BLASTX nr result

ID: Cimicifuga21_contig00029244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029244
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    57   2e-06

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 46/126 (36%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = -2

Query: 454 REVPQPVNKLNLYRRNFTEYGGQLCMLQNKRGREIVELWVMKDYGVKESWTXXXXXXXXX 275
           REV QP  K   +  +     G LC L N  G E V++W+MK+YGVKESWT         
Sbjct: 241 REVLQPEYKDKNFYIDLGVLRGCLCFLANFLG-ERVDVWMMKEYGVKESWTKLFSVAQYE 299

Query: 274 XXXXDPYISSFRQICLIKSGLVLLTCHVN-NLISYDPKTKTRSSRQIHDSLEFFEARTYV 98
                 ++ S + +   KSG  +L  H N +L  YD K K   +R I      FEA T+V
Sbjct: 300 VIG---FLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKNR-IPGIPYSFEADTFV 355

Query: 97  ESIVGL 80
           ES++ +
Sbjct: 356 ESLISV 361


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