BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029132
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
ref|XP_002442779.1| hypothetical protein SORBIDRAFT_08g002705 [S...   115   3e-24
ref|XP_003576334.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23

>ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 692

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/136 (43%), Positives = 88/136 (64%)
 Frame = -2

Query: 412 GYAASVFRRTTDRDVISWSSMVVGYVQNGYFYEAQDTFREMITNKIEPNPIAITSIISAC 233
           G A  VF     +DV+SWS+++ GY QNG  + + + F EM+T  ++PN   + SI+ + 
Sbjct: 299 GMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSL 358

Query: 232 AGMSGIRQGKEIHLWAFKNGFEGQSFVGSALIDMYANCGSMREAGCIYKIMSDRDITIGN 53
           + M   R GKEIH ++ +NGF+   F+GSA ID Y+  GS+REA  + ++M  RD+ I N
Sbjct: 359 SEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWN 418

Query: 52  SMIVGYTLNGDTDLAL 5
           SM+ GY +NG+TD AL
Sbjct: 419 SMVAGYAVNGNTDSAL 434



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/124 (31%), Positives = 66/124 (53%)
 Frame = -2

Query: 376 RDVISWSSMVVGYVQNGYFYEAQDTFREMITNKIEPNPIAITSIISACAGMSGIRQGKEI 197
           RD++ W+SMV GY  NG    A   FR +      P+ + + S++  C   S + QGKE+
Sbjct: 412 RDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKEL 471

Query: 196 HLWAFKNGFEGQSFVGSALIDMYANCGSMREAGCIYKIMSDRDITIGNSMIVGYTLNGDT 17
           H +  ++       V +ALIDMY  C  + +   I+++++DRD    N++I  +  +G  
Sbjct: 472 HAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHE 531

Query: 16  DLAL 5
           D A+
Sbjct: 532 DEAI 535



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/130 (30%), Positives = 68/130 (52%)
 Frame = -2

Query: 412 GYAASVFRRTTDRDVISWSSMVVGYVQNGYFYEAQDTFREMITNKIEPNPIAITSIISAC 233
           G A SVF    +RD+ +W++M+ G V  G + +A   F  M +     + + I ++I AC
Sbjct: 198 GEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPAC 257

Query: 232 AGMSGIRQGKEIHLWAFKNGFEGQSFVGSALIDMYANCGSMREAGCIYKIMSDRDITIGN 53
                +R G  +H  A + G    + V +AL+DMY  CG +  A  ++  +  +D+   +
Sbjct: 258 GRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWS 317

Query: 52  SMIVGYTLNG 23
           ++I GY+ NG
Sbjct: 318 TLIAGYSQNG 327



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
 Frame = -2

Query: 412 GYAASVFRRTTDRDVISWSSMVVGYVQNGYFYEAQDTFREMITN-KIEPNPIAITSIISA 236
           G A SV      R+  +W++ + G V +G F EA +T+  M+ +  +  +      +I A
Sbjct: 92  GRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKA 151

Query: 235 CAGMSGIRQGKEIHLWAFKNGFEG----QSFVGSALIDMYANCGSMREAGCIYKIMSDRD 68
           CA +  + QG+ +      +   G      FV  AL+DM+A CG + EA  +++ M +RD
Sbjct: 152 CAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERD 211

Query: 67  ITIGNSMIVGYTLNGD 20
           +    +MI G    GD
Sbjct: 212 LAAWTAMIGGAVHAGD 227


>ref|XP_002442779.1| hypothetical protein SORBIDRAFT_08g002705 [Sorghum bicolor]
           gi|241943472|gb|EES16617.1| hypothetical protein
           SORBIDRAFT_08g002705 [Sorghum bicolor]
          Length = 560

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/134 (41%), Positives = 85/134 (63%)
 Frame = -2

Query: 406 AASVFRRTTDRDVISWSSMVVGYVQNGYFYEAQDTFREMITNKIEPNPIAITSIISACAG 227
           AA +FR   +RDVISW+S++ GY + G +  A D FR+M  N IEP  + + S + ACA 
Sbjct: 270 AARIFRDMPERDVISWNSLISGYAKLGMYSRALDVFRDMWKNDIEPTELTVVSALGACAE 329

Query: 226 MSGIRQGKEIHLWAFKNGFEGQSFVGSALIDMYANCGSMREAGCIYKIMSDRDITIGNSM 47
           +  +  G+ IH +    G E   +VG+AL+DMYA CG+++ A  ++  MS +D+T  N+M
Sbjct: 330 VGELELGRGIHDYLKSKGIEADGYVGNALVDMYAKCGNLKLARQVFDSMSIKDVTCWNTM 389

Query: 46  IVGYTLNGDTDLAL 5
           IVG +++G +  AL
Sbjct: 390 IVGLSVHGHSHDAL 403


>ref|XP_003576334.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Brachypodium distachyon]
          Length = 531

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/134 (40%), Positives = 85/134 (63%)
 Frame = -2

Query: 406 AASVFRRTTDRDVISWSSMVVGYVQNGYFYEAQDTFREMITNKIEPNPIAITSIISACAG 227
           AA VFR    RD +SW+S++ GY + G + +A + FREM  + +EP  + + S++ ACA 
Sbjct: 241 AARVFREMPGRDAVSWNSLIGGYTKLGRYVQALEVFREMQDSGVEPTELTLVSVLGACAE 300

