BLASTX nr result

ID: Cimicifuga21_contig00029171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029171
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518845.1| hypothetical protein RCOM_1311780 [Ricinus c...   162   9e-38
ref|XP_002297968.1| predicted protein [Populus trichocarpa] gi|2...   162   9e-38
gb|AFK33967.1| unknown [Lotus japonicus]                              152   1e-34
ref|XP_002267421.1| PREDICTED: uncharacterized protein LOC100267...   103   8e-20
ref|XP_003627099.1| hypothetical protein MTR_8g017100 [Medicago ...    97   6e-18

>ref|XP_002518845.1| hypothetical protein RCOM_1311780 [Ricinus communis]
           gi|223541832|gb|EEF43378.1| hypothetical protein
           RCOM_1311780 [Ricinus communis]
          Length = 213

 Score =  162 bits (411), Expect = 9e-38
 Identities = 92/209 (44%), Positives = 126/209 (60%), Gaps = 13/209 (6%)
 Frame = -1

Query: 952 MGNCSLKGVVGDVDDPIRILTDSGGFLDFKPPTLVRNVVHNHPRYGVFRKGHL-SSPLLH 776
           MGNCSLK    ++   +R+LTD+GG +  + P L ++V+  HP YG+FR+GH  SSPL  
Sbjct: 1   MGNCSLKSAAEELPSNVRVLTDTGGIIQLRGPKLAKDVLVGHPGYGIFRQGHASSSPLSS 60

Query: 775 REQLSSGEVYYLLPLKEDKHVLNTIVRS--------RFDKEVVRKAIPRLSSGRKSDGTR 620
            E L  G+ YYLLPL++   + +T+V S        R +K ++    P +S         
Sbjct: 61  HEYLIGGQFYYLLPLRDLPVLCDTMVTSHVHDVGFARKEKNILATESPEVSFETALATQN 120

Query: 619 NKSPEPALEALSSSGNGVWKVKLVIDTKQLEEILLEQVNIEALIERMRTIANSEGS---- 452
           ++   PA++ L S  NGVWKVKL+I  KQLEEIL E+ N EALIE+MR  A +  S    
Sbjct: 121 DEVAGPAVQVLPSQSNGVWKVKLMISPKQLEEILSEERNTEALIEKMRMAAAASSSAASL 180

Query: 451 TPRRSKMYPSWGVGWKPSLTSVLKVSPGD 365
            PR+SK   SWGV WKP +++V KVSP D
Sbjct: 181 APRKSK--SSWGVAWKPCISNVFKVSPID 207


>ref|XP_002297968.1| predicted protein [Populus trichocarpa] gi|222845226|gb|EEE82773.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  162 bits (411), Expect = 9e-38
 Identities = 95/204 (46%), Positives = 130/204 (63%), Gaps = 12/204 (5%)
 Frame = -1

Query: 952 MGNCSLKGVVGDVDDPIRILTDSGGFLDFKPPTLVRNVVHNHPRYGVFRKGHLSSPLLHR 773
           MGNCSLKGV+ D  + IR+LTDSGG ++FK P L ++V+  +P Y +FR+GH SSPL   
Sbjct: 1   MGNCSLKGVMEDCPNNIRVLTDSGGVVEFKGPKLAKDVLREYPGYSIFRQGHASSPLSTH 60

Query: 772 EQLSSGEVYYLLPLKEDKHVLNTIVRSRFD------KEVVRKAI-----PRLSSGRKS-D 629
           E L  G+ Y LLP + ++ + +T V S+        ++V  + I     P++SS   + D
Sbjct: 61  EYLLGGQFYCLLPPQNEQKLCDTKVISQAQGMGLATEKVAMEWINEIEPPKMSSSTAAMD 120

Query: 628 GTRNKSPEPALEALSSSGNGVWKVKLVIDTKQLEEILLEQVNIEALIERMRTIANSEGST 449
              + +  P LE L + G+GVW+VKLVI TKQLEEIL EQVN EALIE+MR  A+S   T
Sbjct: 121 YVDDLATGPVLEVLPALGDGVWRVKLVIGTKQLEEILSEQVNTEALIEKMRMAASSANLT 180

Query: 448 PRRSKMYPSWGVGWKPSLTSVLKV 377
           PRRSK        WKP+L++V +V
Sbjct: 181 PRRSKS------SWKPALSNVFRV 198


>gb|AFK33967.1| unknown [Lotus japonicus]
          Length = 195

 Score =  152 bits (384), Expect = 1e-34
 Identities = 93/189 (49%), Positives = 109/189 (57%), Gaps = 3/189 (1%)
 Frame = -1

