BLASTX nr result

ID: Cimicifuga21_contig00029503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029503
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16901.3| unnamed protein product [Vitis vinifera]               61   1e-07
emb|CAN73732.1| hypothetical protein VITISV_022576 [Vitis vinifera]    61   1e-07
ref|XP_002329304.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002305310.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002329305.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06

>emb|CBI16901.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/96 (34%), Positives = 47/96 (48%)
 Frame = +1

Query: 61  ATNSTTNESWRWNSPXXXXXXXXXXXXXXXXXXXXXXXCSHCKYPDDISSPDDDMENPVK 240
           A +S+++E WRWNS                        CSH K      SPD D + P K
Sbjct: 4   ANSSSSSEIWRWNSLLPYLFGGLALIIGLIVVALIILSCSHKKRTP---SPDHDKDKPAK 60

Query: 241 HALPQPEFEPKILVVMAGNTEPTYLAKPVSSVYTGS 348
               +P+  P+++V+MAG+  PTYLA PV ++ T S
Sbjct: 61  TICTEPDTLPRVVVIMAGDENPTYLATPVPALTTAS 96


>emb|CAN73732.1| hypothetical protein VITISV_022576 [Vitis vinifera]
          Length = 101

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/94 (35%), Positives = 46/94 (48%)
 Frame = +1

Query: 61  ATNSTTNESWRWNSPXXXXXXXXXXXXXXXXXXXXXXXCSHCKYPDDISSPDDDMENPVK 240
           A +S+++E WRWNSP                       CSH K     SSPD   + P K
Sbjct: 4   ANSSSSSEIWRWNSPFPYLFGGFALILGLIVVALIILSCSHKKRT---SSPDHVKDKPPK 60

Query: 241 HALPQPEFEPKILVVMAGNTEPTYLAKPVSSVYT 342
               +P+  P+++V+MAG+  PTYLA PV +  T
Sbjct: 61  TICTEPDTLPRVIVIMAGDENPTYLATPVPAAST 94


>ref|XP_002329304.1| predicted protein [Populus trichocarpa] gi|222870758|gb|EEF07889.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/95 (37%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
 Frame = +1

Query: 61  ATNSTTNES-----WRWNSPXXXXXXXXXXXXXXXXXXXXXXXCSHCKYPDDISSPDDDM 225
           ATNST  +      W WNSP                       CS+ K     S  D   
Sbjct: 4   ATNSTAVDGTHGGFWHWNSPVVYFFVGLAFMLGLITVALIILACSYRKSLSSSSRSDAGD 63

Query: 226 ENPVKHALPQPEFEPKILVVMAGNTEPTYLAKPVS 330
           E P KH   Q + EPKI V+MAG+  PTYL KPVS
Sbjct: 64  EKPAKHEEIQVDLEPKIAVIMAGDENPTYLLKPVS 98


>ref|XP_002305310.1| predicted protein [Populus trichocarpa] gi|222848274|gb|EEE85821.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
 Frame = +1

Query: 61  ATNSTTNES-----WRWNSPXXXXXXXXXXXXXXXXXXXXXXXCSHCKYPDDISSPDDDM 225
           +TNST   S     W WNSP                       CS  K   + S+ + + 
Sbjct: 4   STNSTAGGSAHGGFWHWNSPVAYVFVGLAFMLGLITVSLIILACSSGKSLSNSSTSEAED 63

Query: 226 ENPVKHALPQPEFEPKILVVMAGNTEPTYLAKPVS 330
           E   K    Q EFEP I+V+MAG+  PTYLAKPVS
Sbjct: 64  EKSAKQVEIQVEFEPNIVVIMAGDDNPTYLAKPVS 98


>ref|XP_002329305.1| predicted protein [Populus trichocarpa] gi|222870759|gb|EEF07890.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
 Frame = +1

Query: 52  PAIATNSTTNESWRWNSPXXXXXXXXXXXXXXXXXXXXXXXCSHCKYPDDISSPDDDM-E 228
           P++         W WNSP                       CS+ K   + S  + ++ E
Sbjct: 7   PSVGGGGAHGGFWHWNSPVAYVFVGLALMLGLITVALIILACSYRKSLSNSSRREAELDE 66

Query: 229 NPVKHALPQPEFEPKILVVMAGNTEPTYLAKPVS 330
            P K    Q +FEPK++V+MAG+  PTYLAKPVS
Sbjct: 67  KPAKQVEIQVDFEPKVVVIMAGDENPTYLAKPVS 100


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