BLASTX nr result

ID: Cimicifuga21_contig00029373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029373
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256...   144   1e-32
emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]   144   1e-32
ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_003601396.1| Membrane protein, putative [Medicago truncat...   126   2e-27
gb|AFK44808.1| unknown [Lotus japonicus]                              120   9e-26

>ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256852 [Vitis vinifera]
           gi|297739206|emb|CBI28857.3| unnamed protein product
           [Vitis vinifera]
          Length = 390

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/111 (64%), Positives = 84/111 (75%)
 Frame = -3

Query: 417 ITVFSFSILVCPAAAIWTYGFQDFVLPDLYSFLLMVVLGVLSFFAEVFLARALQLEKTSR 238
           ITVF+F +L  PAAAI T+ FQDFVLP  YSF LMV+L VL+FFAEVFLAR LQLEKTS+
Sbjct: 279 ITVFAFGMLGSPAAAICTFAFQDFVLPSFYSFFLMVILAVLAFFAEVFLARGLQLEKTSK 338

Query: 237 VANIQYIEVVLLQMWNVSLSRAALSFGKLAGCLLILASVSGTMHFGHEKEM 85
             NIQYIE  L Q+W +  S+ A SFG+L GC LI AS   TM+FG +KEM
Sbjct: 339 ATNIQYIEAALSQLWGLGSSKIAPSFGRLVGCFLIFASTCCTMYFGPDKEM 389


>emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]
          Length = 413

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/111 (64%), Positives = 84/111 (75%)
 Frame = -3

Query: 417 ITVFSFSILVCPAAAIWTYGFQDFVLPDLYSFLLMVVLGVLSFFAEVFLARALQLEKTSR 238
           ITVF+F +L  PAAAI T+ FQDFVLP  YSF LMV+L VL+FFAEVFLAR LQLEKTS+
Sbjct: 302 ITVFAFGMLGSPAAAICTFAFQDFVLPSFYSFFLMVILAVLAFFAEVFLARGLQLEKTSK 361

Query: 237 VANIQYIEVVLLQMWNVSLSRAALSFGKLAGCLLILASVSGTMHFGHEKEM 85
             NIQYIE  L Q+W +  S+ A SFG+L GC LI AS   TM+FG +KEM
Sbjct: 362 ATNIQYIEAALSQLWGLGSSKIAPSFGRLVGCFLIFASTCCTMYFGPDKEM 412


>ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|222861253|gb|EEE98795.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/110 (57%), Positives = 79/110 (71%)
 Frame = -3

Query: 414 TVFSFSILVCPAAAIWTYGFQDFVLPDLYSFLLMVVLGVLSFFAEVFLARALQLEKTSRV 235
           TVFSF IL  PA  +  + F++FVLP+ Y+F LM++LG+LSF AEVF AR LQLEKTS+ 
Sbjct: 283 TVFSFGILATPATGMCAFAFEEFVLPNFYTFFLMLILGLLSFSAEVFFARGLQLEKTSKA 342

Query: 234 ANIQYIEVVLLQMWNVSLSRAALSFGKLAGCLLILASVSGTMHFGHEKEM 85
           AN+ Y+EV L Q+W +   R   SFG L GCLLIL SV  T++ G EKEM
Sbjct: 343 ANVLYMEVALSQLWGIGSWRITPSFGGLVGCLLILISVCCTIYIGPEKEM 392


>ref|XP_003601396.1| Membrane protein, putative [Medicago truncatula]
           gi|355490444|gb|AES71647.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 475

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/111 (57%), Positives = 81/111 (72%)
 Frame = -3

Query: 417 ITVFSFSILVCPAAAIWTYGFQDFVLPDLYSFLLMVVLGVLSFFAEVFLARALQLEKTSR 238
           +TVFSF IL  PA  I TY F+DFVLP + S LLMVVLG+L+FFAEV LAR LQLE+  +
Sbjct: 364 LTVFSFGILASPAMGICTYAFEDFVLPTVQSILLMVVLGILAFFAEVLLARGLQLERMGK 423

Query: 237 VANIQYIEVVLLQMWNVSLSRAALSFGKLAGCLLILASVSGTMHFGHEKEM 85
           VANIQY+E  L Q W+++L+  + +F  L G LLI+ SV  TM+ G +KEM
Sbjct: 424 VANIQYMEAALTQFWSLTLTLVSPAFDHLVGILLIVVSVCCTMYIGPDKEM 474


>gb|AFK44808.1| unknown [Lotus japonicus]
          Length = 203

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/111 (55%), Positives = 78/111 (70%)
 Frame = -3

Query: 417 ITVFSFSILVCPAAAIWTYGFQDFVLPDLYSFLLMVVLGVLSFFAEVFLARALQLEKTSR 238
           +TVFSF +   PA  I TY F+DFVLP     +LM+VLG+L+FFAEV LAR LQLEKT +
Sbjct: 92  LTVFSFGVPASPAMGICTYIFEDFVLPGFQPTVLMLVLGILAFFAEVLLARGLQLEKTGK 151

Query: 237 VANIQYIEVVLLQMWNVSLSRAALSFGKLAGCLLILASVSGTMHFGHEKEM 85
           VANI YIE  L Q W+++ +R A SF  L G LLI+ SV  T++ G +KEM
Sbjct: 152 VANILYIEAALTQFWSLAFTRVAPSFDHLVGILLIVISVGFTLYIGPDKEM 202


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