BLASTX nr result

ID: Cimicifuga21_contig00029515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029515
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152296.1| PREDICTED: uncharacterized protein LOC101217...   108   6e-22
gb|ABK94599.1| unknown [Populus trichocarpa]                          107   8e-22
ref|XP_002332721.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_002533442.1| conserved hypothetical protein [Ricinus comm...   100   9e-20
gb|EEE51949.1| hypothetical protein OsJ_33587 [Oryza sativa Japo...    97   2e-18

>ref|XP_004152296.1| PREDICTED: uncharacterized protein LOC101217783 [Cucumis sativus]
          Length = 252

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/67 (71%), Positives = 54/67 (80%)
 Frame = +3

Query: 204 PSKVSSIRTSINIQTKQNCRNTVQGRYLLSDDNGHVCDALSVDPWSRCCPETGNKFSCHG 383
           PS +SSIRT+I +    +CR+TVQGRYLLSDDNG+VCDALSVDP SRCC   G KF CHG
Sbjct: 20  PSTISSIRTNIGLAVNSSCRSTVQGRYLLSDDNGYVCDALSVDPLSRCCHGKGEKFPCHG 79

Query: 384 CNLVSQC 404
           CNLV QC
Sbjct: 80  CNLVLQC 86


>gb|ABK94599.1| unknown [Populus trichocarpa]
          Length = 268

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/66 (72%), Positives = 55/66 (83%)
 Frame = +3

Query: 207 SKVSSIRTSINIQTKQNCRNTVQGRYLLSDDNGHVCDALSVDPWSRCCPETGNKFSCHGC 386
           S +S+IR  I  +  ++CRNTVQGRYLLSDDNG+VCDALSVDP SRCCPE G +FSC GC
Sbjct: 18  SIISAIRKDIGFEQSRSCRNTVQGRYLLSDDNGYVCDALSVDPPSRCCPENGLRFSCQGC 77

Query: 387 NLVSQC 404
           NLVSQC
Sbjct: 78  NLVSQC 83


>ref|XP_002332721.1| predicted protein [Populus trichocarpa] gi|222832884|gb|EEE71361.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/60 (75%), Positives = 50/60 (83%)
 Frame = +3

Query: 225 RTSINIQTKQNCRNTVQGRYLLSDDNGHVCDALSVDPWSRCCPETGNKFSCHGCNLVSQC 404
           R  I  +  ++CRNTVQGRYLLSDDNG+VCDALSVDP SRCCPE G +FSC GCNLVSQC
Sbjct: 1   RKDIGFEQSRSCRNTVQGRYLLSDDNGYVCDALSVDPPSRCCPENGLRFSCQGCNLVSQC 60


>ref|XP_002533442.1| conserved hypothetical protein [Ricinus communis]
           gi|223526704|gb|EEF28938.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 251

 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/64 (68%), Positives = 49/64 (76%)
 Frame = +3

Query: 213 VSSIRTSINIQTKQNCRNTVQGRYLLSDDNGHVCDALSVDPWSRCCPETGNKFSCHGCNL 392
           + SIR  I     + CR TVQGR+LLSDDNGHVCDALS+DP SRCCP  G KFSCHGCNL
Sbjct: 27  IFSIRRDIGFHEMKICRTTVQGRFLLSDDNGHVCDALSLDPQSRCCPVRGEKFSCHGCNL 86

Query: 393 VSQC 404
           +S C
Sbjct: 87  LSHC 90


>gb|EEE51949.1| hypothetical protein OsJ_33587 [Oryza sativa Japonica Group]
          Length = 276

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 40/67 (59%), Positives = 50/67 (74%)
 Frame = +3

Query: 204 PSKVSSIRTSINIQTKQNCRNTVQGRYLLSDDNGHVCDALSVDPWSRCCPETGNKFSCHG 383
           P  V+ IR  I +     CR+TVQGR+L+SDDNG+VC +LS+DPWSRCCP TG++FSC G
Sbjct: 25  PGLVAGIRKDIGLAAPIMCRSTVQGRHLISDDNGYVCSSLSIDPWSRCCPRTGSRFSCQG 84

Query: 384 CNLVSQC 404
           C L  QC
Sbjct: 85  CKLDLQC 91


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