BLASTX nr result

ID: Cimicifuga21_contig00029520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029520
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002966682.1| hypothetical protein SELMODRAFT_36118 [Selag...    41   4e-08
gb|ABK92504.1| unknown [Populus trichocarpa]                           44   6e-08
ref|XP_002331189.1| predicted protein [Populus trichocarpa] gi|2...    44   6e-08
ref|XP_001763188.1| predicted protein [Physcomitrella patens sub...    41   1e-07
ref|XP_001761349.1| predicted protein [Physcomitrella patens sub...    41   1e-07

>ref|XP_002966682.1| hypothetical protein SELMODRAFT_36118 [Selaginella moellendorffii]
           gi|302792579|ref|XP_002978055.1| hypothetical protein
           SELMODRAFT_36138 [Selaginella moellendorffii]
           gi|300154076|gb|EFJ20712.1| hypothetical protein
           SELMODRAFT_36138 [Selaginella moellendorffii]
           gi|300166102|gb|EFJ32709.1| hypothetical protein
           SELMODRAFT_36118 [Selaginella moellendorffii]
          Length = 213

 Score = 41.2 bits (95), Expect(2) = 4e-08
 Identities = 19/35 (54%), Positives = 21/35 (60%)
 Frame = +2

Query: 311 PWDIYQSASNIFREPRLFIFTKPKTDHQPIKKAHL 415
           P        N F EPRL I T P+TDHQPIK+A L
Sbjct: 99  PGTFTNQLQNSFSEPRLLILTDPRTDHQPIKEAAL 133



 Score = 41.2 bits (95), Expect(2) = 4e-08
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +1

Query: 400 QESSFGNIPNIVFCDTDFPTRYVDIGI 480
           +E++ GNIP I FCDTD P +YVDI I
Sbjct: 129 KEAALGNIPVIAFCDTDSPMKYVDIAI 155


>gb|ABK92504.1| unknown [Populus trichocarpa]
          Length = 310

 Score = 43.9 bits (102), Expect(2) = 6e-08
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +1

Query: 403 ESSFGNIPNIVFCDTDFPTRYVDIGI 480
           E++ GNIP I FCDTD P R+VDIGI
Sbjct: 144 EAALGNIPTIAFCDTDSPMRFVDIGI 169



 Score = 37.7 bits (86), Expect(2) = 6e-08
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +2

Query: 344 FREPRLFIFTKPKTDHQPIKKAHLETFQT 430
           F EPRL I T P+TDHQPI +A L    T
Sbjct: 124 FSEPRLLILTDPRTDHQPIMEAALGNIPT 152


>ref|XP_002331189.1| predicted protein [Populus trichocarpa] gi|222873310|gb|EEF10441.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score = 43.9 bits (102), Expect(2) = 6e-08
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +1

Query: 403 ESSFGNIPNIVFCDTDFPTRYVDIGI 480
           E++ GNIP I FCDTD P R+VDIGI
Sbjct: 135 EAALGNIPTIAFCDTDSPMRFVDIGI 160



 Score = 37.7 bits (86), Expect(2) = 6e-08
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +2

Query: 344 FREPRLFIFTKPKTDHQPIKKAHLETFQT 430
           F EPRL I T P+TDHQPI +A L    T
Sbjct: 115 FSEPRLLILTDPRTDHQPIMEAALGNIPT 143


>ref|XP_001763188.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162685671|gb|EDQ72065.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 305

 Score = 40.8 bits (94), Expect(2) = 1e-07
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +1

Query: 403 ESSFGNIPNIVFCDTDFPTRYVDIGI 480
           E++ GNIP I FCDTD P +YVDI I
Sbjct: 128 EAALGNIPVIAFCDTDSPMKYVDIAI 153



 Score = 40.0 bits (92), Expect(2) = 1e-07
 Identities = 24/50 (48%), Positives = 28/50 (56%)
 Frame = +2

Query: 266 QYTLCL*SVLIRVTYPWDIYQSASNIFREPRLFIFTKPKTDHQPIKKAHL 415
           QYT C  ++  R T P        N F EPRL I T P+TDHQPI +A L
Sbjct: 84  QYTGCQ-AIAGRHT-PGTFTNQLQNTFSEPRLLILTDPRTDHQPIMEAAL 131


>ref|XP_001761349.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687355|gb|EDQ73738.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 292

 Score = 40.8 bits (94), Expect(2) = 1e-07
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +1

Query: 403 ESSFGNIPNIVFCDTDFPTRYVDIGI 480
           E++ GNIP I FCDTD P +YVDI I
Sbjct: 127 EAALGNIPVIAFCDTDSPMKYVDIAI 152



 Score = 40.0 bits (92), Expect(2) = 1e-07
 Identities = 24/50 (48%), Positives = 28/50 (56%)
 Frame = +2

Query: 266 QYTLCL*SVLIRVTYPWDIYQSASNIFREPRLFIFTKPKTDHQPIKKAHL 415
           QYT C  ++  R T P        N F EPRL I T P+TDHQPI +A L
Sbjct: 83  QYTGCQ-AIAGRHT-PGTFTNQLQNTFSEPRLLILTDPRTDHQPIMEAAL 130