BLASTX nr result

ID: Cimicifuga21_contig00029395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029395
         (1372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|2...   104   5e-20
ref|XP_002324808.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-18
emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]    92   4e-16
emb|CAX46395.1| putative EMF1 protein [Rosa lucieae]                   91   9e-16

>ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|222855527|gb|EEE93074.1|
            predicted protein [Populus trichocarpa]
          Length = 1309

 Score =  104 bits (260), Expect = 5e-20
 Identities = 105/335 (31%), Positives = 143/335 (42%), Gaps = 10/335 (2%)
 Frame = -2

Query: 1368 NMNGDNSVKCMDPF---LEKRKSILDLETTKRIHPEYPFAFRDRGIQXXXXXXXXXXXXX 1198
            NMNGD  +K ++     L K+      ET  R   EYPFA +  GI+             
Sbjct: 983  NMNGDRELKFLNKNAANLGKQNRNFGSETLIRARSEYPFAGKHNGIELNQKPIGSL---- 1038

Query: 1197 MDLYNNEKIPATQLLRLMDAGMCPSAPINVDENEDENFTPQPSLSRVHHQWGEMSRF--G 1024
             DLY+NE IPA  LL LMDAG+  SAPIN+D N    F  +PS++  + +  E SR   G
Sbjct: 1039 -DLYSNETIPAMHLLSLMDAGVQSSAPINMDVN--SKFLKRPSITH-NPEPKEFSRLDTG 1094

Query: 1023 HLKNNEAVVLPPPSKCLDRNHLSGKFGETFPSAAAEANPVGSSAPSVPEVYKAGXXXXXX 844
              K    V  PPP+    +N L+  F +  P     A   G+S+ S+             
Sbjct: 1095 AFKAVNTVKHPPPNH-HGKNQLAENFRDHIPVIQTTA---GASSSSI------------- 1137

Query: 843  XXXXXXXXXSLQKSDIAKRALGPRGSNQAKLTPKSPRDQIKGKAKTKEAPTQPESSRSKK 664
                                L  +G  +A   P     Q K K K  ++ TQ + +RS+K
Sbjct: 1138 --------------------LHDKGIRKATDFPIQV-VQDKDKRKGSDSRTQNKVNRSQK 1176

Query: 663  TVSGN-----GTSGKNRELAPIRQPPQKESMPSPILAVAVKDPIKRGEPKLNKAGTVGLG 499
            +  G      G+   +               P P  A+   +  K   P  N+  TV   
Sbjct: 1177 SAYGGFGTNCGSIPAHNMQTMFYGASDSSMFPLPFRALEKPNKHKLESPANNR--TVHAH 1234

Query: 498  KRSRRTEFCYMSRNPAEFTLPELGNEYMISYEDLK 394
            K S  TE C ++RNPA+FT+PE GN YMI  EDLK
Sbjct: 1235 KSSSETEVCSVNRNPADFTVPEAGNMYMIVGEDLK 1269


>ref|XP_002324808.1| predicted protein [Populus trichocarpa] gi|222866242|gb|EEF03373.1|
            predicted protein [Populus trichocarpa]
          Length = 540

 Score = 97.8 bits (242), Expect = 6e-18
 Identities = 104/341 (30%), Positives = 142/341 (41%), Gaps = 16/341 (4%)
 Frame = -2

Query: 1368 NMNGDNSVKCMDPF---LEKRKSILDLETTKRIHPEYPFAFRDRGIQXXXXXXXXXXXXX 1198
            NMNGD  +K  +     L K+   L  ET  R H EYPFA +  GI+             
Sbjct: 217  NMNGDRVLKFPNKNAANLGKQNRNLGSETLLRAHAEYPFAGKHNGIELNHKPMGSL---- 272

Query: 1197 MDLYNNEKIPATQLLRLMDAGMCPSAPINVDENEDENFTPQPSLSRVHHQWGEMSRFGHL 1018
             +LY+NE IPA  LL LMDAG+  SAPIN+D N    F  +P++  +H+   E   F  L
Sbjct: 273  -ELYSNETIPAMHLLSLMDAGVQSSAPINMDVN--PKFLKRPAI--IHN--AEPKEFSRL 325

Query: 1017 KNNEAVVLP----PPSKCLDRNHLSGKFGETFPSAAAEANPVGSSAPSVPEVYKAGXXXX 850
                  V+     PP     +N L+    +  P     A   G+S+ S+           
Sbjct: 326  DTGAYKVISSVKHPPRNHNGKNQLAESSRDLIPIMQTTA---GASSLSIRH--------- 373

Query: 849  XXXXXXXXXXXSLQKSDIAKRALGPRGSNQAKLTPKSPRDQIKGKAKTKEAPTQPESSRS 670
                               KR   P       +   SP  Q K + K  ++ TQ +++RS
Sbjct: 374  ------------------DKRIRKP-------VDLPSPVIQYKERRKGSDSRTQNKANRS 408

Query: 669  KKTVSGNGTSGKNRELAPIRQ---------PPQKESMPSPILAVAVKDPIKRGEPKLNKA 517
            +   S NG  G N    P             P   S+P   L    KD +K     L+  
Sbjct: 409  Q--TSANGGFGTNCGSIPAHSMRIMSFGAPDPSVFSLPFRALENPNKDKLK----SLDNN 462