Query: 226 MSGIRQGKEIHLWAFKNGFEGQSFVGSALIDMYANCGSMREAGCIYKIMSDRDITIGNSM 47
           +  +  GK +H +    G     +VG+AL+DMYA CGS+  A  +++ MS RDIT  N+M
Sbjct: 301 IGELELGKGVHGYIGSKGVVADGYVGNALVDMYAKCGSLELARQLFESMSTRDITCWNAM 360

Query: 46  IVGYTLNGDTDLAL 5
           IVG++++G +  AL
Sbjct: 361 IVGFSVHGYSRKAL 374


>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  111 bits (278), Expect = 5e-23
 Identities = 58/133 (43%), Positives = 80/133 (60%)
 Frame = -2

Query: 406 AASVFRRTTDRDVISWSSMVVGYVQNGYFYEAQDTFREMITNKIEPNPIAITSIISACAG 227
           A  VF      DV+SWS+++ GY QN  + E+   +  MI   +  N I  TS++ A   
Sbjct: 287 AHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGK 346

Query: 226 MSGIRQGKEIHLWAFKNGFEGQSFVGSALIDMYANCGSMREAGCIYKIMSDRDITIGNSM 47
           +  ++QGKE+H +  K G      VGSALI MYANCGS++EA  I++  SD+DI + NSM
Sbjct: 347 LELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSM 406

Query: 46  IVGYTLNGDTDLA 8
           IVGY L GD + A
Sbjct: 407 IVGYNLVGDFESA 419



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 52/134 (38%), Positives = 77/134 (57%)
 Frame = -2

Query: 406 AASVFRRTTDRDVISWSSMVVGYVQNGYFYEAQDTFREMITNKIEPNPIAITSIISACAG 227
           A S+F  T+D+D++ W+SM+VGY   G F  A  TFR +   +  PN I + SI+  C  
Sbjct: 388 AESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQ 447

Query: 226 MSGIRQGKEIHLWAFKNGFEGQSFVGSALIDMYANCGSMREAGCIYKIMSDRDITIGNSM 47
           M  +RQGKEIH +  K+G      VG++LIDMY+ CG +     ++K M  R++T  N+M
Sbjct: 448 MGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTM 507

Query: 46  IVGYTLNGDTDLAL 5
           I     +G  +  L
Sbjct: 508 ISACGSHGQGEKGL 521



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/127 (32%), Positives = 72/127 (56%)
 Frame = -2

Query: 406 AASVFRRTTDRDVISWSSMVVGYVQNGYFYEAQDTFREMITNKIEPNPIAITSIISACAG 227
           A  +F    DRD+ SW++++ G + NG   EA   FR+M +  + P+ + + SI+ AC  
Sbjct: 186 ARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGR 245

Query: 226 MSGIRQGKEIHLWAFKNGFEGQSFVGSALIDMYANCGSMREAGCIYKIMSDRDITIGNSM 47
           +  ++ G  + + A ++GFE   +V +A+IDMY  CG   EA  ++  M   D+   +++
Sbjct: 246 LEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTL 305

Query: 46  IVGYTLN 26
           I GY+ N
Sbjct: 306 IAGYSQN 312



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/130 (26%), Positives = 70/130 (53%)
 Frame = -2

Query: 409 YAASVFRRTTDRDVISWSSMVVGYVQNGYFYEAQDTFREMITNKIEPNPIAITSIISACA 230
           +A   FR    + +I+W++++ G V  G+F +A   +  M+ + + P+      ++ AC+
Sbjct: 85  HAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACS 144

Query: 229 GMSGIRQGKEIHLWAFKNGFEGQSFVGSALIDMYANCGSMREAGCIYKIMSDRDITIGNS 50
            +  ++ G+ +H        +   +V  A+IDM+A CGS+ +A  +++ M DRD+    +
Sbjct: 145 SLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTA 203

Query: 49  MIVGYTLNGD 20
           +I G   NG+
Sbjct: 204 LICGTMWNGE 213


>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Vitis vinifera]
          Length = 464

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/134 (41%), Positives = 87/134 (64%)
 Frame = -2

Query: 406 AASVFRRTTDRDVISWSSMVVGYVQNGYFYEAQDTFREMITNKIEPNPIAITSIISACAG 227
           A  +F +  +RD+ISW++M+  Y QN  F EA   F EM TN I+P+ + + +IISACA 
Sbjct: 126 AELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAH 185

Query: 226 MSGIRQGKEIHLWAFKNGFEGQSFVGSALIDMYANCGSMREAGCIYKIMSDRDITIGNSM 47
           +  +  GKEIHL+A + GF+   ++GSALIDMYA CGS+ ++  ++  +  +++   NS+
Sbjct: 186 LGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSI 245

Query: 46  IVGYTLNGDTDLAL 5
           I G  ++G  + AL
Sbjct: 246 IEGLAVHGYAEEAL 259



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/95 (31%), Positives = 52/95 (54%)
 Frame = -2

Query: 292 MITNKIEPNPIAITSIISACAGMSGIRQGKEIHLWAFKNGFEGQSFVGSALIDMYANCGS 113
           M+  ++ P     +S++ AC+ +S +  G+ +H   +K GF+   FV +AL+D Y N G 
Sbjct: 1   MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60

Query: 112 MREAGCIYKIMSDRDITIGNSMIVGYTLNGDTDLA 8
           + EA  ++  MS+RD+    +MI  +   GD   A
Sbjct: 61  IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSA 95