BLASTX nr result

ID: Cimicifuga21_contig00029227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029227
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300559.1| predicted protein [Populus trichocarpa] gi|2...   110   4e-22
ref|XP_002330559.1| predicted protein [Populus trichocarpa] gi|2...   104   2e-20
ref|XP_002281044.2| PREDICTED: uncharacterized protein LOC100261...   102   1e-19
emb|CBI20823.3| unnamed protein product [Vitis vinifera]              102   1e-19
ref|XP_002879515.1| EMB1611/MEE22 [Arabidopsis lyrata subsp. lyr...    79   1e-12

>ref|XP_002300559.1| predicted protein [Populus trichocarpa] gi|222847817|gb|EEE85364.1|
            predicted protein [Populus trichocarpa]
          Length = 1716

 Score =  110 bits (274), Expect = 4e-22
 Identities = 82/245 (33%), Positives = 114/245 (46%), Gaps = 6/245 (2%)
 Frame = -3

Query: 717  RVDVINLESDSNKLKFKSFGNSNCSALHQLEGSDCRIGEIQDEDVGLHITTDTGNRFPFQ 538
            R D I++E  SN+LK +SFG S    LH+ EG      +I     G   + D+G      
Sbjct: 1103 RSDAIDVEISSNQLKDRSFGTSRADLLHENEGPADSF-DILGNRSGTCNSMDSGKVSDGW 1161

Query: 537  VSKSSAEMEVAK---QASGYAAMEVPYANCEGHKHKGISQYFVGFPNVKDKDXXXXXXXS 367
                 ++++       +S Y  ++ P     G  H  I +Y V F ++ D         +
Sbjct: 1162 TRDPGSDLDTEMLNIPSSRYEGLKFPIEGELGSIHDNIPKYCVMFSDINDTISMSRVFFA 1221

Query: 366  YQTCISNSSTVSQKVWMVDKFLVALAKEEGLLPKEKACVLFSLLLHNFLMVTSVNFRIFV 187
             QTC++  S   Q   MV K L AL  E  +LPKEKAC  F+LLL NF       FR F 
Sbjct: 1222 TQTCLARCSLDIQADCMVQKILRALKMEGKILPKEKACTFFTLLLLNFSASNWGKFRSFS 1281

Query: 186  ADDMHSCSNSFLTHMKTVMADTGTRNILLELFQLDTLFNLIESFLMDKRGMVY---KFQP 16
              D     +SF   +  V++D   RN+  E+  LD L  LIE FL+D + MVY     +P
Sbjct: 1282 DPDFLLGLDSFARDINAVVSDVEARNLFAEVCCLDELLGLIEEFLLDGKLMVYADLSSEP 1341

Query: 15   HSRCD 1
             S CD
Sbjct: 1342 LSGCD 1346


>ref|XP_002330559.1| predicted protein [Populus trichocarpa] gi|222872117|gb|EEF09248.1|
            predicted protein [Populus trichocarpa]
          Length = 1681

 Score =  104 bits (260), Expect = 2e-20
 Identities = 75/233 (32%), Positives = 106/233 (45%), Gaps = 3/233 (1%)
 Frame = -3

Query: 717  RVDVINLESDSNKLKFKSFGNSNCSALHQLEGSDCRIGEIQDEDVGLHITTDTGNRFPFQ 538
            R+DVI+ E  S +LK  SFG S    LH+  G    +  + +   G     D G     Q
Sbjct: 1068 RLDVIDAEISSKQLKDCSFGISCADGLHENGGHADSLDTLGNRS-GTGNDVDAGKASDGQ 1126

Query: 537  VSKSSAEMEVAK---QASGYAAMEVPYANCEGHKHKGISQYFVGFPNVKDKDXXXXXXXS 367
                 + +E+      +S Y  ++ P     G +H  I +Y V   ++KD         +
Sbjct: 1127 TRGCGSGLEIEMLNIPSSSYEGLKFPIEGEPGSRHDNIPKYCVMQSDIKDTISMSRVLSA 1186

Query: 366  YQTCISNSSTVSQKVWMVDKFLVALAKEEGLLPKEKACVLFSLLLHNFLMVTSVNFRIFV 187
             +TC++  S   Q   +V K L AL  EE  LPKEKAC  F+LLL NF       F  F 
Sbjct: 1187 TRTCMTRCSLDIQADCLVQKILCALKLEENSLPKEKACTFFTLLLLNFSACNWGQFGSFS 1246

Query: 186  ADDMHSCSNSFLTHMKTVMADTGTRNILLELFQLDTLFNLIESFLMDKRGMVY 28
              D   C +SF   +   ++D   RN+  E   LD L  LIE FL+D + M+Y
Sbjct: 1247 DQDFLFCLDSFAKDIFAAVSDVEARNLFAEACCLDELLGLIEEFLLDGKLMIY 1299


>ref|XP_002281044.2| PREDICTED: uncharacterized protein LOC100261159 [Vitis vinifera]
          Length = 1460

