BLASTX nr result

ID: Cimicifuga21_contig00029429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029429
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513454.1| conserved hypothetical protein [Ricinus comm...   158   4e-37
ref|XP_003539058.1| PREDICTED: uncharacterized protein LOC100780...   149   3e-34
emb|CBI16420.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002283009.1| PREDICTED: uncharacterized protein LOC100243...   118   4e-25
ref|NP_001190298.1| transducin/WD40 domain-containing protein [A...   106   2e-21

>ref|XP_002513454.1| conserved hypothetical protein [Ricinus communis]
           gi|223547362|gb|EEF48857.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 486

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/121 (61%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 LDGRFSLKYRREASALMLKSYTEVGAFPHFYHVGGARCPTHMNRVMNAAG-DQQVPLRRE 186
           L GRF  KYR   SAL+++SYTE+GAFPHFYHV G  C TH+NR+  A   D   P+  +
Sbjct: 28  LQGRFEPKYRHHLSALLIQSYTEIGAFPHFYHVDGVPCQTHLNRLARAVNMDPPFPITSQ 87

Query: 185 GISGLEFDSKGIYLASVTKSGCVVVQDFEALYCSSSDLSTCPKEDESKHLIHLSIGQQLD 6
           GIS LEFD+KGIYL SVTKSGC+ V DFE LYC +S L  C KEDESKH++HLS+ +QLD
Sbjct: 88  GISALEFDTKGIYLVSVTKSGCLTVHDFETLYCHTSVLVPCLKEDESKHVLHLSLNRQLD 147

Query: 5   V 3
           V
Sbjct: 148 V 148


>ref|XP_003539058.1| PREDICTED: uncharacterized protein LOC100780441 [Glycine max]
          Length = 477

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/120 (60%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
 Frame = -2

Query: 362 LDGRFSLKYRREASALMLKSYTEVGAFPHFYHVGGARCPTHMNRVMNAA-GDQQVPLRRE 186
           L+GRF   YR E   L+++SY+EV AFPH Y V GA C +H NR++  A GD  +P R++
Sbjct: 33  LNGRFERNYRHEMLDLLIRSYSEVAAFPHLYQVDGAPCQSHTNRLIGEANGDGHLPFRKQ 92

Query: 185 GISGLEFDSKGIYLASVTKSGCVVVQDFEALYCSSSDLSTCPKEDESKHLIHLSIGQQLD 6
           GIS ++FD+KGIYL SVTKSGC+ V DFEALYC   +L TC KEDESKHL+HLS+ QQLD
Sbjct: 93  GISAVDFDNKGIYLVSVTKSGCLTVHDFEALYCQIPEL-TCLKEDESKHLMHLSLNQQLD 151


>emb|CBI16420.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/123 (51%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
 Frame = -2

Query: 362 LDGRFSLKYRREASALMLKSYTEVGAFPHFYHVGGARCPTHMNRVMNAAGDQ-QVP--LR 192
           L+GRF  +YR + S L+++SY+E+GAF H YH+ G +C TH+   +        +P  + 
Sbjct: 73  LNGRFESRYRHDISGLLMQSYSEIGAFAHLYHINGVQCQTHVCEFLKLFFPHISLPTFVA 132

Query: 191 REGISGLEFDSKGIYLASVTKSGCVVVQDFEALYCSSSDLSTCPKEDESKHLIHLSIGQQ 12
            +GIS LEFDSKGIYLASVTK GC+ V DFE+LYC + ++STC +E E++HL+HLS   Q
Sbjct: 133 LQGISALEFDSKGIYLASVTKLGCLTVHDFESLYCQTIEISTCLEEGETRHLLHLSTDHQ 192

Query: 11  LDV 3
           LDV
Sbjct: 193 LDV 195


>ref|XP_002283009.1| PREDICTED: uncharacterized protein LOC100243206 [Vitis vinifera]
          Length = 462

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/121 (50%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 LDGRFSLKYRREASALMLKSYTEVGAFPHFYHVGGARCPTHMNRVMNAAG-DQQVPLRRE 186
           L+GRF  +YR + S L+++SY+E                  MNR+ N    D QVP+R++
Sbjct: 30  LNGRFESRYRHDISGLLMQSYSE------------------MNRIANGMYMDLQVPIRKQ 71

Query: 185 GISGLEFDSKGIYLASVTKSGCVVVQDFEALYCSSSDLSTCPKEDESKHLIHLSIGQQLD 6
           GIS LEFDSKGIYLASVTK GC+ V DFE+LYC + ++STC +E E++HL+HLS   QLD
Sbjct: 72  GISALEFDSKGIYLASVTKLGCLTVHDFESLYCQTIEISTCLEEGETRHLLHLSTDHQLD 131

Query: 5   V 3
           V
Sbjct: 132 V 132


>ref|NP_001190298.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332004448|gb|AED91831.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 554

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 2/122 (1%)
 Frame = -2

Query: 362 LDGRFSLKYRREASALMLKSYTEVGAFPHFYHVGGARCPTHMNRVMNAAGDQQVPLRREG 183
           ++GR    YR E  + +  SY+E+G F HFYH+    C THM ++ +     Q P  R G
Sbjct: 81  VNGRLDSAYRHELYSRVAHSYSEIGKFSHFYHLNENPCITHMMQIQSL---YQCPTMR-G 136

Query: 182 ISGLEFDSKGIYLASVTKSGCVVVQDFEALYCSSSDLSTCPKEDESKHLIHLSI--GQQL 9
           ++GL+FD++GI+L SVT+SGC++V DFE+LYC S  L     EDESKH++H S   G++ 
Sbjct: 137 VAGLDFDNRGIFLVSVTRSGCLMVHDFESLYCQSK-LGPGSAEDESKHVVHFSYPPGREF 195

Query: 8   DV 3
           DV
Sbjct: 196 DV 197


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