BLASTX nr result
ID: Cimicifuga21_contig00029212
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00029212 (324 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632751.1| PREDICTED: uncharacterized protein LOC100240... 76 3e-12 ref|XP_002283988.1| PREDICTED: uncharacterized protein LOC100240... 76 3e-12 ref|XP_002326235.1| predicted protein [Populus trichocarpa] gi|2... 75 7e-12 ref|XP_002528632.1| conserved hypothetical protein [Ricinus comm... 63 3e-08 ref|XP_003553577.1| PREDICTED: uncharacterized protein LOC100807... 61 1e-07 >ref|XP_003632751.1| PREDICTED: uncharacterized protein LOC100240792 isoform 2 [Vitis vinifera] Length = 369 Score = 75.9 bits (185), Expect = 3e-12 Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 2/85 (2%) Frame = +2 Query: 41 MATKSFVLYLISSFSVAILLTFLLS--NSTQILSPHRLSSINSTLNHLGVNQSNGLSIST 214 MAT+ VLYL+S FSVA+L F + N P LSS+N+TL L + S S Sbjct: 1 MATRGLVLYLLSGFSVAVLSVFFFTDPNGNHTYPPSNLSSLNTTL--LQNPFPSVSSSSE 58 Query: 215 RVWPKLEFSWQSVLVTVIGFLGSAF 289 +VWP+L+FSW+ VL TVIGFLGSAF Sbjct: 59 KVWPELKFSWRIVLATVIGFLGSAF 83 >ref|XP_002283988.1| PREDICTED: uncharacterized protein LOC100240792 isoform 1 [Vitis vinifera] gi|297740033|emb|CBI30215.3| unnamed protein product [Vitis vinifera] Length = 469 Score = 75.9 bits (185), Expect = 3e-12 Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 2/85 (2%) Frame = +2 Query: 41 MATKSFVLYLISSFSVAILLTFLLS--NSTQILSPHRLSSINSTLNHLGVNQSNGLSIST 214 MAT+ VLYL+S FSVA+L F + N P LSS+N+TL L + S S Sbjct: 1 MATRGLVLYLLSGFSVAVLSVFFFTDPNGNHTYPPSNLSSLNTTL--LQNPFPSVSSSSE 58 Query: 215 RVWPKLEFSWQSVLVTVIGFLGSAF 289 +VWP+L+FSW+ VL TVIGFLGSAF Sbjct: 59 KVWPELKFSWRIVLATVIGFLGSAF 83 >ref|XP_002326235.1| predicted protein [Populus trichocarpa] gi|222833428|gb|EEE71905.1| predicted protein [Populus trichocarpa] Length = 460 Score = 74.7 bits (182), Expect = 7e-12 Identities = 43/82 (52%), Positives = 53/82 (64%) Frame = +2 Query: 41 MATKSFVLYLISSFSVAILLTFLLSNSTQILSPHRLSSINSTLNHLGVNQSNGLSISTRV 220 MAT+ VLYL+S FSVAIL F LS+ + SP+ S I + S LS + +V Sbjct: 1 MATRGLVLYLLSGFSVAILSVFFLSHPNEKASPNPNSDIFA---------SPYLSTTDKV 51 Query: 221 WPKLEFSWQSVLVTVIGFLGSA 286 WPKLEFSW++VL TVIG LGSA Sbjct: 52 WPKLEFSWRTVLATVIGLLGSA 73 >ref|XP_002528632.1| conserved hypothetical protein [Ricinus communis] gi|223531921|gb|EEF33735.1| conserved hypothetical protein [Ricinus communis] Length = 449 Score = 62.8 bits (151), Expect = 3e-08 Identities = 40/82 (48%), Positives = 48/82 (58%) Frame = +2 Query: 41 MATKSFVLYLISSFSVAILLTFLLSNSTQILSPHRLSSINSTLNHLGVNQSNGLSISTRV 220 MAT+ VLYL +FS A+L S L H NSTL S+ +S + RV Sbjct: 1 MATRGLVLYLSLAFSAAVL-------SAVFLFDHHPYVKNSTLL-----SSHYISTTERV 48 Query: 221 WPKLEFSWQSVLVTVIGFLGSA 286 WP+LEFSW+ VL TVIGFLGSA Sbjct: 49 WPELEFSWRIVLATVIGFLGSA 70 >ref|XP_003553577.1| PREDICTED: uncharacterized protein LOC100807336 [Glycine max] Length = 459 Score = 60.8 bits (146), Expect = 1e-07 Identities = 34/83 (40%), Positives = 48/83 (57%) Frame = +2 Query: 41 MATKSFVLYLISSFSVAILLTFLLSNSTQILSPHRLSSINSTLNHLGVNQSNGLSISTRV 220 M+TK F++YL+SSFSVA+L LL ++ SSI+ + G ++ Sbjct: 1 MSTKGFIIYLLSSFSVALLSALLLPRTSNY---KHYSSISPPSHDYGFGND-------KL 50 Query: 221 WPKLEFSWQSVLVTVIGFLGSAF 289 WP+L+ W+ L TVIGFLGSAF Sbjct: 51 WPELKVGWRVALATVIGFLGSAF 73