Query: 516  GTVGLGKRSRRTEFCYMSRNPAEFTLPELGNEYMISYEDLK 394
              V   K S  TE C ++RNPA+FT+PE GN YMI+ E L+
Sbjct: 463  RIVHPHKSSSETEVCSVNRNPADFTIPEAGNMYMIAGEALR 503


>emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]
          Length = 1388

 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 102/337 (30%), Positives = 139/337 (41%), Gaps = 13/337 (3%)
 Frame = -2

Query: 1365 MNGDNSVKCMDPF---LEKRKSILDLETTKRIHPEYPFAFRDRGIQXXXXXXXXXXXXXM 1195
            M G+  +K ++     LEK+   +  ET  R H EYPFA +D GI+              
Sbjct: 1059 MTGEQDLKFLNSNAFDLEKQNRSIGSETLNRAHVEYPFACKDNGIKLHPKLVGSL----- 1113

Query: 1194 DLYNNEKIPATQLLRLMDAGMCPSAPINVDENEDENFTPQPSLSRVHHQWGEMS--RFGH 1021
            DLY+NE IPA  LL LMD+GM    P ++D   D  F  + +  R  +   E S    G 
Sbjct: 1114 DLYSNENIPAMHLLSLMDSGMQSRTPFSMD--GDSKFLKKSAFPR-DYDSREFSGLEIGA 1170

Query: 1020 LKNNEAVVLPPPSKCLDRNHLSGKFGETFPSAAAEANPVGSSAPSVPEVYKAGXXXXXXX 841
             K   +   P    C  +NHL+    E   + +     VG+ A S               
Sbjct: 1171 YKARNSSRQPSSDHC-GKNHLA----ERSCACSLAVTSVGAFASS--------------- 1210

Query: 840  XXXXXXXXSLQKSDIAKRALGPRGSNQAKLTPKSPRDQIKGKAKTKEAPTQPESSRSKKT 661
                      QK    K    P G     L    PR + K K+K    P Q     S+K+
Sbjct: 1211 ---------SQKDGNFK----PAGLIDQVL----PRSRGKEKSKVLPPPIQNRGCTSRKS 1253

Query: 660  VSGNGT-SGKNRELAPI-----RQPPQKESMPSPILAVAVKDPIK--RGEPKLNKAGTVG 505
             S  G  SG N E  PI     R P    SM  P+    +++ I+    E   N      
Sbjct: 1254 SSTCGDYSGTNHESIPIHDTQKRFPGASNSMRFPLQPHTIENSIECIALETHCNGGTFWP 1313

Query: 504  LGKRSRRTEFCYMSRNPAEFTLPELGNEYMISYEDLK 394
            +  RS  TE C +++NPA+F++P  GN YMI  EDLK
Sbjct: 1314 INSRS-ETEICSINKNPADFSVPVAGNIYMIGAEDLK 1349


>emb|CAX46395.1| putative EMF1 protein [Rosa lucieae]
          Length = 483

 Score = 90.5 bits (223), Expect = 9e-16
 Identities = 87/320 (27%), Positives = 125/320 (39%), Gaps = 8/320 (2%)
 Frame = -2

Query: 1371 GNMNGDN--SVKCMDPFLEKRKSILDLETTKRIHPEYPFAFRDRGIQXXXXXXXXXXXXX 1198
            GN  GD   S+    P  EKR   +  ET  R +PEY F  +  G +             
Sbjct: 209  GNATGDCDLSLNLNAPNFEKRNEAVGSETISRTNPEYSFTCKRNGTEPHQNSLGSL---- 264

Query: 1197 MDLYNNEKIPATQLLRLMDAGMCPSAPINVDENEDENFTPQPSLSRVHHQWGEMSRFGHL 1018
             DLY+NE IPA  LL LMDAGM   A +N+  N    F  +P  + ++ +       G  
Sbjct: 265  -DLYSNETIPAMHLLSLMDAGMRSGASLNMGGN--PKFPKRPFPNDLNSKGYPGLDIGLY 321

Query: 1017 KNNEAVVLPPPSKCLDRNHLSGKFGETFPSAAAEANPV-GSSAPSVPEVYKAGXXXXXXX 841
            K  +  V  P S C  +NHLS K  + FP+     NP  G+S+ S       G       
Sbjct: 322  KAAD-TVNHPSSNCYGKNHLSEKSLDLFPT-----NPTFGASSSSFEHSKSFG------- 368

Query: 840  XXXXXXXXSLQKSDIAKRALGPRGSNQAKLTPKSPRDQIKGKAKTKEAPTQPESSRSKKT 661
                                            +    Q K K +   +P Q    RS+K+
Sbjct: 369  -------------------------RATDFMDQVSSSQKKEKIQRSHSPAQNRGPRSQKS 403

Query: 660  VSGNGTSGKNRELAPIRQPPQ-----KESMPSPILAVAVKDPIKRGEPKLNKAGTVGLGK 496
            ++ +G  G NR   P+   P+        +  P+    + +  K      N  GT+   K
Sbjct: 404  LAADGGFGNNRTTIPVHSIPKGFLPVSGPLMFPLHYHTIANSRKHNLETPNANGTMKPPK 463

Query: 495  RSRRTEFCYMSRNPAEFTLP 436
             S  +  C M+RNPA+FT+P
Sbjct: 464  TSSESSICCMNRNPADFTIP 483


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