BLASTX nr result

ID: Cimicifuga21_contig00029332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029332
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18190.3| unnamed protein product [Vitis vinifera]              125   4e-27
emb|CAN81434.1| hypothetical protein VITISV_010699 [Vitis vinifera]   125   4e-27
ref|XP_002327231.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_002526845.1| conserved hypothetical protein [Ricinus comm...   112   4e-23
gb|AED89990.1| PSL3c [Solanum chacoense x Solanum tuberosum]          106   2e-21

>emb|CBI18190.3| unnamed protein product [Vitis vinifera]
          Length = 869

 Score =  125 bits (314), Expect = 4e-27
 Identities = 71/137 (51%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   RMPFLSLVENSNSDRKSEVSVPVTRTTSS----CNQTMETTHPFSPKQLFREATRRWYMV 171
           R+PF SL+EN+    KSEVS+   +T SS    C  T       S      E  RRW MV
Sbjct: 569 RVPFHSLLENAACKSKSEVSILGAKTRSSNSVNCTGTTGNATNSSFNNSAGEGKRRWNMV 628

Query: 172 VDTNSLLNKESRRSXXXXXXXXXXXXIIPRMVLRELDYLKKRGSLTRKATEISAVLQWIE 351
           VD   LLNKESR+S            IIPRMV+RELD LK+RGSL R+ +E+S VLQWIE
Sbjct: 629 VDATCLLNKESRKSLQLLQGLKGTQLIIPRMVIRELDCLKRRGSLFRRISEVSLVLQWIE 688

Query: 352 ECMVETK*WLHVQNSME 402
           ECMV+TK W+HVQ+S+E
Sbjct: 689 ECMVKTKWWIHVQSSIE 705


>emb|CAN81434.1| hypothetical protein VITISV_010699 [Vitis vinifera]
          Length = 828

 Score =  125 bits (314), Expect = 4e-27
 Identities = 71/137 (51%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   RMPFLSLVENSNSDRKSEVSVPVTRTTSS----CNQTMETTHPFSPKQLFREATRRWYMV 171
           R+PF SL+EN+    KSEVS+   +T SS    C  T       S      E  RRW MV
Sbjct: 569 RVPFHSLLENAACKSKSEVSILGAKTRSSNSVNCTGTTGNATNSSFNNSAGEGKRRWNMV 628

Query: 172 VDTNSLLNKESRRSXXXXXXXXXXXXIIPRMVLRELDYLKKRGSLTRKATEISAVLQWIE 351
           VD   LLNKESR+S            IIPRMV+RELD LK+RGSL R+ +E+S VLQWIE
Sbjct: 629 VDATCLLNKESRKSLQLLQGLKGTQLIIPRMVIRELDCLKRRGSLFRRISEVSLVLQWIE 688

Query: 352 ECMVETK*WLHVQNSME 402
           ECMV+TK W+HVQ+S+E
Sbjct: 689 ECMVKTKWWIHVQSSIE 705


>ref|XP_002327231.1| predicted protein [Populus trichocarpa] gi|222835601|gb|EEE74036.1|
            predicted protein [Populus trichocarpa]
          Length = 1079

 Score =  114 bits (285), Expect = 8e-24
 Identities = 65/137 (47%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4    RMPFLSLVENSNSDRKSEVSVPVTRTTSS----CNQTMETTHPFSPKQLFREATRRWYMV 171
            R+P  SL+ N + +  SE SVP   T SS    C+Q M  ++         +  RRW MV
Sbjct: 774  RVPLQSLLVNFSGNSNSEASVPNDATRSSISVNCSQIMRKSN------FTGDGKRRWTMV 827

Query: 172  VDTNSLLNKESRRSXXXXXXXXXXXXIIPRMVLRELDYLKKRGSLTRKATEISAVLQWIE 351
             DT SL++KESR+S            +IP+MV+RELD LK+R SL RK TE S VL+WIE
Sbjct: 828  ADTASLVDKESRKSLQLLQGLKGTHLVIPKMVIRELDCLKRRSSLFRKKTEASLVLEWIE 887

Query: 352  ECMVETK*WLHVQNSME 402
            ECMV T  W+HVQ+SME
Sbjct: 888  ECMVRTPWWIHVQSSME 904


>ref|XP_002526845.1| conserved hypothetical protein [Ricinus communis]
           gi|223533849|gb|EEF35580.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 789

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/135 (46%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
 Frame = +1

Query: 4   RMPFLSLVENSNSDRKSEVSVP--VTRTTSSCNQTMETTHPFSPKQLFREATRRWYMVVD 177
           R+P   L+ NS     S+ SVP    R+++S N T E +          +  RRW M+ D
Sbjct: 496 RVPLQLLLANSPGKSLSDASVPDAAARSSNSINCTRENSI-----NSVGDGRRRWTMIAD 550

Query: 178 TNSLLNKESRRSXXXXXXXXXXXXIIPRMVLRELDYLKKRGSLTRKATEISAVLQWIEEC 357
           T SLL+K SR+S            +IPRMV+RELD LK+RGSL R+ TE   VLQWIEEC
Sbjct: 551 TTSLLDKASRKSLQLLEGLKGTHLVIPRMVIRELDSLKRRGSLFRRTTEADLVLQWIEEC 610

Query: 358 MVETK*WLHVQNSME 402
           MV+TK W+HVQ+S+E
Sbjct: 611 MVKTKWWIHVQSSVE 625


>gb|AED89990.1| PSL3c [Solanum chacoense x Solanum tuberosum]
          Length = 764

 Score =  106 bits (265), Expect = 2e-21
 Identities = 70/189 (37%), Positives = 93/189 (49%), Gaps = 25/189 (13%)
 Frame = +1

Query: 4    RMPFLSL-VENSNSDRKSEV---SVPVTRTTSSCNQTMETTHPFSPKQLFREATRRWYMV 171
            R+PF  L V NS +  KSE     V +      C + ME  +PF+     RE  RRW MV
Sbjct: 529  RVPFQPLLVTNSPNKTKSESPERKVKLNAKPVKCQEIMEA-YPFANNNA-REEKRRWTMV 586

Query: 172  VDTNSLLNKESRRSXXXXXXXXXXXXIIPRMVLRELDYLKKRGSLTRKATEISAVLQWIE 351
            VD  SLLNKESR++            IIPR+ LRELDY+K+R S  R+ATE+ A + WI+
Sbjct: 587  VDITSLLNKESRKALQLLQGLKGTCLIIPRIGLRELDYMKRRASFFRRATEVFAAIDWID 646

Query: 352  ECMVETK*WLHVQNSMESM---------------------XXXXXXXXXXXXXXLDKVIS 468
            +CMV  K W+HVQ+ +E                                     L +++S
Sbjct: 647  DCMVNAKSWVHVQSCVEETRPVAPTPPATAPPYFFNEENGIFPVGSVLSSPHCGLAEIVS 706

Query: 469  PMVDDHILD 495
            P  DDHIL+
Sbjct: 707  PTADDHILE 715


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