Query: 952 MGNCSLKG-VVGDVDDPIRILTDSGGFLDFKPPTLVRNVVHNHPRYGVFRKGHLSSPLLH 776
           MGNCS+KG   G+    I++L+DSG  L FK P  V  V+  +P YGVF +GH SSPLL 
Sbjct: 1   MGNCSIKGGTTGECHHSIQVLSDSGVILQFKDPKTVGQVLQQYPGYGVFLQGHASSPLLE 60

Query: 775 REQLSSGEVYYLLPLKEDKHVLNTIVRSRFDKEVVRKAIPRLSSGRKSDGTRNKSPEPAL 596
            E LS G +YYLLPLK               K  V +          SD   N S   AL
Sbjct: 61  HESLSYGLLYYLLPLK---------------KVQVEQKSSCSDGVSVSDYVENLSNGSAL 105

Query: 595 EALSSSGNGVWKVKLVIDTKQLEEILLEQVNIEALIERMRTIAN--SEGSTPRRSKMYPS 422
           E L S+ NGVW+VKLVIDT+QLEEIL EQVN EALIE+MR  A   S  S  R S+    
Sbjct: 106 EVLPSAQNGVWRVKLVIDTRQLEEILSEQVNTEALIEKMRMAATTCSATSPARSSRTMSI 165

Query: 421 WGVGWKPSL 395
           W VGWKP+L
Sbjct: 166 WKVGWKPTL 174


>ref|XP_002267421.1| PREDICTED: uncharacterized protein LOC100267812 [Vitis vinifera]
          Length = 191

 Score =  103 bits (256), Expect = 8e-20
 Identities = 68/188 (36%), Positives = 97/188 (51%), Gaps = 3/188 (1%)
 Frame = -1

Query: 952 MGNCSLKGVVGDVDDPIRILTDSGGFLDFKPPTLVRNVVHNHPRYGVFRKGHL-SSPLLH 776
           MGNC  KG  G V++ I+++T +GG ++   P    N+ +  P + +FR   L S PLLH
Sbjct: 1   MGNCVFKGF-GQVEEMIKVVTSNGGIMELYAPITAENITNEFPGHAIFRSPDLFSQPLLH 59

Query: 775 REQLSSGEVYYLLPLKEDKHVLNTIVRSRF-DKEVVRKAIPRLSSGRKSDGTRNKSPEPA 599
            E+L +GE+YYLLP    +  + T+  ++  D       I        + G   +S    
Sbjct: 60  SEELHAGELYYLLPQNAGR--VGTVSETKLSDNTSTSSLITPYRMSFDNQGLVKRSYPEV 117

Query: 598 LEALSSSGNGVWKVKLVIDTKQLEEILLEQVNIEALIERMRTIAN-SEGSTPRRSKMYPS 422
               SS+G  VWKVKLVI  +QL EILL++   EALIE +RT+A    G +   S    S
Sbjct: 118 FPRYSSTG--VWKVKLVISPEQLSEILLQESRTEALIESVRTVAKCGNGVSSMASSDQWS 175

Query: 421 WGVGWKPS 398
               WK S
Sbjct: 176 VASSWKGS 183


>ref|XP_003627099.1| hypothetical protein MTR_8g017100 [Medicago truncatula]
           gi|355521121|gb|AET01575.1| hypothetical protein
           MTR_8g017100 [Medicago truncatula]
          Length = 202

 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
 Frame = -1

Query: 952 MGNCSLKGVV-GDVDDP-IRILTDSGGFLDFKPPTLVRNVVHNHPRYGVFRKGH--LSSP 785
           MGNC  KG   GD ++  +RI+T +GG ++   P  V  + +  P +G+F+     LS P
Sbjct: 1   MGNCVFKGFHHGDFEETMVRIVTSNGGIMELYSPITVECITNEFPHHGIFKNNRNTLSKP 60

Query: 784 LLHREQLSSGEVYYLLPLKEDKHVLNTIVRSRFDKEVVRKAIPRLSSGRKSDGTRNK--- 614
           L   E+L +GE+YYLLPLK         +  +F +        R+S+  K+    N    
Sbjct: 61  LSKNEELQAGEIYYLLPLKN--------IVKQFGETFETLTPYRMSTCDKNSNNNNNNNN 112

Query: 613 --SPEPALEALSSSGNGVWKVKLVIDTKQLEEILLEQVNIEALIERMRTIANSEGSTPRR 440
             S        +SSG  VWKVKLVI  ++L EIL ++   EALIE +RT+A      P  
Sbjct: 113 SWSEHEVFPRYNSSG--VWKVKLVISPEKLSEILSQESRTEALIESVRTVAKCGNGVPSS 170

Query: 439 SKMYPS--WGV 413
           S +  S  W V
Sbjct: 171 SSVANSDQWSV 181


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