 Score =  102 bits (253), Expect = 1e-19
 Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 8/236 (3%)
 Frame = -3

Query: 711  DVINLESDSNKLKFKSFGNSNCSALHQLEGSDCRIGEIQDEDVGLHITTDT-GNRFPFQV 535
            DVINLE +SN+ KF     S    L + +       + ++ +  +H      G     Q+
Sbjct: 825  DVINLEINSNQFKFNLSDTSQNPLLLKCDCLADSFEKPENSENAIHSPIYCEGKTCSNQI 884

Query: 534  SKSSAE-------MEVAKQASGYAAMEVPYANCEGHKHKGISQYFVGFPNVKDKDXXXXX 376
              S+AE       + + + A   +  EV      G  H  I ++ + F + K+       
Sbjct: 885  FGSNAEEGMPNISVSINEGAKFLSEDEV------GAPHDNIPEFCIVFSDTKENSCISRI 938

Query: 375  XXSYQTCISNSSTVSQKVWMVDKFLVALAKEEGLLPKEKACVLFSLLLHNFLMVTSVNFR 196
              + +TCI++   VS+  WMV++ + AL  E  LLPKEKACVLFSLLLHN         +
Sbjct: 939  LCAIRTCIAHCHLVSRSDWMVEEIMHALLMEVDLLPKEKACVLFSLLLHNLSGAALKICQ 998

Query: 195  IFVADDMHSCSNSFLTHMKTVMADTGTRNILLELFQLDTLFNLIESFLMDKRGMVY 28
              +  +   C +SF   + TVM++   R++  +L  LD L +LIE FLM K+ +VY
Sbjct: 999  NILTGESICCLDSFSAQINTVMSNVEMRSLFAKLCHLDELLSLIEEFLMGKKVLVY 1054


>emb|CBI20823.3| unnamed protein product [Vitis vinifera]
          Length = 884

 Score =  102 bits (253), Expect = 1e-19
 Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 8/236 (3%)
 Frame = -3

Query: 711 DVINLESDSNKLKFKSFGNSNCSALHQLEGSDCRIGEIQDEDVGLHITTDT-GNRFPFQV 535
           DVINLE +SN+ KF     S    L + +       + ++ +  +H      G     Q+
Sbjct: 249 DVINLEINSNQFKFNLSDTSQNPLLLKCDCLADSFEKPENSENAIHSPIYCEGKTCSNQI 308

Query: 534 SKSSAE-------MEVAKQASGYAAMEVPYANCEGHKHKGISQYFVGFPNVKDKDXXXXX 376
             S+AE       + + + A   +  EV      G  H  I ++ + F + K+       
Sbjct: 309 FGSNAEEGMPNISVSINEGAKFLSEDEV------GAPHDNIPEFCIVFSDTKENSCISRI 362

Query: 375 XXSYQTCISNSSTVSQKVWMVDKFLVALAKEEGLLPKEKACVLFSLLLHNFLMVTSVNFR 196
             + +TCI++   VS+  WMV++ + AL  E  LLPKEKACVLFSLLLHN         +
Sbjct: 363 LCAIRTCIAHCHLVSRSDWMVEEIMHALLMEVDLLPKEKACVLFSLLLHNLSGAALKICQ 422

Query: 195 IFVADDMHSCSNSFLTHMKTVMADTGTRNILLELFQLDTLFNLIESFLMDKRGMVY 28
             +  +   C +SF   + TVM++   R++  +L  LD L +LIE FLM K+ +VY
Sbjct: 423 NILTGESICCLDSFSAQINTVMSNVEMRSLFAKLCHLDELLSLIEEFLMGKKVLVY 478


>ref|XP_002879515.1| EMB1611/MEE22 [Arabidopsis lyrata subsp. lyrata]
            gi|297325354|gb|EFH55774.1| EMB1611/MEE22 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1287

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 46/135 (34%), Positives = 70/135 (51%)
 Frame = -3

Query: 444  HKGISQYFVGFPNVKDKDXXXXXXXSYQTCISNSSTVSQKVWMVDKFLVALAKEEGLLPK 265
            H  + ++FV F N++D+        +   C+    +V+++ W V   L +L  EE LL +
Sbjct: 801  HGHVLKHFVVFSNIEDQKSIIKIFHATNNCVQRCPSVTREQWAVPAILSSLKMEENLLAQ 860

Query: 264  EKACVLFSLLLHNFLMVTSVNFRIFVADDMHSCSNSFLTHMKTVMADTGTRNILLELFQL 85
            E+ CV  SLLLHNF MV S      +  D  SC +SF  H+  VMADT    +L E    
Sbjct: 861  ERVCVFLSLLLHNFSMVPSTKISNTLNVDSFSCLDSFSKHIYGVMADTEAGVMLSEF--S 918

Query: 84   DTLFNLIESFLMDKR 40
            + L +L++  L  +R
Sbjct: 919  EELLSLLQDLLSAQR 933


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