BLASTX nr result

ID: Cimicifuga21_contig00029205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029205
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX72883.1| MADS-box protein AGL12 [Aquilegia coerulea]            192   2e-47
ref|NP_001233764.1| TAGL12 transcription factor [Solanum lycoper...   173   1e-41
dbj|BAB70740.2| putative MADS-domain transcription factor MpMADS...   170   1e-40
ref|XP_002278239.1| PREDICTED: MADS-box transcription factor 26 ...   170   1e-40
ref|XP_002327290.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39

>gb|AFX72883.1| MADS-box protein AGL12 [Aquilegia coerulea]
          Length = 234

 Score =  192 bits (489), Expect = 2e-47
 Identities = 105/155 (67%), Positives = 114/155 (73%), Gaps = 34/155 (21%)
 Frame = +3

Query: 27  MARGKIQMKRIENVVHRQVTFCKRRAGLLKKAKELSILCDADVGVIIFSNQGKLYELSTK 206
           MARGK+QMKRIEN+VHRQVTFCKRRAGLLKKAKELSILCDADVGVIIFSN GKLY+LSTK
Sbjct: 1   MARGKVQMKRIENLVHRQVTFCKRRAGLLKKAKELSILCDADVGVIIFSNNGKLYDLSTK 60

Query: 207 GS----------------------------------MEGLLERYMKSAKGAQVSDEEANQ 284
           GS                                  M+GL+ERYMKSAKGAQVSDE+ANQ
Sbjct: 61  GSLFQPILSLVFITFSYYYSKLDLIVVFVQLYSQRSMQGLVERYMKSAKGAQVSDEDANQ 120

Query: 285 PMESDEEIAVLKQEIQLLHKGLRYTFGGVPGTMTL 389
             ES+EEIA+LKQEIQLL KGLRYTFGG  G MT+
Sbjct: 121 SSESEEEIAMLKQEIQLLQKGLRYTFGGGSGNMTV 155


>ref|NP_001233764.1| TAGL12 transcription factor [Solanum lycopersicum]
           gi|24967140|gb|AAM33103.2| TAGL12 transcription factor
           [Solanum lycopersicum]
          Length = 201

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/122 (70%), Positives = 103/122 (84%), Gaps = 1/122 (0%)
 Frame = +3

Query: 27  MARGKIQMKRIENVVHRQVTFCKRRAGLLKKAKELSILCDADVGVIIFSNQGKLYELSTK 206
           MARGK+QMKRIEN VHRQVTFCKRRAGLLKKAKELS+LCDA+VG+ IFS  GKLYEL+TK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEVGLFIFSAHGKLYELATK 60

Query: 207 GSMEGLLERYMKSAKGAQVSDE-EANQPMESDEEIAVLKQEIQLLHKGLRYTFGGVPGTM 383
           GSM+GL+ERY+KS KG +V++E +  QP++  EEI +LK EI +L KGL Y +GG  GTM
Sbjct: 61  GSMQGLIERYIKSTKGVEVAEEAKDTQPLDPKEEINMLKNEIDVLQKGLSYMYGGGAGTM 120

Query: 384 TL 389
           TL
Sbjct: 121 TL 122


>dbj|BAB70740.2| putative MADS-domain transcription factor MpMADS5 [Magnolia
           praecocissima]
          Length = 204

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/121 (66%), Positives = 101/121 (83%)
 Frame = +3

Query: 27  MARGKIQMKRIENVVHRQVTFCKRRAGLLKKAKELSILCDADVGVIIFSNQGKLYELSTK 206
           MARGKIQMKRIEN VHRQVTFCKRRAGLLKKA+  S+LCD D+G++IFS  GKLYEL+TK
Sbjct: 1   MARGKIQMKRIENSVHRQVTFCKRRAGLLKKARXXSVLCDVDIGLMIFSTHGKLYELATK 60

Query: 207 GSMEGLLERYMKSAKGAQVSDEEANQPMESDEEIAVLKQEIQLLHKGLRYTFGGVPGTMT 386
           G+MEGL+ERY+ +++GAQ+    A +P ESD+E+ +LKQEI+LL KGLR + GG  G MT
Sbjct: 61  GTMEGLIERYLGTSRGAQIEGGPAXZPPESDQEVFMLKQEIELLQKGLRNSIGGGMGNMT 120

Query: 387 L 389
           +
Sbjct: 121 M 121


>ref|XP_002278239.1| PREDICTED: MADS-box transcription factor 26 [Vitis vinifera]
           gi|296089407|emb|CBI39226.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/121 (69%), Positives = 101/121 (83%)
 Frame = +3

Query: 27  MARGKIQMKRIENVVHRQVTFCKRRAGLLKKAKELSILCDADVGVIIFSNQGKLYELSTK 206
           MARGKIQMKRIEN VHRQVTFCKRRAGLLKKAKELS+LCDA++G+ IFS  GKLYEL+TK
Sbjct: 1   MARGKIQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGIFIFSAHGKLYELATK 60

Query: 207 GSMEGLLERYMKSAKGAQVSDEEANQPMESDEEIAVLKQEIQLLHKGLRYTFGGVPGTMT 386
           G+M+GL+E+YMKS+ G+Q    +  Q +++ EEI +LK EI+LL KGLRY  GG  GTMT
Sbjct: 61  GTMQGLIEKYMKSSCGSQDDQAKEAQLLDTKEEINMLKHEIELLQKGLRYMLGGGAGTMT 120

Query: 387 L 389
           L
Sbjct: 121 L 121


>ref|XP_002327290.1| predicted protein [Populus trichocarpa] gi|222835660|gb|EEE74095.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  167 bits (422), Expect = 1e-39
 Identities = 84/123 (68%), Positives = 99/123 (80%), Gaps = 2/123 (1%)
 Frame = +3

Query: 27  MARGKIQMKRIENVVHRQVTFCKRRAGLLKKAKELSILCDADVGVIIFSNQGKLYELSTK 206
           MARGK+QMKRIEN VHRQVTFCKRR+GLLKKAKELS+LCDA++GV IFS  GKLYEL+TK
Sbjct: 1   MARGKVQMKRIENSVHRQVTFCKRRSGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 207 GSMEGLLERYMKSAKGAQVSDE--EANQPMESDEEIAVLKQEIQLLHKGLRYTFGGVPGT 380
           G+M+GL+ERYMKS++G Q      E    M+  EEI +LKQEI++L KGLRY FGG    
Sbjct: 61  GTMQGLIERYMKSSRGTQPEPAAIETQPDMDVKEEINMLKQEIEILQKGLRYMFGGRAAE 120

Query: 381 MTL 389
           MTL
Sbjct: 121 MTL 123


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