BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029385
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   265   1e-68
emb|CBI24510.3| unnamed protein product [Vitis vinifera]              262   6e-68
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   262   6e-68
ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation spec...   241   2e-61
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec...   241   2e-61

>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
           [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
           and polyadenylation specificity factor cpsf, putative
           [Ricinus communis]
          Length = 1461

 Score =  265 bits (676), Expect = 1e-68
 Identities = 128/173 (73%), Positives = 147/173 (84%)
 Frame = -3

Query: 534 MSYAAFKMMHWPTGIENCSSGFITHCVADFVPQIPSIPSDDLDSEWPITKKEIGPIPNLI 355
           MSYAA+KM+HWPTGIE+C+SG+ITH  ADFVPQIP I +D+LDSEWP +K+ IGP+PNLI
Sbjct: 1   MSYAAYKMLHWPTGIESCASGYITHSRADFVPQIPPIQTDNLDSEWPPSKRGIGPMPNLI 60

Query: 354 VTAGNVLEVYMVRVQEDGGNRGFKPPPEAKRGGSMGGISSAWLELVCHYKLHGNVETMAV 175
           VTAG+VLEVY+VRVQEDG +R  +   E KRGG M G+S A LELVCHY+LHGNVE+M V
Sbjct: 61  VTAGSVLEVYVVRVQEDG-SRESRSSRETKRGGLMDGVSGASLELVCHYRLHGNVESMVV 119

Query: 174 LSRGGSDGCKRRDSIVLAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLDRK 16
           L   G D  +RRDSI+LAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWL  K
Sbjct: 120 LPTEGGDSSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLK 172


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  262 bits (669), Expect = 6e-68
 Identities = 128/173 (73%), Positives = 143/173 (82%)
 Frame = -3

Query: 534 MSYAAFKMMHWPTGIENCSSGFITHCVADFVPQIPSIPSDDLDSEWPITKKEIGPIPNLI 355
           MSYAA+KMMHWPTGIENC+SGF+TH  ADF PQI  I +DDL+SEWP TK++IGP+PNLI
Sbjct: 1   MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQTDDLESEWP-TKRQIGPLPNLI 59

Query: 354 VTAGNVLEVYMVRVQEDGGNRGFKPPPEAKRGGSMGGISSAWLELVCHYKLHGNVETMAV 175
           VTA N+LEVYMVRVQED  +R  +   E KRGG M GIS A LELVC Y+LHGNVETM V
Sbjct: 60  VTAANILEVYMVRVQEDD-SRESRASAETKRGGVMAGISGAALELVCQYRLHGNVETMTV 118

Query: 174 LSRGGSDGCKRRDSIVLAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLDRK 16
           L  GG D  +RRDSI+LAF+DAKISVLEFDDSIHGLRTSSMHCFEGPEW   K
Sbjct: 119 LPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLK 171


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Vitis vinifera]
          Length = 1442

 Score =  262 bits (669), Expect = 6e-68
 Identities = 128/173 (73%), Positives = 143/173 (82%)
 Frame = -3

Query: 534 MSYAAFKMMHWPTGIENCSSGFITHCVADFVPQIPSIPSDDLDSEWPITKKEIGPIPNLI 355
           MSYAA+KMMHWPTGIENC+SGF+TH  ADF PQI  I +DDL+SEWP TK++IGP+PNLI
Sbjct: 1   MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQTDDLESEWP-TKRQIGPLPNLI 59

Query: 354 VTAGNVLEVYMVRVQEDGGNRGFKPPPEAKRGGSMGGISSAWLELVCHYKLHGNVETMAV 175
           VTA N+LEVYMVRVQED  +R  +   E KRGG M GIS A LELVC Y+LHGNVETM V
Sbjct: 60  VTAANILEVYMVRVQEDD-SRESRASAETKRGGVMAGISGAALELVCQYRLHGNVETMTV 118

Query: 174 LSRGGSDGCKRRDSIVLAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLDRK 16
           L  GG D  +RRDSI+LAF+DAKISVLEFDDSIHGLRTSSMHCFEGPEW   K
Sbjct: 119 LPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLK 171


>ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cucumis sativus]
          Length = 643

 Score =  241 bits (614), Expect = 2e-61
 Identities = 118/173 (68%), Positives = 141/173 (81%)
 Frame = -3

Query: 534 MSYAAFKMMHWPTGIENCSSGFITHCVADFVPQIPSIPSDDLDSEWPITKKEIGPIPNLI 355
           MS+AA++MMHWPTGIENC S +ITH  ADFVP + S  SDDLDS+W   +++IGP+PNL+
Sbjct: 1   MSFAAYRMMHWPTGIENCDSAYITHSRADFVPAVTS-HSDDLDSDWH-PRRDIGPVPNLV 58

Query: 354 VTAGNVLEVYMVRVQEDGGNRGFKPPPEAKRGGSMGGISSAWLELVCHYKLHGNVETMAV 175
           VTAGNVLEVY+VRV E+GG R  K   E KRGG M G+S A LELVCHY+LHGNVE+MA+
Sbjct: 59  VTAGNVLEVYVVRVLEEGG-RESKSSGEVKRGGIMDGVSWASLELVCHYRLHGNVESMAI 117

Query: 174 LSRGGSDGCKRRDSIVLAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLDRK 16
           LS  G DG K+RDSI+L F++AKISVLEFDDS H LRTSSMHCF+GP+WL  K
Sbjct: 118 LSSRGGDGSKKRDSIILVFQEAKISVLEFDDSTHSLRTSSMHCFDGPQWLHLK 170


>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cucumis sativus]
          Length = 1504

 Score =  241 bits (614), Expect = 2e-61
 Identities = 117/173 (67%), Positives = 141/173 (81%)
 Frame = -3

Query: 534 MSYAAFKMMHWPTGIENCSSGFITHCVADFVPQIPSIPSDDLDSEWPITKKEIGPIPNLI 355
           MS+AA++MMHWPTGIENC S +ITH  ADFVP + S  SDDLDS+W   +++IGP+PNL+
Sbjct: 1   MSFAAYRMMHWPTGIENCDSAYITHSRADFVPAVTS-HSDDLDSDWH-PRRDIGPVPNLV 58

Query: 354 VTAGNVLEVYMVRVQEDGGNRGFKPPPEAKRGGSMGGISSAWLELVCHYKLHGNVETMAV 175
           VTAGNVLEVY+VRV E+GG R  K   E +RGG M G+S A LELVCHY+LHGNVE+MA+
Sbjct: 59  VTAGNVLEVYVVRVLEEGG-RESKSSGEVRRGGIMDGVSGASLELVCHYRLHGNVESMAI 117

Query: 174 LSRGGSDGCKRRDSIVLAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLDRK 16
           LS  G DG K+RDSI+L F++AKISVLEFDDS H LRTSSMHCF+GP+WL  K
Sbjct: 118 LSSRGGDGSKKRDSIILVFQEAKISVLEFDDSTHSLRTSSMHCFDGPQWLHLK 170