BLASTX nr result

ID: Cimicifuga21_contig00029489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029489
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29649.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]    73   2e-11
tpg|DAA49887.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea m...    70   2e-10
ref|XP_002889798.1| glutamine-rich protein23 [Arabidopsis lyrata...    70   2e-10

>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/94 (36%), Positives = 59/94 (62%)
 Frame = -1

Query: 282 KLCDIGMIAEADKLFGEMLDMSVAADVTTFRILFDAYFKEERTDDVLKWFKYLLFETDLK 103
           + C+ G+++EA++LFGE+   S+  DV  +R   +AYF  ER DD L+ F   + ++ L+
Sbjct: 400 RFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEAYFGMERADDALQMFNRFV-DSGLR 458

Query: 102 PSSAFVNSVFNRVINKGRIEESGEILGRIPERDP 1
              +F N VF+ ++NKG+  E   +L ++ E+DP
Sbjct: 459 VIVSFANKVFDELVNKGKAGECVPVLTKMGEKDP 492


>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Vitis vinifera]
          Length = 627

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/94 (36%), Positives = 59/94 (62%)
 Frame = -1

Query: 282 KLCDIGMIAEADKLFGEMLDMSVAADVTTFRILFDAYFKEERTDDVLKWFKYLLFETDLK 103
           + C+ G+++EA++LFGE+   S+  DV  +R   +AYF  ER DD L+ F   + ++ L+
Sbjct: 400 RFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEAYFGMERADDALQMFNRFV-DSGLR 458

Query: 102 PSSAFVNSVFNRVINKGRIEESGEILGRIPERDP 1
              +F N VF+ ++NKG+  E   +L ++ E+DP
Sbjct: 459 VIVSFANKVFDELVNKGKAGECVPVLTKMGEKDP 492


>emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
          Length = 627

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/94 (36%), Positives = 59/94 (62%)
 Frame = -1

Query: 282 KLCDIGMIAEADKLFGEMLDMSVAADVTTFRILFDAYFKEERTDDVLKWFKYLLFETDLK 103
           + C+ G+++EA++LFGE+   S+  DV  +R   +AYF  ER DD L+ F   + ++ L+
Sbjct: 400 RFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEAYFGMERADDALQMFNRFV-DSGLR 458

Query: 102 PSSAFVNSVFNRVINKGRIEESGEILGRIPERDP 1
              +F N VF+ ++NKG+  E   +L ++ E+DP
Sbjct: 459 VIVSFANKVFDELVNKGKAGECVPVLTKMGEKDP 492


>tpg|DAA49887.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea mays]
          Length = 775

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = -1

Query: 285 GKLCDIGMIAEADKLFGEMLDMSVAADVTTFRILFDAYFKEERTDDVLKWFKYLLFETDL 106
           GKLC+ GM+AEA KLF EM   SV  DV T+  L D+ FKE   +D L++F  +  E   
Sbjct: 355 GKLCENGMLAEAKKLFEEMEKKSVLPDVYTYTYLVDSCFKEGYVEDTLEYFYKMADEKPH 414

Query: 105 KP--SSAFVNSVFNRVINKGRIEESGEILGRIPERD 4
            P  +  F N +F  +   GRI+++ ++ GR+P+++
Sbjct: 415 GPKFNIGFFNRMFEGLTEAGRIDDALKVYGRMPDKE 450


>ref|XP_002889798.1| glutamine-rich protein23 [Arabidopsis lyrata subsp. lyrata]
           gi|297335640|gb|EFH66057.1| glutamine-rich protein23
           [Arabidopsis lyrata subsp. lyrata]
          Length = 913

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/94 (36%), Positives = 56/94 (59%)
 Frame = -1

Query: 282 KLCDIGMIAEADKLFGEMLDMSVAADVTTFRILFDAYFKEERTDDVLKWFKYLLFETDLK 103
           + C+ GM+ EA++ F E +  S+ AD  + R + DAY K ER DD LK    ++ + +L+
Sbjct: 445 RFCEQGMLTEAERFFAEGVSKSLPADAPSHRAMIDAYLKAERMDDALKMLDRMV-DVNLR 503

Query: 102 PSSAFVNSVFNRVINKGRIEESGEILGRIPERDP 1
             + F   VF  +I  G++ ES E+L ++ ER+P
Sbjct: 504 VVADFGTRVFGELIKNGKLTESAEVLTKMGEREP 537


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