BLASTX nr result

ID: Cimicifuga21_contig00029180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029180
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40035.3| unnamed protein product [Vitis vinifera]              189   9e-46
ref|XP_002518393.1| vacuolar protein sorting-associated protein,...   170   3e-40
ref|XP_003571321.1| PREDICTED: uncharacterized protein LOC100822...   150   3e-34
gb|EEE67937.1| hypothetical protein OsJ_25824 [Oryza sativa Japo...   138   2e-30
gb|EEC82816.1| hypothetical protein OsI_27603 [Oryza sativa Indi...   138   2e-30

>emb|CBI40035.3| unnamed protein product [Vitis vinifera]
          Length = 2796

 Score =  189 bits (479), Expect = 9e-46
 Identities = 115/283 (40%), Positives = 167/283 (59%), Gaps = 6/283 (2%)
 Frame = +2

Query: 2   LGAGGTEDSIQFSGVVSDEIVKDIYEVTQFHPMSPLEGVALTKNGIFLFSIKFNIHQINA 181
           LGAGGT+DS +FSGVVSDE++KDIYE T+FHP+      A   + I+L ++KF+IHQI+A
Sbjct: 110 LGAGGTDDSGEFSGVVSDEVIKDIYEATKFHPVLLSNVDAAAADEIYLSTVKFSIHQISA 169

Query: 182 TLLSKAYDKETTKIILDEMNMVFKLWEESWNILMLISSVEMDNLCTEKVILLTKRGSTEE 361
           TL     D+E   ++ + + +  KL EES  I+  ++SVEM   C++K ILL  R   +E
Sbjct: 170 TLRRTELDREIADLVFNGVTIKSKLCEESATIIASVNSVEMVYPCSKKFILLVGRPLLKE 229

Query: 362 ISLMNRGLPFITFEVDMSSVNHEPELSIKAVFEPFEVTYESEVXXXXXXXXXXXESFKFQ 541
            +++    P ++ +V++S  + E ELSIK + EP EVT + ++           +SF F 
Sbjct: 230 -NVVAHEQPSVSAQVNVSPSSQEAELSIKVMLEPLEVTCDPDIFLNFMEFYNMFKSFDFH 288

Query: 542 SKRVVSSLNRFEDVNVRLLSKAGYIFSNRTKIIWHACFSTAIIKVPWRHENSE-FIMVME 718
            KRV+ SLN  E+V  RLLSKA YI S+  K+ W   F+  II +PW + + E   MV+E
Sbjct: 289 HKRVLLSLNGIENVKSRLLSKAEYILSSHKKVSWDVSFNNIIISLPWTNADLEPCSMVLE 348

Query: 719 LGSLLFRSRDRAESPVSVSRNQHTILSTSYSDMS-----LGVQ 832
            GSL F S+    S  S + +Q   L    S +S     +GVQ
Sbjct: 349 SGSLFFTSKHDLSSLASNNEDQSYNLKGFLSSISTISIPMGVQ 391


>ref|XP_002518393.1| vacuolar protein sorting-associated protein, putative [Ricinus
            communis] gi|223542238|gb|EEF43780.1| vacuolar protein
            sorting-associated protein, putative [Ricinus communis]
          Length = 3482

 Score =  170 bits (431), Expect = 3e-40
 Identities = 107/265 (40%), Positives = 153/265 (57%), Gaps = 1/265 (0%)
 Frame = +2

Query: 2    LGAGGTEDSIQFSGVVSDEIVKDIYEVTQFHPMSPLEGVALTKNGIFLFSIKFNIHQINA 181
            LGAGGT+DS QFSGVVSDE+VKDIYE T+FHP     GV    + +F+ +IK +I QI A
Sbjct: 454  LGAGGTDDSTQFSGVVSDEVVKDIYEATKFHPSVFSSGVVDATDKMFICAIKLSIGQITA 513

Query: 182  TLLSKAYDKETTKIILDEMNMVFKLWEESWNILMLISSVEMDNLCTEKVILLTKRGSTEE 361
             L SK   ++   +   +  +  KLWEE   I+  I S +M   C E+++L   R     
Sbjct: 514  ALYSKYSSQKIADLEFKDTVIECKLWEELAAIMCFIRSGKMVYPCNERLVLQIGR----- 568

