BLASTX nr result

ID: Cimicifuga21_contig00029424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029424
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321224.1| predicted protein [Populus trichocarpa] gi|2...    68   4e-16
emb|CAB40994.1| auxilin-like protein [Arabidopsis thaliana] gi|7...    71   6e-16
ref|NP_193013.2| auxilin-related protein 2 [Arabidopsis thaliana...    71   6e-16
ref|NP_001190708.1| auxilin-related protein 2 [Arabidopsis thali...    71   6e-16
emb|CAB40995.1| auxilin-like protein [Arabidopsis thaliana] gi|7...    67   7e-15

>ref|XP_002321224.1| predicted protein [Populus trichocarpa] gi|222861997|gb|EEE99539.1|
           predicted protein [Populus trichocarpa]
          Length = 941

 Score = 68.2 bits (165), Expect(2) = 4e-16
 Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 9/98 (9%)
 Frame = +2

Query: 224 VFEDQKTRESGGLDYDDVFGAPPKYRNSSNGRSSTPLA-SFDSMFQEGVNDYSVKSSTLP 400
           +F+D    +  GL +++ F  P KY  S  G S+T  +  +DS+F+    D + KS++LP
Sbjct: 57  IFDDHVGTD--GLLFNNAFDGPLKYSESRGGASTTTSSFDYDSIFK----DQNSKSASLP 110

Query: 401 VYDKPVYDSEDMFDGLPGLRNSS--------SVKFENV 490
           V+DKPVYD +D+FDGLPGL+NSS        + KF+NV
Sbjct: 111 VFDKPVYD-DDIFDGLPGLKNSSTDGGSASAAPKFDNV 147



 Score = 41.2 bits (95), Expect(2) = 4e-16
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = +1

Query: 34  MDDFPDLLEKDFGFNPPKKSTPMASNRSKSS 126
           MDDFP LL +DFG+ P  KS PMA  R+ +S
Sbjct: 1   MDDFPGLLARDFGYKPQGKSAPMAPPRNTNS 31


>emb|CAB40994.1| auxilin-like protein [Arabidopsis thaliana]
           gi|7267978|emb|CAB78319.1| auxilin-like protein
           [Arabidopsis thaliana]
          Length = 909

 Score = 70.9 bits (172), Expect(2) = 6e-16
 Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
 Frame = +2

Query: 233 DQKTRESGGLDYDDVF-GAPPKYRNSSNGRS-STPLASFDSMFQEGVNDYSVKSSTLPVY 406
           D   R+   L + DVF G PPKY +S + RS S P   +D MF+E     S  +S++PVY
Sbjct: 58  DDLGRDGDDLLFRDVFSGPPPKYGSSGDSRSPSAPAFDYDVMFKE---PKSKSASSMPVY 114

Query: 407 DKPVYDSEDMFDGLPGLR----NSSSVKFENV 490
           DKPVYD ED+F+ +P L+    +S S +FENV
Sbjct: 115 DKPVYDDEDVFESIPELKIPSTSSQSARFENV 146



 Score = 37.7 bits (86), Expect(2) = 6e-16
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 34  MDDFPDLLEKDFGFNPPKKSTPMASNRSKSS 126
           MDDF  LL +DFG  P  KS PMAS  + S+
Sbjct: 1   MDDFTGLLARDFGLKPQGKSAPMASQSNSSA 31


>ref|NP_193013.2| auxilin-related protein 2 [Arabidopsis thaliana]
           gi|122230016|sp|Q0WQ57.1|AUXI2_ARATH RecName:
           Full=Auxilin-related protein 2
           gi|110737602|dbj|BAF00742.1| auxilin-like protein
           [Arabidopsis thaliana] gi|332657777|gb|AEE83177.1|
           auxilin-related protein 2 [Arabidopsis thaliana]
          Length = 891

 Score = 70.9 bits (172), Expect(2) = 6e-16
 Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
 Frame = +2

Query: 233 DQKTRESGGLDYDDVF-GAPPKYRNSSNGRS-STPLASFDSMFQEGVNDYSVKSSTLPVY 406
           D   R+   L + DVF G PPKY +S + RS S P   +D MF+E     S  +S++PVY
Sbjct: 58  DDLGRDGDDLLFRDVFSGPPPKYGSSGDSRSPSAPAFDYDVMFKE---PKSKSASSMPVY 114

Query: 407 DKPVYDSEDMFDGLPGLR----NSSSVKFENV 490
           DKPVYD ED+F+ +P L+    +S S +FENV
Sbjct: 115 DKPVYDDEDVFESIPELKIPSTSSQSARFENV 146



 Score = 37.7 bits (86), Expect(2) = 6e-16
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 34  MDDFPDLLEKDFGFNPPKKSTPMASNRSKSS 126
           MDDF  LL +DFG  P  KS PMAS  + S+
Sbjct: 1   MDDFTGLLARDFGLKPQGKSAPMASQSNSSA 31


>ref|NP_001190708.1| auxilin-related protein 2 [Arabidopsis thaliana]
           gi|332657778|gb|AEE83178.1| auxilin-related protein 2
           [Arabidopsis thaliana]
          Length = 889

 Score = 70.9 bits (172), Expect(2) = 6e-16
 Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
 Frame = +2

Query: 233 DQKTRESGGLDYDDVF-GAPPKYRNSSNGRS-STPLASFDSMFQEGVNDYSVKSSTLPVY 406
           D   R+   L + DVF G PPKY +S + RS S P   +D MF+E     S  +S++PVY
Sbjct: 58  DDLGRDGDDLLFRDVFSGPPPKYGSSGDSRSPSAPAFDYDVMFKE---PKSKSASSMPVY 114

Query: 407 DKPVYDSEDMFDGLPGLR----NSSSVKFENV 490
           DKPVYD ED+F+ +P L+    +S S +FENV
Sbjct: 115 DKPVYDDEDVFESIPELKIPSTSSQSARFENV 146



 Score = 37.7 bits (86), Expect(2) = 6e-16
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 34  MDDFPDLLEKDFGFNPPKKSTPMASNRSKSS 126
           MDDF  LL +DFG  P  KS PMAS  + S+
Sbjct: 1   MDDFTGLLARDFGLKPQGKSAPMASQSNSSA 31


>emb|CAB40995.1| auxilin-like protein [Arabidopsis thaliana]
           gi|7267979|emb|CAB78320.1| auxilin-like protein
           [Arabidopsis thaliana]
          Length = 924

 Score = 67.4 bits (163), Expect(2) = 7e-15
 Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
 Frame = +2

Query: 233 DQKTRESGGLDYDDVFGAPP--KYRNSS-NGRS-STPLASFDSMFQEGVNDYSVKSSTLP 400
           D   R+   L + DVF  PP  KY +SS + RS S P   +D+MF+E     S  +S++P
Sbjct: 58  DDPGRDGDDLLFKDVFSGPPPPKYGSSSGDSRSPSAPAFDYDAMFKE---PKSKSASSMP 114

Query: 401 VYDKPVYDSEDMFDGLPGLR----NSSSVKFENV 490
           VYDKPVYD ED+F+ +P L+    +S S +FENV
Sbjct: 115 VYDKPVYDDEDVFESIPELKIPSTSSQSARFENV 148



 Score = 37.7 bits (86), Expect(2) = 7e-15
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 34  MDDFPDLLEKDFGFNPPKKSTPMASNRSKSS 126
           MDDF  LL +DFG  P  KS PMAS  + S+
Sbjct: 1   MDDFTGLLARDFGLKPQGKSAPMASQSNSSA 31


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