BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029310
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...    76   6e-14
ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-12
ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-12
emb|CBI36552.3| unnamed protein product [Vitis vinifera]               52   2e-10
ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-10

>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score = 75.9 bits (185), Expect(2) = 6e-14
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = -1

Query: 361 GFTQNGNCGVAVSMFEGMQNAGMRKYEVTLVGSISACSQLGAEKCAQWINDLSEKEGLSP 182
           G+ QN     A+ +FE MQ AG++  EVTLVG ISAC+QLGA K A W+ D++E+ G  P
Sbjct: 246 GYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGP 305

Query: 181 VTDVGVGSALM 149
            ++V VGSAL+
Sbjct: 306 TSNVVVGSALI 316



 Score = 26.2 bits (56), Expect(2) = 6e-14
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -2

Query: 144 IYP*CGSLEEAYQFFESM 91
           +Y  CGS+E+AY+ FE M
Sbjct: 318 MYAKCGSVEDAYKVFERM 335


>ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score = 73.6 bits (179), Expect(2) = 1e-12
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = -1

Query: 361 GFTQNGNCGVAVSMFEGMQNAGMRKYEVTLVGSISACSQLGAEKCAQWINDLSEKEGLSP 182
           G+ QNG    A+  F+ MQ+ GM   EVTL G ISAC+QLGA K A WI D++E+ G  P
Sbjct: 249 GYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGP 308

Query: 181 VTDVGVGSALM 149
             +V VGSAL+
Sbjct: 309 SGNVVVGSALI 319



 Score = 24.3 bits (51), Expect(2) = 1e-12
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 144 IYP*CGSLEEAYQFFESM 91
           +Y  CGS +EAY+ FE M
Sbjct: 321 MYSKCGSPDEAYKVFEVM 338


>ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score = 73.6 bits (179), Expect(2) = 1e-12
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = -1

Query: 361 GFTQNGNCGVAVSMFEGMQNAGMRKYEVTLVGSISACSQLGAEKCAQWINDLSEKEGLSP 182
           G+ QNG    A+  F+ MQ+ GM   EVTL G ISAC+QLGA K A WI D++E+ G  P
Sbjct: 249 GYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGP 308

Query: 181 VTDVGVGSALM 149
             +V VGSAL+
Sbjct: 309 SGNVVVGSALI 319



 Score = 24.3 bits (51), Expect(2) = 1e-12
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 144 IYP*CGSLEEAYQFFESM 91
           +Y  CGS +EAY+ FE M
Sbjct: 321 MYSKCGSPDEAYKVFEVM 338


>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score = 51.6 bits (122), Expect(2) = 2e-10
 Identities = 23/57 (40%), Positives = 36/57 (63%)
 Frame = -1

Query: 364 AGFTQNGNCGVAVSMFEGMQNAGMRKYEVTLVGSISACSQLGAEKCAQWINDLSEKE 194
           +G+ QNG    A+S+F+ MQ   +R   VT+   +SAC+QLGA    +W++DL  +E
Sbjct: 382 SGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRE 438



 Score = 38.5 bits (88), Expect(2) = 2e-10
 Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 6/39 (15%)
 Frame = -3

Query: 101 LRACSRTGMVEE------SMHKDYGVVPQEDHYACMVDL 3
           L ACS  G+V E      SM  D+G  P  +HYACMVDL
Sbjct: 462 LYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDL 500


>ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|222836766|gb|EEE75159.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score = 67.4 bits (163), Expect(2) = 2e-10
 Identities = 35/72 (48%), Positives = 44/72 (61%)
 Frame = -1

Query: 364 AGFTQNGNCGVAVSMFEGMQNAGMRKYEVTLVGSISACSQLGAEKCAQWINDLSEKEGLS 185
           +GF QN     A+  FE MQ  G+   E+TL+G ISAC+QLGA K A WI D++EK    
Sbjct: 252 SGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFG 311

Query: 184 PVTDVGVGSALM 149
               V VGSAL+
Sbjct: 312 GKHSVVVGSALI 323



 Score = 22.7 bits (47), Expect(2) = 2e-10
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 144 IYP*CGSLEEAYQFFESM 91
           +Y  CGS+ +AY+ F+ M
Sbjct: 325 MYSKCGSVGDAYRVFQGM 342