Query: 362  ISLMNRGLPFITFEVDMSSVNHEPELSIKAVFEPFEVTYESEVXXXXXXXXXXXESFKFQ 541
            + ++   L  I  EVD+S  N E ELS+K + +P EV+Y+ E            +S +FQ
Sbjct: 569  VCILISFLYVI--EVDVSP-NREVELSVKVMLQPLEVSYDVEFFLNFMEFFNVLKSIEFQ 625

Query: 542  SKRVVSSLNRFEDVNVRLLSKAGYIFSNRTKIIWHACFSTAIIKVPWRHE-NSEFIMVME 718
             KRV+ S N F+DV  RLLSK+ Y  S++TK+ W       II +P R   + ++ +V+E
Sbjct: 626  QKRVLWSFNEFKDVKTRLLSKSEYTLSSQTKLSWDVSILNIIINIPGRDAISGKYNLVLE 685

Query: 719  LGSLLFRSRDRAESPVSVSRNQHTI 793
            LGSL++ S+  AES V+  + Q  I
Sbjct: 686  LGSLVYTSKHGAESVVAKIQEQSHI 710


>ref|XP_003571321.1| PREDICTED: uncharacterized protein LOC100822443 [Brachypodium
            distachyon]
          Length = 1505

 Score =  150 bits (380), Expect = 3e-34
 Identities = 85/250 (34%), Positives = 136/250 (54%), Gaps = 1/250 (0%)
 Frame = +2

Query: 2    LGAGGTEDSIQFSGVVSDEIVKDIYEVTQFHPMSPLEGVALTKNGIFLFSIKFNIHQINA 181
            LGAGGT D+  F+GVVS++I+KDIYE T+FHP+S  E     +N    +S++ ++ QI  
Sbjct: 451  LGAGGTADTSSFAGVVSEDIIKDIYEGTEFHPVSSTENHLTKEN---YYSLRLSVSQIIT 507

Query: 182  TLLSKAYDKETTKIILDEMNMVFKLWEESWNILMLISSVEMDNLCTEKVILLTKRGSTEE 361
            T+ S+ +  +    +   +   +K+W++S  IL  + S+++ N   E  ++L ++ ST +
Sbjct: 508  TVTSRRFGMKLVDAMFTGLGTEYKIWDDSATILAWLDSLQITNPVNENKVVLAEKCSTGD 567

Query: 362  ISLMNRGLPFITFEVDMSSVNHEPELSIKAVFEPFEVTYESEVXXXXXXXXXXXESFKFQ 541
                  G+P I+ +VD    N   E S + V + F   YE E             SF+FQ
Sbjct: 568  ----GLGIPVISVQVDFPKSNENTEASTQVVVQEFSAIYEPEFFFNLLHIYDLFSSFQFQ 623

Query: 542  SKRVVSSLNRFEDVNVRLLSKAGYIFSNRTKIIWHACFSTAIIKVPWRH-ENSEFIMVME 718
              RV+SSLNRF++   RLLSK  Y+  NR K++W       I+++P ++    E  MV E
Sbjct: 624  HDRVLSSLNRFDNFGTRLLSKLKYMSVNRKKLLWDLRIHHFIVRLPSQNCGREELTMVFE 683

Query: 719  LGSLLFRSRD 748
               +  RS+D
Sbjct: 684  AADVSMRSKD 693


>gb|EEE67937.1| hypothetical protein OsJ_25824 [Oryza sativa Japonica Group]
          Length = 3139

 Score =  138 bits (347), Expect = 2e-30
 Identities = 93/285 (32%), Positives = 140/285 (49%), Gaps = 8/285 (2%)
 Frame = +2

Query: 2    LGAGGTEDSIQFSGVVSDEIVKDIYEVTQFHPMSPLEGVALTKNGIFLFSIKFNIHQINA 181
            LGAGGT D+  F+ V SD+I+KDIYE T+FHP+S  E     +N   LF  K  +  ++A
Sbjct: 405  LGAGGTADTSSFADV-SDDIIKDIYEGTEFHPISSAENHLTKENHYSLFVRKIGMKLVDA 463

