BLASTX nr result

ID: Cimicifuga21_contig00029225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029225
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278969.2| PREDICTED: guanine nucleotide-binding protei...   179   2e-43
ref|XP_002313556.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
ref|XP_002522320.1| conserved hypothetical protein [Ricinus comm...   166   1e-39
ref|XP_002867384.1| EMB2757 [Arabidopsis lyrata subsp. lyrata] g...   166   2e-39
ref|NP_194715.2| transducin/WD40 domain-containing protein [Arab...   160   8e-38

>ref|XP_002278969.2| PREDICTED: guanine nucleotide-binding protein subunit beta-like
           protein 1 homolog [Vitis vinifera]
           gi|302142603|emb|CBI19806.3| unnamed protein product
           [Vitis vinifera]
          Length = 382

 Score =  179 bits (455), Expect = 2e-43
 Identities = 80/96 (83%), Positives = 92/96 (95%)
 Frame = +1

Query: 202 KRPPPDPIAVLRGHRASVTDVCFHHSKPLLFTGASDGELRIWDSVQHRTLSSSWVHSAAH 381
           KRPPPDP+AVLRGHRASVTDVCFH S  +LFTG+SDGELRIWD+VQHRT+SS+WVHSAAH
Sbjct: 3   KRPPPDPVAVLRGHRASVTDVCFHPSNSILFTGSSDGELRIWDTVQHRTVSSAWVHSAAH 62

Query: 382 GIISVAASPLLGENKVVSQGRDGTVKYWDIEDGGLS 489
           G++ VAASPL+G+NK+VSQGRDGTVKYWDIE+GGLS
Sbjct: 63  GVVCVAASPLIGDNKLVSQGRDGTVKYWDIEEGGLS 98


>ref|XP_002313556.1| predicted protein [Populus trichocarpa] gi|222849964|gb|EEE87511.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/96 (82%), Positives = 89/96 (92%)
 Frame = +1

Query: 202 KRPPPDPIAVLRGHRASVTDVCFHHSKPLLFTGASDGELRIWDSVQHRTLSSSWVHSAAH 381
           KRP PDP+AVLRGHRASV D  FH SKPLLFTG++DGELRIWD+VQHRT+SSS VHSAAH
Sbjct: 3   KRPAPDPVAVLRGHRASVMDASFHPSKPLLFTGSTDGELRIWDTVQHRTVSSSRVHSAAH 62

Query: 382 GIISVAASPLLGENKVVSQGRDGTVKYWDIEDGGLS 489
           GIISVAASPL+G+NKV+SQGRDGTVK WDI++GGLS
Sbjct: 63  GIISVAASPLIGDNKVISQGRDGTVKCWDIDNGGLS 98


>ref|XP_002522320.1| conserved hypothetical protein [Ricinus communis]
           gi|223538398|gb|EEF40004.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score =  166 bits (421), Expect = 1e-39
 Identities = 75/99 (75%), Positives = 89/99 (89%)
 Frame = +1

Query: 193 MNKKRPPPDPIAVLRGHRASVTDVCFHHSKPLLFTGASDGELRIWDSVQHRTLSSSWVHS 372
           M K+ PPPDPI VLRGHRASVTD CFH SKP+LFTG++DGELRIWD+VQHRT+SS+WVHS
Sbjct: 1   MIKRPPPPDPITVLRGHRASVTDACFHPSKPILFTGSADGELRIWDTVQHRTISSAWVHS 60

Query: 373 AAHGIISVAASPLLGENKVVSQGRDGTVKYWDIEDGGLS 489
           AAHGIIS+A+  L G +KV+SQG+DGTVK WDI++GGLS
Sbjct: 61  AAHGIISIASCNLNGNDKVISQGKDGTVKLWDIQEGGLS 99


>ref|XP_002867384.1| EMB2757 [Arabidopsis lyrata subsp. lyrata]
           gi|297313220|gb|EFH43643.1| EMB2757 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 386

 Score =  166 bits (419), Expect = 2e-39
 Identities = 74/96 (77%), Positives = 87/96 (90%)
 Frame = +1

Query: 202 KRPPPDPIAVLRGHRASVTDVCFHHSKPLLFTGASDGELRIWDSVQHRTLSSSWVHSAAH 381
           KRPPPDP+AVLRGHR SV DV FH SKPLLFTG++DGELRIWD++QHR +SS+W HS A+
Sbjct: 3   KRPPPDPVAVLRGHRHSVMDVSFHPSKPLLFTGSADGELRIWDTIQHRAVSSAWAHSRAN 62

Query: 382 GIISVAASPLLGENKVVSQGRDGTVKYWDIEDGGLS 489
           G+++VAASP LGENK++SQGRDGTVK WDIEDGGLS
Sbjct: 63  GVLAVAASPWLGENKIISQGRDGTVKCWDIEDGGLS 98


>ref|NP_194715.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|75674124|dbj|BAE44475.1| WD repeat protein
           [Arabidopsis thaliana] gi|332660286|gb|AEE85686.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  160 bits (406), Expect = 8e-38
 Identities = 72/96 (75%), Positives = 86/96 (89%)
 Frame = +1

Query: 202 KRPPPDPIAVLRGHRASVTDVCFHHSKPLLFTGASDGELRIWDSVQHRTLSSSWVHSAAH 381
           KRPPPDP+AVLRGHR SV DV FH SK LLFTG++DGELRIWD++QHR +SS+W HS A+
Sbjct: 3   KRPPPDPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRAN 62

Query: 382 GIISVAASPLLGENKVVSQGRDGTVKYWDIEDGGLS 489
           G+++VAASP LGE+K++SQGRDGTVK WDIEDGGLS
Sbjct: 63  GVLAVAASPWLGEDKIISQGRDGTVKCWDIEDGGLS 98