BLASTX nr result

ID: Cimicifuga21_contig00029232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029232
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329002.1| predicted protein [Populus trichocarpa] gi|2...   139   4e-31
ref|XP_002325902.1| predicted protein [Populus trichocarpa] gi|1...   129   3e-28
ref|XP_002514856.1| conserved hypothetical protein [Ricinus comm...   125   5e-27
ref|XP_002301646.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002278899.1| PREDICTED: uncharacterized protein LOC100259...   123   3e-26

>ref|XP_002329002.1| predicted protein [Populus trichocarpa] gi|222839236|gb|EEE77587.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  139 bits (350), Expect = 4e-31
 Identities = 79/165 (47%), Positives = 98/165 (59%), Gaps = 1/165 (0%)
 Frame = +3

Query: 6   MRDRMERLVFLPFSIGCTSQSSIAVVENHHXXXXXXXXXXXXXXXVGEEESLSSAK-MKN 182
           MRDRMERLV LPFS GC S+SS+A+  +                   +EES SSA+ MK 
Sbjct: 1   MRDRMERLVLLPFSFGCVSESSVAIGVHQPRRAKTDTNLSATRTKEEDEESSSSAESMKT 60

Query: 183 PIGFLSISKPNISSGIQRXXXXXXXXXXXXXYKXXXXXXXXXXXIGFPTDVKHVTHIGWD 362
            + FL++SKPNIS+G+ R             YK           IG PTDVKHVTHIGWD
Sbjct: 61  SLKFLALSKPNISTGLHRLIKGFKNFSQLFAYKEEIEEFEMEMEIGLPTDVKHVTHIGWD 120

Query: 363 GGSTNTTNPLMGWDELKAPELLSLPTYSLKQFEIAMASQADSPVV 497
             S  TTNP+ GWD L +PELL L +   +QFE+AMA+QA+SP+V
Sbjct: 121 -ASAPTTNPVHGWDNLISPELLHLQSGISRQFELAMAAQANSPLV 164


>ref|XP_002325902.1| predicted protein [Populus trichocarpa] gi|118481449|gb|ABK92667.1|
           unknown [Populus trichocarpa]
           gi|222862777|gb|EEF00284.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  129 bits (325), Expect = 3e-28
 Identities = 73/169 (43%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
 Frame = +3

Query: 6   MRDRMERLVFLPFSIGCTSQSSIAV-VENHHXXXXXXXXXXXXXXXVGEEESLSSAKMKN 182
           MRDRMERLV LPFSIGC S+SS+A+ V                     EE S S+   KN
Sbjct: 1   MRDRMERLVLLPFSIGCVSESSVAIGVHQTKRAKTDTNLSASRTQEEDEESSSSTESTKN 60

Query: 183 PIGFLSISKPNISSGIQRXXXXXXXXXXXXXYKXXXXXXXXXXXIGFPTDVKHVTHIGWD 362
            +  L++SKPN+S+G  +             YK           IG PT+VKHVTHIGWD
Sbjct: 61  SLKLLALSKPNVSTGFNKLVKGLKTFPQLFAYKEEMEELEVEMEIGLPTNVKHVTHIGWD 120

Query: 363 GGSTNTTNPLMGWDELKAPELLSLPTYSLKQFEIAMASQADSPVVIGSS 509
              +  TNP+ GWD L + +LLSL + + +QFE+A+A QA+SP+V  SS
Sbjct: 121 --DSPNTNPVQGWDNLISTDLLSLQSATSRQFELAIAGQANSPLVRASS 167


>ref|XP_002514856.1| conserved hypothetical protein [Ricinus communis]
           gi|223545907|gb|EEF47410.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score =  125 bits (315), Expect = 5e-27
 Identities = 79/177 (44%), Positives = 102/177 (57%), Gaps = 9/177 (5%)
 Frame = +3

