKS+ Y P GV GN  +KR S+YQSS+EVRK KKMG++EGR+KIEL   SD+S
Sbjct: 60  GDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIELSRSSDSS 119

Query: 72  LSFRIFDS-SLSDKTCQLIDQNRS 4
             FRI DS   SD+   ++++ RS
Sbjct: 120 FPFRIVDSLCSSDEEDPVLEEKRS 143


>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score =  117 bits (292), Expect = 1e-24
 Identities = 69/145 (47%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
 Frame = -3

Query: 429 SMGLDTELEFDKYCKVVRNPKVGRISHHHNSKAEARVEKGKPSTRSYLLRNLDDDFTEIS 250
           ++ LD EL+F+KYC +  +P+    S+        R  K KP+ RS LL ++++DF EIS
Sbjct: 179 TLKLDMELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLL-SIEEDFAEIS 237

Query: 249 FGXXXXXSCKSMAYLPAGVAGNQSVKRDSMYQSSKEVRKMKKMGSLEGRQKIEL--CSDT 76
           FG     SCKS+ Y P GV GN  +KR S+YQSS+EVRK KKMG++EGR+KIEL   SD+
Sbjct: 238 FGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIELSRSSDS 297

Query: 75  SLSFRIFDS-SLSDKTCQLIDQNRS 4
           S  FRI DS   SD+   ++++ RS
Sbjct: 298 SFPFRIVDSLCSSDEEDPVLEEKRS 322


>emb|CBI34670.3| unnamed protein product [Vitis vinifera]
          Length = 1085

 Score =  114 bits (285), Expect = 8e-24
 Identities = 66/129 (51%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
 Frame = -3

Query: 429 SMGLDTELEFDKYCKVVRNPKVGRISHHHNSKAEARVEKGKPSTRSYLLRNLDDDFTEIS 250
           S  LD EL+F+KYC +  +P+    S+        R  K KP+ RS LL ++++DF EIS
Sbjct: 562 STKLDMELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLL-SIEEDFAEIS 620

Query: 249 FGXXXXXSCKSMAYLPAGVAGNQSVKRDSMYQSSKEVRKMKKMGSLEGRQKIEL--CSDT 76
           FG     SCKS+ Y P GV GN  +KR S+YQSS+EVRK KKMG++EGR+KIEL   SD+
Sbjct: 621 FGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIELSRSSDS 680

Query: 75  SLSFRIFDS 49
           S  FRI DS
Sbjct: 681 SFPFRIVDS 689


>ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|222846790|gb|EEE84337.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 61/138 (44%), Positives = 81/138 (58%), Gaps = 4/138 (2%)
 Frame = -3

Query: 426 MGLDTELEFDKYCKVVRNPKVGRISHHHNSKAEARVEKGKPSTRSYLLRNLDDDFTEISF 247
           M L+ EL+ +K      +P    + H   S+ E R   GK + +  +LR + + FTEISF
Sbjct: 1   MELEMELDSEKSSISDLSPNTV-LPHRRCSEVEKRSVNGKLTRKDDILR-VKESFTEISF 58

Query: 246 GXXXXXSCKSMAYLPAGVAGNQSVKRDSMYQSSKEVRKMKKMGSLEGRQKIEL--CSDTS 73
                 SCK++   P G  G+   KR SMYQSS+EVR+MK+MG  EGR+KIEL   SDTS
Sbjct: 59  RRYRSSSCKNVLSRPVGSEGHIEPKRGSMYQSSREVRRMKEMGCNEGRRKIELSRASDTS 118

Query: 72  LSFRIFDS--SLSDKTCQ 25
            SFRI DS   L ++T Q
Sbjct: 119 FSFRIVDSLHCLDEETLQ 136


>ref|XP_002303590.1| predicted protein [Populus trichocarpa] gi|222841022|gb|EEE78569.1|
           predicted protein [Populus trichocarpa]
          Length = 734

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
 Frame = -3

Query: 357 ISHHHNSKAEARVEKGKPSTRSYLLRNLDDDFTEISFGXXXXXSCKSMAYLPAGVAGNQS 178
           + H   SKAE R   GK + +  +LR + + FT+ISF      SCK++   P G+ GN  
Sbjct: 19  LPHRRCSKAEKRNANGKLTRKDDILR-MKEGFTDISFRHYRSSSCKNVPSRPVGLQGNIE 77

Query: 177 VKRDSMYQSSKEVRKMKKMGSLEGRQKIEL--CSDTSLSFRIFDSSLS 40
           +KR S+YQSS+EVR+ K+MGS  GR+ IEL   SDTS SFRI DS  S
Sbjct: 78  LKRGSIYQSSREVRRTKEMGSNGGRRTIELSRASDTSFSFRIVDSLCS 125