BLASTX nr result

ID: Cimicifuga21_contig00029212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029212
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632751.1| PREDICTED: uncharacterized protein LOC100240...    76   3e-12
ref|XP_002283988.1| PREDICTED: uncharacterized protein LOC100240...    76   3e-12
ref|XP_002326235.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002528632.1| conserved hypothetical protein [Ricinus comm...    63   3e-08
ref|XP_003553577.1| PREDICTED: uncharacterized protein LOC100807...    61   1e-07

>ref|XP_003632751.1| PREDICTED: uncharacterized protein LOC100240792 isoform 2 [Vitis
           vinifera]
          Length = 369

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = +2

Query: 41  MATKSFVLYLISSFSVAILLTFLLS--NSTQILSPHRLSSINSTLNHLGVNQSNGLSIST 214
           MAT+  VLYL+S FSVA+L  F  +  N      P  LSS+N+TL  L     +  S S 
Sbjct: 1   MATRGLVLYLLSGFSVAVLSVFFFTDPNGNHTYPPSNLSSLNTTL--LQNPFPSVSSSSE 58

Query: 215 RVWPKLEFSWQSVLVTVIGFLGSAF 289
           +VWP+L+FSW+ VL TVIGFLGSAF
Sbjct: 59  KVWPELKFSWRIVLATVIGFLGSAF 83


>ref|XP_002283988.1| PREDICTED: uncharacterized protein LOC100240792 isoform 1 [Vitis
           vinifera] gi|297740033|emb|CBI30215.3| unnamed protein
           product [Vitis vinifera]
          Length = 469

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = +2

Query: 41  MATKSFVLYLISSFSVAILLTFLLS--NSTQILSPHRLSSINSTLNHLGVNQSNGLSIST 214
           MAT+  VLYL+S FSVA+L  F  +  N      P  LSS+N+TL  L     +  S S 
Sbjct: 1   MATRGLVLYLLSGFSVAVLSVFFFTDPNGNHTYPPSNLSSLNTTL--LQNPFPSVSSSSE 58

Query: 215 RVWPKLEFSWQSVLVTVIGFLGSAF 289
           +VWP+L+FSW+ VL TVIGFLGSAF
Sbjct: 59  KVWPELKFSWRIVLATVIGFLGSAF 83


>ref|XP_002326235.1| predicted protein [Populus trichocarpa] gi|222833428|gb|EEE71905.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/82 (52%), Positives = 53/82 (64%)
 Frame = +2

Query: 41  MATKSFVLYLISSFSVAILLTFLLSNSTQILSPHRLSSINSTLNHLGVNQSNGLSISTRV 220
           MAT+  VLYL+S FSVAIL  F LS+  +  SP+  S I +         S  LS + +V
Sbjct: 1   MATRGLVLYLLSGFSVAILSVFFLSHPNEKASPNPNSDIFA---------SPYLSTTDKV 51

Query: 221 WPKLEFSWQSVLVTVIGFLGSA 286
           WPKLEFSW++VL TVIG LGSA
Sbjct: 52  WPKLEFSWRTVLATVIGLLGSA 73


>ref|XP_002528632.1| conserved hypothetical protein [Ricinus communis]
           gi|223531921|gb|EEF33735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 449

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/82 (48%), Positives = 48/82 (58%)
 Frame = +2

Query: 41  MATKSFVLYLISSFSVAILLTFLLSNSTQILSPHRLSSINSTLNHLGVNQSNGLSISTRV 220
           MAT+  VLYL  +FS A+L       S   L  H     NSTL       S+ +S + RV
Sbjct: 1   MATRGLVLYLSLAFSAAVL-------SAVFLFDHHPYVKNSTLL-----SSHYISTTERV 48

Query: 221 WPKLEFSWQSVLVTVIGFLGSA 286
           WP+LEFSW+ VL TVIGFLGSA
Sbjct: 49  WPELEFSWRIVLATVIGFLGSA 70


>ref|XP_003553577.1| PREDICTED: uncharacterized protein LOC100807336 [Glycine max]
          Length = 459

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/83 (40%), Positives = 48/83 (57%)
 Frame = +2

Query: 41  MATKSFVLYLISSFSVAILLTFLLSNSTQILSPHRLSSINSTLNHLGVNQSNGLSISTRV 220
           M+TK F++YL+SSFSVA+L   LL  ++        SSI+   +  G           ++
Sbjct: 1   MSTKGFIIYLLSSFSVALLSALLLPRTSNY---KHYSSISPPSHDYGFGND-------KL 50

Query: 221 WPKLEFSWQSVLVTVIGFLGSAF 289
           WP+L+  W+  L TVIGFLGSAF
Sbjct: 51  WPELKVGWRVALATVIGFLGSAF 73


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