Query: 6   MRDRMERLVFLPFSIGCTSQSSIAVVENHHXXXXXXXXXXXXXXXV-----GEEESLSSA 170
           MRDRMERLV LPFSIGC S+SS+A+  + H               +      +EESLSS 
Sbjct: 1   MRDRMERLVLLPFSIGCVSESSVAIGHHVHHPRGSKPPPDSNPSPIIRTKEEDEESLSST 60

Query: 171 K-MKNPIGFLSISKPNISSGIQRXXXXXXXXXXXXXYKXXXXXXXXXXXIGFPTDVKHVT 347
           + MKN +   ++SKPNIS+   R             Y+           IG PTDVKHVT
Sbjct: 61  ESMKNAMKVFALSKPNISNRFHRIVKGFKTFSQLFVYE--EEIEELEMEIGLPTDVKHVT 118

Query: 348 HIGWDGGSTNTTNPLMGWDELKAPELLSL-PTYSLKQFEIAMASQAD--SPVVIGSS 509
           HIGWDG +   TNP+ GW+ L +PELL+L P  SL+QFE++MA+Q D  SP++  SS
Sbjct: 119 HIGWDGSA--NTNPIQGWENLISPELLTLQPPNSLRQFELSMAAQTDHHSPLLRPSS 173


>ref|XP_002301646.1| predicted protein [Populus trichocarpa] gi|222843372|gb|EEE80919.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  123 bits (309), Expect = 2e-26
 Identities = 72/170 (42%), Positives = 90/170 (52%), Gaps = 6/170 (3%)
 Frame = +3

Query: 6   MRDRMERLVFLPFSIGCTSQSSIAVV---ENHHXXXXXXXXXXXXXXXVGEEESLSSAKM 176
           MRDR ER V LPFSIGC SQSS+AV    E                   GEE S      
Sbjct: 1   MRDRKERFVVLPFSIGCASQSSVAVATAAEPCKKPKHETKSSHATRRREGEESSCQEKTK 60

Query: 177 KNPIGFLSISKPNISSGIQRXXXXXXXXXXXXXYKXXXXXXXXXXX-IGFPTDVKHVTHI 353
            N    L++ KPN+SSG+ +             YK            IG+PTDVKH+THI
Sbjct: 61  SNTFSSLALPKPNMSSGMYKLVRGIKSLSQIFVYKEDDDDRMEREMEIGYPTDVKHLTHI 120

Query: 354 GWDGGSTNTT--NPLMGWDELKAPELLSLPTYSLKQFEIAMASQADSPVV 497
           G DG +T TT  NP+ GW+ LK PE++S P+ SL+  E+AMA+QA  P+V
Sbjct: 121 GLDGSTTTTTATNPIKGWESLKPPEIISFPSISLRHLELAMAAQAHGPLV 170


>ref|XP_002278899.1| PREDICTED: uncharacterized protein LOC100259906 [Vitis vinifera]
          Length = 148

 Score =  123 bits (308), Expect = 3e-26
 Identities = 70/151 (46%), Positives = 82/151 (54%)
 Frame = +3

Query: 6   MRDRMERLVFLPFSIGCTSQSSIAVVENHHXXXXXXXXXXXXXXXVGEEESLSSAKMKNP 185
           MRDRMERLV LPF+ GC S +S+AV E                    ++ES S + MKN 
Sbjct: 1   MRDRMERLVVLPFTAGCVSYASVAVSEQQPRRSKPDTNSSTIRAQEEDQESFSDS-MKNS 59

Query: 186 IGFLSISKPNISSGIQRXXXXXXXXXXXXXYKXXXXXXXXXXXIGFPTDVKHVTHIGWDG 365
              L++ KPNIS+G  R              K           IGFPTDVKHVTHIGWDG
Sbjct: 60  FRLLALPKPNISTGFHRLVKGFKNFSQFFVPKEDMEDSDEEMQIGFPTDVKHVTHIGWDG 119

Query: 366 GSTNTTNPLMGWDELKAPELLSLPTYSLKQF 458
            +  TTNP+ GWD L  PELLSLP  SL+QF
Sbjct: 120 SA--TTNPIKGWDNLIPPELLSLPAVSLRQF 148


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