BLASTX nr result

ID: Cimicifuga21_contig00029408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029408
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307616.1| predicted protein [Populus trichocarpa] gi|2...   160   3e-37
ref|XP_002300812.1| predicted protein [Populus trichocarpa] gi|2...   152   7e-35
ref|XP_002520966.1| RNA binding protein, putative [Ricinus commu...   144   2e-32
ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795...   108   1e-21
ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809...   107   4e-21

>ref|XP_002307616.1| predicted protein [Populus trichocarpa] gi|222857065|gb|EEE94612.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  160 bits (405), Expect = 3e-37
 Identities = 79/149 (53%), Positives = 103/149 (69%), Gaps = 1/149 (0%)
 Frame = -3

Query: 656 MKFKNGNSVEVLRRK-EPCEHWFPGTIVSADRFKCTVRYDLFLSCEGVPVVEEVCYQNVR 480
           MKFK GN VEVLRR  EPC  WFPG++VSA    C +RY      +G PV+E+V  ++VR
Sbjct: 1   MKFKEGNLVEVLRRDHEPCGSWFPGSVVSARGNYCKIRYKSVSDNKGEPVMEKVREEDVR 60

Query: 479 PYPPPIRGGERWVAGDTAEVFDLHCWRVGKVVKVLNNNRFVIRLSGTIQLKEFQRSDLRV 300
           P PP  +  +RW+ GD AE+FD  CWR GK+ KVLNNN FV+RL G+IQLKEF  S +R+
Sbjct: 61  PQPPH-KKRKRWMVGDVAEIFDFQCWREGKIAKVLNNNLFVVRLFGSIQLKEFHESSIRI 119

Query: 299 RQAWRNNEWVMIEKVGEQIINNVKQSTSK 213
           +QAW NN W +I KV + I ++ K + +K
Sbjct: 120 QQAWHNNNWSVIGKVTQNIEHSKKCAENK 148


>ref|XP_002300812.1| predicted protein [Populus trichocarpa] gi|222842538|gb|EEE80085.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  152 bits (384), Expect = 7e-35
 Identities = 75/153 (49%), Positives = 103/153 (67%), Gaps = 3/153 (1%)
 Frame = -3

Query: 656 MKFKNGNSVEVLRRK-EPCEHWFPGTIVSADRFKCTVRYDLFLSCEGVPVVEEVCYQNVR 480
           MKFK GN VEVLRR+ E C  WFP ++VSA    C +RY+      G PV+E+V  ++VR
Sbjct: 1   MKFKKGNLVEVLRREHESCGSWFPASVVSARGNYCKIRYESHSDNNGEPVMEKVHKEDVR 60

Query: 479 PYPPPIRGGERWVAGDTAEVFDLHCWRVGKVVKVLNNNRFVIRLSGTIQLKEFQRSDLRV 300
           P PP  +  +RW+ GD AE+FD  CWR GK+ KVL NN FV+RL G+IQLKEF  S++R+
Sbjct: 61  PQPPH-KKRKRWIVGDVAEIFDFQCWREGKIAKVLKNNLFVVRLFGSIQLKEFHESNIRI 119

Query: 299 RQAWRNNEWVMIEKV--GEQIINNVKQSTSKYA 207
           +QAWR+N W +I KV   ++   N  ++  K++
Sbjct: 120 QQAWRSNNWSVIGKVAHNKEYTKNCTENKPKHS 152


>ref|XP_002520966.1| RNA binding protein, putative [Ricinus communis]
           gi|223539803|gb|EEF41383.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score =  144 bits (364), Expect = 2e-32
 Identities = 75/138 (54%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
 Frame = -3

Query: 656 MKFKNGNSVEVLRR-KEPCEHWFPGTIVSADRFKCTVRYDLFLSCEGVPVVEEVCYQNVR 480
           M F+ GNSVEV +R  EPC  WFPG ++S D     VRY L    EG PV+E+V  ++VR
Sbjct: 1   MGFEEGNSVEVFKRVHEPCGSWFPGYLISVDGDCYIVRYYLLADPEGEPVIEKVHKEDVR 60

Query: 479 PYPPPIRGGERWVAGDTAEVFDLHCWRVGKVVKVL-NNNRFVIRLSGTIQLKEFQRSDLR 303
           P PP  R  +RW+ GD AEVFD+  WR GK+VKVL NN+ FVIRL G+IQLKEF  S LR
Sbjct: 61  PQPPSKRK-KRWMVGDVAEVFDIQRWRFGKIVKVLKNNDLFVIRLFGSIQLKEFHESKLR 119

Query: 302 VRQAWRNNEWVMIEKVGE 249
           + Q W  N+W ++EKV +
Sbjct: 120 IHQTWNKNKWSVMEKVAQ 137


>ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795963 [Glycine max]
          Length = 404

 Score =  108 bits (270), Expect = 1e-21
 Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
 Frame = -3

Query: 656 MKFKNGNSVEVLRRKE-PCEHWFPGTIVSADRFKCTVRYDLFLSCEGVPVVEEVCYQNVR 480
           MKFK GN VEVL + E PC  W    I+ ++    TV+YD + S  G  +VE V  +++R
Sbjct: 1   MKFKKGNKVEVLSKVEVPCGSWLCAEIICSNGHHYTVKYDGYESDAGEAIVERVSRKDLR 60

Query: 479 PYPPPIRGGERWVAGDTAEVFDLHCWRVGKVVKVLNNNRFVIRLSGTIQLKEFQRSDLRV 300
           P PP +   + W  GD  E+F    W++  V+K+L  N  ++RL G+    +  + D+RV
Sbjct: 61  PCPPALELTDNWSPGDVVEIFQNFSWKMATVLKILGKNHILVRLLGSSLEFQVSKFDIRV 120

Query: 299 RQAWRNNEWVMIEKVGEQIINNVKQST 219
           RQ+W++++W+++ K      N  + ST
Sbjct: 121 RQSWQDDKWIIVGKGSSSCENRKRSST 147


>ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max]
          Length = 397

 Score =  107 bits (266), Expect = 4e-21
 Identities = 53/149 (35%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
 Frame = -3

Query: 656 MKFKNGNSVEVLRRKE-PCEHWFPGTIVSADRFKCTVRYDLFLSCEGVPVVEEVCYQNVR 480
           M+FK GN VEVL + E PC  W    I+  +    TV+YD + S  G  +VE+V  +++R
Sbjct: 1   MRFKKGNKVEVLSKVEVPCGSWLYAEIICGNGHHYTVKYDGYESDAGEAIVEQVSRKDIR 60

Query: 479 PYPPPIRGGERWVAGDTAEVFDLHCWRVGKVVKVLNNNRFVIRLSGTIQLKEFQRSDLRV 300
           P PP +   + W +GD  EVF    W++  V+KV   N  ++RL G+    +  + D+RV
Sbjct: 61  PCPPALELTDNWNSGDVVEVFQNFSWKMATVLKVFGKNHILVRLLGSSLEFQVSKFDIRV 120

Query: 299 RQAWRNNEWVMIEKVGEQIINNVKQSTSK 213
           RQ+W++++W+++ K G     N K+S+++
Sbjct: 121 RQSWQDDKWIIVGK-GSSSHENRKRSSAQ 148


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