BLASTX nr result

ID: Cimicifuga21_contig00029511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029511
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   102   3e-20
emb|CBI18100.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
ref|XP_003623391.1| Integrator complex subunit [Medicago truncat...    91   7e-17

>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/86 (56%), Positives = 65/86 (75%)
 Frame = -2

Query: 268 QQTHMHMFLGSLVDSNTLIRHATRKILRLMKLADMAIFKSVTNGLLTNLESYPEDETDIF 89
           Q+THMHMFLG+LVD++T IR   RKILRLMKL D+ +F+S  +GLL NLE YP+DE DI 
Sbjct: 396 QETHMHMFLGTLVDNSTFIRSTARKILRLMKLHDLKMFQSSIDGLLENLEVYPQDEADIL 455

Query: 88  NVLFNIGRSRSSFAANFMTETFQEVE 11
           +VLF+IGR+  +F    + +  QE+E
Sbjct: 456 SVLFDIGRNHGNFVVCIIKKFSQEIE 481


>emb|CBI18100.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/86 (56%), Positives = 65/86 (75%)
 Frame = -2

Query: 268 QQTHMHMFLGSLVDSNTLIRHATRKILRLMKLADMAIFKSVTNGLLTNLESYPEDETDIF 89
           Q+THMHMFLG+LVD++T IR   RKILRLMKL D+ +F+S  +GLL NLE YP+DE DI 
Sbjct: 396 QETHMHMFLGTLVDNSTFIRSTARKILRLMKLHDLKMFQSSIDGLLENLEVYPQDEADIL 455

Query: 88  NVLFNIGRSRSSFAANFMTETFQEVE 11
           +VLF+IGR+  +F    + +  QE+E
Sbjct: 456 SVLFDIGRNHGNFVVCIIKKFSQEIE 481


>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/86 (54%), Positives = 63/86 (73%)
 Frame = -2

Query: 268 QQTHMHMFLGSLVDSNTLIRHATRKILRLMKLADMAIFKSVTNGLLTNLESYPEDETDIF 89
           Q+ HMHMFLGSL+D+  LIR   RKI +L+KL+D  +F+S  +GLL NLE Y +DE D+F
Sbjct: 382 QEIHMHMFLGSLLDNCDLIRSIARKIFKLVKLSDFKLFRSSIHGLLQNLERYTKDEADVF 441

Query: 88  NVLFNIGRSRSSFAANFMTETFQEVE 11
           +VLF +GRS  +FAA  + E  QE+E
Sbjct: 442 SVLFFMGRSHGNFAARVVKEVSQEIE 467


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
           gi|223533988|gb|EEF35710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 890

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/86 (48%), Positives = 62/86 (72%)
 Frame = -2

Query: 268 QQTHMHMFLGSLVDSNTLIRHATRKILRLMKLADMAIFKSVTNGLLTNLESYPEDETDIF 89
           Q+ HMHMFLG+L+D+N +IR A RK+ + +KL  M +F+   +GLL NL+ YP+DE D+F
Sbjct: 367 QEMHMHMFLGTLIDNNDIIRTAARKVYKYVKLPSMELFRLSIDGLLGNLDIYPQDEADVF 426

Query: 88  NVLFNIGRSRSSFAANFMTETFQEVE 11
           +VLF +GRS   F  + + E +QE+E
Sbjct: 427 SVLFYMGRSHKDFTTSIIKEAYQEIE 452


>ref|XP_003623391.1| Integrator complex subunit [Medicago truncatula]
           gi|355498406|gb|AES79609.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 906

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/86 (47%), Positives = 64/86 (74%)
 Frame = -2

Query: 268 QQTHMHMFLGSLVDSNTLIRHATRKILRLMKLADMAIFKSVTNGLLTNLESYPEDETDIF 89
           Q+ H+HMFLG+L+D++  +R A RKIL+++KL ++A+FKS  + LL NL+ Y +DE D+F
Sbjct: 350 QEKHLHMFLGALLDNSREVRCAERKILKIVKLNNLAMFKSSIDRLLENLDRYAQDEADVF 409

Query: 88  NVLFNIGRSRSSFAANFMTETFQEVE 11
           +V  N+GR+   F  + + ETF+EVE
Sbjct: 410 SVCSNLGRNHKKFVCSIIKETFEEVE 435


Top