BLASTX nr result

ID: Cimicifuga21_contig00029470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029470
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis ...   187   6e-46
emb|CBI30368.3| unnamed protein product [Vitis vinifera]              187   6e-46
emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]   187   6e-46
gb|AEB96142.1| E2F protein [Cocos nucifera]                           184   6e-45
gb|AEB96141.1| E2F protein [Cocos nucifera]                           181   5e-44

>ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis vinifera]
          Length = 498

 Score =  187 bits (476), Expect = 6e-46
 Identities = 99/155 (63%), Positives = 111/155 (71%), Gaps = 4/155 (2%)
 Frame = -3

Query: 453 GNRVTSRSVQP---SGQMLQSMKRQVPFSSMKPPFVPPDDYHQFSGGGPRGVVDEKAEAI 283
           G R  +RS  P   SGQ+L+ MKR +PF+S KPPFVPPDDYH+FS     GV + + E I
Sbjct: 3   GPRAPTRSAPPPPSSGQILRPMKRHLPFTSTKPPFVPPDDYHRFSSADAHGVANHEPEGI 62

Query: 282 VVKSP-LKRKPETEDCEAESSEWTVSTGFTEVVTSPLRTPVSGKGGRIYSKSKVSKYNRS 106
           VVKSP LKRK   +D E  SSEWT S G+ +   SP RTPVSGKGGRIYSKSKVSK N  
Sbjct: 63  VVKSPQLKRKSAMDDNEVGSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSKVSKGNVC 122

Query: 105 APQTPISNTGSPSGVALTPASTCRYDSSLGLLTKK 1
            PQTP+SN GSPS   LTPA  CRYDSSLGLLTKK
Sbjct: 123 GPQTPVSNAGSPS--TLTPAGNCRYDSSLGLLTKK 155


>emb|CBI30368.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  187 bits (476), Expect = 6e-46
 Identities = 99/155 (63%), Positives = 111/155 (71%), Gaps = 4/155 (2%)
 Frame = -3

Query: 453 GNRVTSRSVQP---SGQMLQSMKRQVPFSSMKPPFVPPDDYHQFSGGGPRGVVDEKAEAI 283
           G R  +RS  P   SGQ+L+ MKR +PF+S KPPFVPPDDYH+FS     GV + + E I
Sbjct: 3   GPRAPTRSAPPPPSSGQILRPMKRHLPFTSTKPPFVPPDDYHRFSSADAHGVANHEPEGI 62

Query: 282 VVKSP-LKRKPETEDCEAESSEWTVSTGFTEVVTSPLRTPVSGKGGRIYSKSKVSKYNRS 106
           VVKSP LKRK   +D E  SSEWT S G+ +   SP RTPVSGKGGRIYSKSKVSK N  
Sbjct: 63  VVKSPQLKRKSAMDDNEVGSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSKVSKGNVC 122

Query: 105 APQTPISNTGSPSGVALTPASTCRYDSSLGLLTKK 1
            PQTP+SN GSPS   LTPA  CRYDSSLGLLTKK
Sbjct: 123 GPQTPVSNAGSPS--TLTPAGNCRYDSSLGLLTKK 155


>emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]
          Length = 735

 Score =  187 bits (476), Expect = 6e-46
 Identities = 99/155 (63%), Positives = 111/155 (71%), Gaps = 4/155 (2%)
 Frame = -3

Query: 453 GNRVTSRSVQP---SGQMLQSMKRQVPFSSMKPPFVPPDDYHQFSGGGPRGVVDEKAEAI 283
           G R  +RS  P   SGQ+L+ MKR +PF+S KPPFVPPDDYH+FS     GV + + E I
Sbjct: 3   GPRAPTRSAPPPPSSGQILRPMKRHLPFTSTKPPFVPPDDYHRFSSADAHGVANHEPEGI 62

Query: 282 VVKSP-LKRKPETEDCEAESSEWTVSTGFTEVVTSPLRTPVSGKGGRIYSKSKVSKYNRS 106
           VVKSP LKRK   +D E  SSEWT S G+ +   SP RTPVSGKGGRIYSKSKVSK N  
Sbjct: 63  VVKSPQLKRKSAMDDNEVGSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSKVSKGNVC 122

Query: 105 APQTPISNTGSPSGVALTPASTCRYDSSLGLLTKK 1
            PQTP+SN GSPS   LTPA  CRYDSSLGLLTKK
Sbjct: 123 GPQTPVSNAGSPS--TLTPAGNCRYDSSLGLLTKK 155


>gb|AEB96142.1| E2F protein [Cocos nucifera]
          Length = 451

 Score =  184 bits (467), Expect = 6e-45
 Identities = 92/152 (60%), Positives = 111/152 (73%), Gaps = 1/152 (0%)
 Frame = -3

Query: 453 GNRVTSRSVQPSGQMLQSMKRQVPFSSMKPPFVPPDDYHQFSGGGPRGVVDEKAEAIVVK 274
           GNR      Q +GQ+ Q +KR +PF S++PPFV PD+YH+FS    R + D+ A+ + VK
Sbjct: 8   GNRSAQ---QQAGQIFQPLKRHLPFPSVRPPFVAPDEYHRFSAADCRRIADDVADTLAVK 64

Query: 273 SPLKRKPETEDCEA-ESSEWTVSTGFTEVVTSPLRTPVSGKGGRIYSKSKVSKYNRSAPQ 97
           +PLKRKP+ ED EA ESSEWT S G+ E VTSPL TPVSGKGGR Y +SKV K ++S PQ
Sbjct: 65  TPLKRKPDQEDNEAAESSEWTTSPGYAEAVTSPLLTPVSGKGGRTYGRSKVGKNSKSGPQ 124

Query: 96  TPISNTGSPSGVALTPASTCRYDSSLGLLTKK 1
           TP+SN  SPS   LTP  TCRYDSSLGLLTKK
Sbjct: 125 TPMSNAWSPSSNPLTPMGTCRYDSSLGLLTKK 156


>gb|AEB96141.1| E2F protein [Cocos nucifera]
          Length = 471

 Score =  181 bits (459), Expect = 5e-44
 Identities = 94/153 (61%), Positives = 112/153 (73%), Gaps = 2/153 (1%)
 Frame = -3

Query: 453 GNRVTSRSVQPSGQMLQSMKRQVPFSSMKPPFVPPDDYHQFSGGGPRGVV-DEKAEAIVV 277
           GNR      Q +GQ+ Q +KR   F S KPPFV PD+YH+FS    R +  D+ ++A+V+
Sbjct: 8   GNRSAQ---QQAGQIFQPLKRHPLFPSAKPPFVAPDEYHRFSAADGRRITPDDVSDALVI 64

Query: 276 KSPLKRKPETEDCEA-ESSEWTVSTGFTEVVTSPLRTPVSGKGGRIYSKSKVSKYNRSAP 100
           K+PLKRKPE ED EA ESSEWT S G+ E VTSPL TPVSGKGGR + +SKV+KYN+S P
Sbjct: 65  KTPLKRKPEQEDNEAAESSEWTNSPGYAEAVTSPLLTPVSGKGGRNHGRSKVAKYNKSGP 124

Query: 99  QTPISNTGSPSGVALTPASTCRYDSSLGLLTKK 1
            TP+SN GSPS   LTP  TCRYDSSLGLLTKK
Sbjct: 125 LTPLSNAGSPSSNPLTPVGTCRYDSSLGLLTKK 157


Top