BLASTX nr result

ID: Cimicifuga21_contig00029337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029337
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004769610.1| photosystem II protein D1 (chloroplast) [Spi...   419   e-115
ref|YP_002836070.1| photosystem II protein D1 [Megaleranthis san...   419   e-115
ref|YP_003934346.1| photosystem II protein D1 [Monsonia speciosa...   419   e-115
ref|YP_001004166.1| photosystem II protein D1 [Ranunculus macran...   419   e-115
ref|YP_007475941.1| photosystem II protein D1 [Bismarckia nobili...   419   e-115

>ref|YP_004769610.1| photosystem II protein D1 (chloroplast) [Spirodela polyrhiza]
           gi|341834051|gb|AEK94322.1| photosystem II protein D1
           [Spirodela polyrhiza]
          Length = 353

 Score =  419 bits (1077), Expect = e-115
 Identities = 204/218 (93%), Positives = 204/218 (93%)
 Frame = +2

Query: 2   WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 181
           WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY
Sbjct: 14  WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 73

Query: 182 GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 361
           GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL
Sbjct: 74  GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 133

Query: 362 SFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 541
           SFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL
Sbjct: 134 SFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 193

Query: 542 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE 655
           MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE
Sbjct: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE 231


>ref|YP_002836070.1| photosystem II protein D1 [Megaleranthis saniculifolia]
           gi|226933862|gb|ACO91995.1| photosystem II protein D1
           [Megaleranthis saniculifolia]
          Length = 353

 Score =  419 bits (1077), Expect = e-115
 Identities = 204/218 (93%), Positives = 204/218 (93%)
 Frame = +2

Query: 2   WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 181
           WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY
Sbjct: 14  WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 73

Query: 182 GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 361
           GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL
Sbjct: 74  GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 133

Query: 362 SFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 541
           SFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL
Sbjct: 134 SFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 193

Query: 542 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE 655
           MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE
Sbjct: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE 231


>ref|YP_003934346.1| photosystem II protein D1 [Monsonia speciosa]
           gi|197132092|gb|ACH47564.1| photosystem II protein D1
           [Monsonia speciosa] gi|300069361|gb|ADJ66481.1|
           photosystem II protein D1 [Monsonia speciosa]
          Length = 353

 Score =  419 bits (1077), Expect = e-115
 Identities = 204/218 (93%), Positives = 204/218 (93%)
 Frame = +2

Query: 2   WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 181
           WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY
Sbjct: 14  WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 73

Query: 182 GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 361
           GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL
Sbjct: 74  GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 133

Query: 362 SFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 541
           SFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL
Sbjct: 134 SFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 193

Query: 542 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE 655
           MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE
Sbjct: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE 231


>ref|YP_001004166.1| photosystem II protein D1 [Ranunculus macranthus]
           gi|69217628|gb|AAZ04090.1| photosystem II protein D1
           [Ranunculus macranthus] gi|85540784|gb|ABC70736.1|
           photosystem II protein D1 [Ranunculus macranthus]
          Length = 353

 Score =  419 bits (1077), Expect = e-115
 Identities = 204/218 (93%), Positives = 204/218 (93%)
 Frame = +2

Query: 2   WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 181
           WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY
Sbjct: 14  WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 73

Query: 182 GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 361
           GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL
Sbjct: 74  GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 133

Query: 362 SFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 541
           SFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL
Sbjct: 134 SFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 193

Query: 542 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE 655
           MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE
Sbjct: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE 231


>ref|YP_007475941.1| photosystem II protein D1 [Bismarckia nobilis]
           gi|449326424|gb|AGE93006.1| photosystem II protein D1
           [Bismarckia nobilis]
          Length = 353

 Score =  419 bits (1076), Expect = e-115
 Identities = 203/218 (93%), Positives = 204/218 (93%)
 Frame = +2

Query: 2   WGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 181
           WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY
Sbjct: 14  WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 73

Query: 182 GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 361
           GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL
Sbjct: 74  GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 133

Query: 362 SFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 541
           SFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL
Sbjct: 134 SFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 193

Query: 542 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE 655
           MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE
Sbjct: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE 231


Top