Query: 182  TLLSKAYDKETTKIILDEMNMVFKLWEESWNILMLISSVEMDNLCTEKVILLTKRGSTEE 361
                              + +  K+W++S  IL  + S+E+ N   E  +LL ++ ST +
Sbjct: 464  MFTG--------------LGVECKIWDDSTTILACLDSLEIINPLNENKVLLAEKCSTGD 509

Query: 362  ISLMNRGLPFITFEVDMSSVNHEPELSIKAVFEPFEVTYESEVXXXXXXXXXXXESFKFQ 541
                  G P I+ +VD    NH PE   + V + F   YE               SF+FQ
Sbjct: 510  ----GLGTPVISVQVDCPKSNHSPEALTRVVVQEFSAIYEPVFIYNLMHIYDLFSSFQFQ 565

Query: 542  SKRVVSSLNRFEDVNVRLLSKAGYIFSNRTKIIWHACFSTAIIKVPWRH-ENSEFIMVME 718
              RV+SSLNRF+    RLLSK  Y  +NR K++W       ++++P R+    E IMV E
Sbjct: 566  HDRVLSSLNRFDSFGARLLSKLKYTSANRKKLLWDLRIHHFVVRLPSRNCGTEELIMVFE 625

Query: 719  LGSLLFRSRDRA-ESPVSVSRN------QHTILSTSYSDMSLGVQ 832
             G +  +S+D   ++  +  RN        T+ S    D+ +GV+
Sbjct: 626  AGDVSMQSKDTVRDASRTQERNSFLDYISKTLPSNFSDDLLIGVK 670


>gb|EEC82816.1| hypothetical protein OsI_27603 [Oryza sativa Indica Group]
          Length = 3400

 Score =  138 bits (347), Expect = 2e-30
 Identities = 93/285 (32%), Positives = 140/285 (49%), Gaps = 8/285 (2%)
 Frame = +2

Query: 2    LGAGGTEDSIQFSGVVSDEIVKDIYEVTQFHPMSPLEGVALTKNGIFLFSIKFNIHQINA 181
            LGAGGT D+  F+ V SD+I+KDIYE T+FHP+S  E     +N   LF  K  +  ++A
Sbjct: 439  LGAGGTADTSSFADV-SDDIIKDIYEGTEFHPISSAENHLTKENHYSLFVRKIGMKLVDA 497

Query: 182  TLLSKAYDKETTKIILDEMNMVFKLWEESWNILMLISSVEMDNLCTEKVILLTKRGSTEE 361
                              + +  K+W++S  IL  + S+E+ N   E  +LL ++ ST +
Sbjct: 498  MFTG--------------LGVECKIWDDSTTILACLDSLEIINPLNENKVLLAEKCSTGD 543

Query: 362  ISLMNRGLPFITFEVDMSSVNHEPELSIKAVFEPFEVTYESEVXXXXXXXXXXXESFKFQ 541
                  G P I+ +VD    NH PE   + V + F   YE               SF+FQ
Sbjct: 544  ----GLGTPVISVQVDCPKSNHSPEALTRVVVQEFSAIYEPVFIYNLMHIYDLFSSFQFQ 599

Query: 542  SKRVVSSLNRFEDVNVRLLSKAGYIFSNRTKIIWHACFSTAIIKVPWRH-ENSEFIMVME 718
              RV+SSLNRF+    RLLSK  Y  +NR K++W       ++++P R+    E IMV E
Sbjct: 600  HDRVLSSLNRFDSFGARLLSKLKYTSANRKKLLWDLRIHHFVVRLPSRNCGTEELIMVFE 659

Query: 719  LGSLLFRSRDRA-ESPVSVSRN------QHTILSTSYSDMSLGVQ 832
             G +  +S+D   ++  +  RN        T+ S    D+ +GV+
Sbjct: 660  AGDVSMQSKDTVRDASRTQERNSFLDYISKTLPSNFSDDLLIGVK 704


Top