BLASTX nr result

ID: Cimicifuga21_contig00029194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029194
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324261.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_002516606.1| conserved hypothetical protein [Ricinus comm...   152   4e-35
ref|XP_002281904.2| PREDICTED: uncharacterized protein LOC100247...   147   7e-34
emb|CBI20936.3| unnamed protein product [Vitis vinifera]              147   7e-34
ref|NP_180137.3| embryo defective 2410 protein [Arabidopsis thal...   140   1e-31

>ref|XP_002324261.1| predicted protein [Populus trichocarpa] gi|222865695|gb|EEF02826.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/111 (64%), Positives = 92/111 (82%)
 Frame = -2

Query: 334 FSGRKVDFSAKKCGSRSSLKMNCIEERFSRSKALVRSVVPLWKEGLLLVRCSVFVAVISA 155
           F G+ V+      G R+ L++ C++E F +SKALVRS+ P+WKEGLL+VRCSVF AVIS 
Sbjct: 57  FCGKNVELLRNAIGLRNGLRVECVKEPFVQSKALVRSLAPVWKEGLLIVRCSVFGAVISG 116

Query: 154 VGLLVWYGQVKAVCYVESKLLPSVCSILSEYLQRELDFGKVRNISPLSITL 2
           V LLVWYGQ +A CY+E+KLLPSVCS+LS+Y+QRE+DFGKVRN+SPLS+TL
Sbjct: 117 VCLLVWYGQNRAKCYIEAKLLPSVCSVLSDYVQREIDFGKVRNVSPLSVTL 167


>ref|XP_002516606.1| conserved hypothetical protein [Ricinus communis]
           gi|223544426|gb|EEF45947.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2119

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/111 (68%), Positives = 90/111 (81%)
 Frame = -2

Query: 334 FSGRKVDFSAKKCGSRSSLKMNCIEERFSRSKALVRSVVPLWKEGLLLVRCSVFVAVISA 155
           F G+ V F     GSRS LK+ C+ E F++SKALVRS+ PLW+EGLL +R SVFVAVIS 
Sbjct: 69  FCGKYVVFLRNVLGSRSGLKVECVSEPFAQSKALVRSLAPLWEEGLLFIRGSVFVAVISG 128

Query: 154 VGLLVWYGQVKAVCYVESKLLPSVCSILSEYLQRELDFGKVRNISPLSITL 2
           V LLVWYGQ KA  YVE+KLLPSVCS+LS+Y+QRE+DFGKVR +SPLSITL
Sbjct: 129 VCLLVWYGQNKAKSYVEAKLLPSVCSVLSDYIQREIDFGKVRMVSPLSITL 179


>ref|XP_002281904.2| PREDICTED: uncharacterized protein LOC100247424 [Vitis vinifera]
          Length = 2197

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/111 (65%), Positives = 91/111 (81%)
 Frame = -2

Query: 334 FSGRKVDFSAKKCGSRSSLKMNCIEERFSRSKALVRSVVPLWKEGLLLVRCSVFVAVISA 155
           F GR +    +  GSRS  ++ C++E FSRS++LVRS+VPLWKEGLL VRCSVF+AVIS 
Sbjct: 9   FCGRNI-LLLRNFGSRSGSRVKCLKEPFSRSRSLVRSLVPLWKEGLLFVRCSVFLAVISG 67

Query: 154 VGLLVWYGQVKAVCYVESKLLPSVCSILSEYLQRELDFGKVRNISPLSITL 2
           V LLVWYG+ KA  ++E+KLLPSVCS+LSE++QR+LDFGKV  ISPLSITL
Sbjct: 68  VCLLVWYGRAKAKSFIEAKLLPSVCSVLSEHIQRDLDFGKVLKISPLSITL 118


>emb|CBI20936.3| unnamed protein product [Vitis vinifera]
          Length = 2180

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/111 (65%), Positives = 91/111 (81%)
 Frame = -2

Query: 334 FSGRKVDFSAKKCGSRSSLKMNCIEERFSRSKALVRSVVPLWKEGLLLVRCSVFVAVISA 155
           F GR +    +  GSRS  ++ C++E FSRS++LVRS+VPLWKEGLL VRCSVF+AVIS 
Sbjct: 57  FCGRNI-LLLRNFGSRSGSRVKCLKEPFSRSRSLVRSLVPLWKEGLLFVRCSVFLAVISG 115

Query: 154 VGLLVWYGQVKAVCYVESKLLPSVCSILSEYLQRELDFGKVRNISPLSITL 2
           V LLVWYG+ KA  ++E+KLLPSVCS+LSE++QR+LDFGKV  ISPLSITL
Sbjct: 116 VCLLVWYGRAKAKSFIEAKLLPSVCSVLSEHIQRDLDFGKVLKISPLSITL 166


>ref|NP_180137.3| embryo defective 2410 protein [Arabidopsis thaliana]
           gi|330252637|gb|AEC07731.1| embryo defective 2410
           protein [Arabidopsis thaliana]
          Length = 2166

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/111 (62%), Positives = 85/111 (76%)
 Frame = -2

Query: 334 FSGRKVDFSAKKCGSRSSLKMNCIEERFSRSKALVRSVVPLWKEGLLLVRCSVFVAVISA 155
           F G+ V    K   SRS +++ C++E F RSK LVRS+ P+W+EGL  +RCSVF AVIS 
Sbjct: 57  FCGKNVQLLRKSLDSRSRMEVKCLKEPFVRSKDLVRSLAPVWEEGLFFLRCSVFFAVISG 116

Query: 154 VGLLVWYGQVKAVCYVESKLLPSVCSILSEYLQRELDFGKVRNISPLSITL 2
           V LLVWYGQ KA  +VE+KLLPSVCS+LSE +QRE+DFGKVR +SPL ITL
Sbjct: 117 VCLLVWYGQNKARVFVETKLLPSVCSVLSETIQREVDFGKVRRVSPLCITL 167


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