BLASTX nr result

ID: Cimicifuga21_contig00029466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029466
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65986.1| hypothetical protein VITISV_042143 [Vitis vinifera]    86   3e-20
ref|XP_002534720.1| conserved hypothetical protein [Ricinus comm...    93   2e-17

>emb|CAN65986.1| hypothetical protein VITISV_042143 [Vitis vinifera]
          Length = 138

 Score = 85.9 bits (211), Expect(2) = 3e-20
 Identities = 39/40 (97%), Positives = 40/40 (100%)
 Frame = +1

Query: 13  GGGITPFSKEPYVTLSRHTAPSRNQDLPFPLTNGSSNQPV 132
           GGGITPFSKEPYVTLSRHTAPSRN+DLPFPLTNGSSNQPV
Sbjct: 20  GGGITPFSKEPYVTLSRHTAPSRNKDLPFPLTNGSSNQPV 59



 Score = 37.4 bits (85), Expect(2) = 3e-20
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +3

Query: 147 PFHSFID*FKVALACFQAQALAVEASRQK 233
           PF+S      VA+ACFQ QALAVEASRQK
Sbjct: 61  PFYS-----SVAVACFQVQALAVEASRQK 84


>ref|XP_002534720.1| conserved hypothetical protein [Ricinus communis]
           gi|223524693|gb|EEF27662.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 77

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/50 (84%), Positives = 44/50 (88%), Gaps = 1/50 (2%)
 Frame = +3

Query: 3   GPDRWWYHTLLKGTVRDTLASYGSVPESG-PPLSFDQRVLEPTCPCMEVP 149
           GPDRWWYHTLLKGTVRDTLASYGS PESG PP SFDQRVLEPT P ++ P
Sbjct: 9   GPDRWWYHTLLKGTVRDTLASYGSAPESGPPPFSFDQRVLEPTFPALDAP 58


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