BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029230
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27471.3| unnamed protein product [Vitis vinifera]              149   3e-34
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ...   148   4e-34
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]   146   1e-33
ref|XP_002521565.1| pentatricopeptide repeat-containing protein,...   141   5e-32

>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  149 bits (375), Expect = 3e-34
 Identities = 66/109 (60%), Positives = 85/109 (77%)
 Frame = -1

Query: 328 ALSNSGNLTYARKIFDRIPSPNTFKWNMMIKAYSDHDDPEQAFLLYHQMLHSSVEHNAFT 149
           A  NSG+L YAR +FDRI  PNTF WN MI+ YS+  +PE+A LLYH ML+ SV HNA+T
Sbjct: 61  ASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYT 120

Query: 148 FPFLFKACAKLSVLEETQQIHSRVVKTGFSSDLYSANSLLHAYAKSGSV 2
           FPFL KAC+ +S LEETQQIH+ ++K GF S++Y+ NSLL+ Y+KSG +
Sbjct: 121 FPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDI 169


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  149 bits (375), Expect = 3e-34
 Identities = 66/109 (60%), Positives = 85/109 (77%)
 Frame = -1

Query: 328 ALSNSGNLTYARKIFDRIPSPNTFKWNMMIKAYSDHDDPEQAFLLYHQMLHSSVEHNAFT 149
           A  NSG+L YAR +FDRI  PNTF WN MI+ YS+  +PE+A LLYH ML+ SV HNA+T
Sbjct: 61  ASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYT 120

Query: 148 FPFLFKACAKLSVLEETQQIHSRVVKTGFSSDLYSANSLLHAYAKSGSV 2
           FPFL KAC+ +S LEETQQIH+ ++K GF S++Y+ NSLL+ Y+KSG +
Sbjct: 121 FPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDI 169


>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513376|gb|AES94999.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/103 (65%), Positives = 82/103 (79%)
 Frame = -1

Query: 310 NLTYARKIFDRIPSPNTFKWNMMIKAYSDHDDPEQAFLLYHQMLHSSVEHNAFTFPFLFK 131
           NLTYAR +FDRI SPNT  WN MI+AYS+ +DPE+A LLYHQMLH S+ HNA+TFPFL K
Sbjct: 60  NLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLK 119

Query: 130 ACAKLSVLEETQQIHSRVVKTGFSSDLYSANSLLHAYAKSGSV 2
           AC+ LS L ET QIH +++K GF S++Y+ NSLL  YA SGS+
Sbjct: 120 ACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSI 162



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/104 (29%), Positives = 47/104 (45%)
 Frame = -1

Query: 313 GNLTYARKIFDRIPSPNTFKWNMMIKAYSDHDDPEQAFLLYHQMLHSSVEHNAFTFPFLF 134
           GN+  A KIF  +P  N   W  MI  +      ++A  L  QML + ++ +  T     
Sbjct: 191 GNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSL 250

Query: 133 KACAKLSVLEETQQIHSRVVKTGFSSDLYSANSLLHAYAKSGSV 2
            ACA L  LE+ + IH+ + K     D     +L+  Y K G +
Sbjct: 251 SACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEM 294


>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  146 bits (369), Expect = 1e-33
 Identities = 65/109 (59%), Positives = 84/109 (77%)
 Frame = -1

Query: 328 ALSNSGNLTYARKIFDRIPSPNTFKWNMMIKAYSDHDDPEQAFLLYHQMLHSSVEHNAFT 149
           A  NSG+L YAR +FDRI  PNTF WN MI+ YS+  +PE+A LLYH ML+ SV HNA+T
Sbjct: 61  ASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYT 120

Query: 148 FPFLFKACAKLSVLEETQQIHSRVVKTGFSSDLYSANSLLHAYAKSGSV 2
           FPFL KAC+ +S  EETQQIH+ ++K GF S++Y+ NSLL+ Y+KSG +
Sbjct: 121 FPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDI 169


>ref|XP_002521565.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539243|gb|EEF40836.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 338

 Score =  141 bits (356), Expect = 5e-32
 Identities = 63/110 (57%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
 Frame = -1

Query: 328 ALSNSGNLTYARKIFDRIPS-PNTFKWNMMIKAYSDHDDPEQAFLLYHQMLHSSVEHNAF 152
           A  NSGNLTYA+ +FD + S PNT+ WN M++ Y+D + PE+A +LYHQML  SV HN +
Sbjct: 53  ASPNSGNLTYAKIVFDSLSSRPNTYIWNAMLRGYADSNKPEEALILYHQMLCHSVPHNGY 112

Query: 151 TFPFLFKACAKLSVLEETQQIHSRVVKTGFSSDLYSANSLLHAYAKSGSV 2
           TFPFL KAC+ LS +E+ QQ+H++++K GF SD+Y+ NSLLHAYA SG +
Sbjct: 113 TFPFLLKACSSLSAIEKAQQVHAQIIKLGFGSDVYTTNSLLHAYAASGFI 162