BLASTX nr result
ID: Cimicifuga21_contig00029108
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00029108 (762 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi... 355 8e-96 emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera] 350 1e-94 ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2... 347 1e-93 ref|NP_199422.1| pentatricopeptide repeat-containing protein [Ar... 333 2e-89 ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containi... 332 4e-89 >ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100 [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera] Length = 503 Score = 355 bits (910), Expect = 8e-96 Identities = 169/253 (66%), Positives = 214/253 (84%) Frame = +2 Query: 2 KITPSQVQQLIRAEKDVEKAKMIFDSATAEYANGFQHDNKTFGLIISRLAPANQFKAAEY 181 +I +QV QLI+AE+D++KA +IFDSATAEY NGF+H ++TF L+ISRL AN F+ AE Sbjct: 12 QIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEE 71 Query: 182 LLDRMKNEKCSFTEDIFLSIFRAYGRAHRPHDILRVFYTMKEFQHEPTEKSYITVFAILV 361 LL RMK EKC+ TEDIFLSI RAYGR H+P D +RVF MKE++ EP++KSYITVFAILV Sbjct: 72 LLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILV 131 Query: 362 KENQLKMAQKFYKYMKDVGVRPSTTIINVLIKALCMNEGTVDAALRVFRQMPDNGCTPDA 541 ENQLK+A +FY+YM+++G+ PS +NVLIKALC N GT+DAALR+FR+MP+ GC PD+ Sbjct: 132 GENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDS 191 Query: 542 YSYGTLISGMCKYGKITEAKELFQEMETKGCSPTVVTYSSLIHGLCLSKNLDEGMKLLEK 721 Y+YGTLI+G+C+ GKI EAKELF+EMETK CSPTVVTY+SLIHGLC SK+LD ++LLE+ Sbjct: 192 YTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEE 251 Query: 722 MSSKGIEPNVVTF 760 M+SKGI+PNV T+ Sbjct: 252 MASKGIKPNVFTY 264 Score = 75.1 bits (183), Expect = 2e-11 Identities = 50/197 (25%), Positives = 84/197 (42%) Frame = +2 Query: 170 AAEYLLDRMKNEKCSFTEDIFLSIFRAYGRAHRPHDILRVFYTMKEFQHEPTEKSYITVF 349 AA + M N C + ++ R + + +F M+ PT +Y ++ Sbjct: 174 AALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLI 233 Query: 350 AILVKENQLKMAQKFYKYMKDVGVRPSTTIINVLIKALCMNEGTVDAALRVFRQMPDNGC 529 L + L A + + M G++P+ + L+ C + G AL + M Sbjct: 234 HGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKS-GCSSRALELLDMMVSRRH 292 Query: 530 TPDAYSYGTLISGMCKYGKITEAKELFQEMETKGCSPTVVTYSSLIHGLCLSKNLDEGMK 709 P+ +Y TL+ G+CK GK+ EA E+ M+ +G P Y +I G C E Sbjct: 293 LPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAAN 352 Query: 710 LLEKMSSKGIEPNVVTF 760 L++M GI PN +T+ Sbjct: 353 FLDEMVLGGISPNRLTW 369 Score = 70.1 bits (170), Expect = 5e-10 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 7/227 (3%) Frame = +2 Query: 101 GFQHDNKTFGLIISRLAPANQFKAAEYLLDRMKNEKCSFTEDIFLSIFRAYGRAHRPHDI 280 G D+ T+G +I+ L + A+ L M+ + CS T + S+ ++ Sbjct: 186 GCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSA 245 Query: 281 LRVFYTMKEFQHEPTEKSYITVFAILVKENQLKMAQKFYKYMKDVGVRPSTTIINVLIKA 460 +R+ M +P +Y ++ K A + M P+ + L+ Sbjct: 246 IRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHG 305 Query: 461 LCMNEGTVDAALRVFRQMPDNGCTPDAYSYGTLISGMCKYGKITEAKELFQEMETKGCSP 640 LC EG + A+ + +M G PDA YG +ISG C K EA EM G SP Sbjct: 306 LC-KEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISP 364 Query: 641 TVVTYS-------SLIHGLCLSKNLDEGMKLLEKMSSKGIEPNVVTF 760 +T+S ++ GLC +++ + +L M ++GI + TF Sbjct: 365 NRLTWSLHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDAKTF 410 >emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera] Length = 477 Score = 350 bits (899), Expect = 1e-94 Identities = 168/253 (66%), Positives = 211/253 (83%) Frame = +2 Query: 2 KITPSQVQQLIRAEKDVEKAKMIFDSATAEYANGFQHDNKTFGLIISRLAPANQFKAAEY 181 +I +QV QLI+AE+D++KA +IFDSATAEY NGF+H ++TF L+ISRL AN F+ AE Sbjct: 12 QIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEE 71 Query: 182 LLDRMKNEKCSFTEDIFLSIFRAYGRAHRPHDILRVFYTMKEFQHEPTEKSYITVFAILV 361 LL RMK EKC+ TEDIFLSI RAYGR H+P D +RVF MKE++ EP++KSYITVFAILV Sbjct: 72 LLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILV 131 Query: 362 KENQLKMAQKFYKYMKDVGVRPSTTIINVLIKALCMNEGTVDAALRVFRQMPDNGCTPDA 541 ENQLK+A +FY+YM+++G+ PS +NVLIKALC N GT+DAALR+FR+MP+ GC P + Sbjct: 132 GENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHS 191 Query: 542 YSYGTLISGMCKYGKITEAKELFQEMETKGCSPTVVTYSSLIHGLCLSKNLDEGMKLLEK 721 Y+YGTLI G+C+ GKI EAKELF+EMETK CSPTVVTY SLIHGLC SK+LD ++LLE+ Sbjct: 192 YTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEE 251 Query: 722 MSSKGIEPNVVTF 760 M+SKGI+PNV T+ Sbjct: 252 MASKGIKPNVFTY 264 Score = 74.3 bits (181), Expect = 3e-11 Identities = 50/197 (25%), Positives = 84/197 (42%) Frame = +2 Query: 170 AAEYLLDRMKNEKCSFTEDIFLSIFRAYGRAHRPHDILRVFYTMKEFQHEPTEKSYITVF 349 AA + M N C + ++ R + + +F M+ PT +Y ++ Sbjct: 174 AALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLI 233 Query: 350 AILVKENQLKMAQKFYKYMKDVGVRPSTTIINVLIKALCMNEGTVDAALRVFRQMPDNGC 529 L + L A + + M G++P+ + L+ C + G AL + M Sbjct: 234 HGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKS-GCSSRALELLDMMVSRRH 292 Query: 530 TPDAYSYGTLISGMCKYGKITEAKELFQEMETKGCSPTVVTYSSLIHGLCLSKNLDEGMK 709 P+ +Y TL+ G+CK GK+ EA E+ M+ +G P Y +I G C E Sbjct: 293 LPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAAN 352 Query: 710 LLEKMSSKGIEPNVVTF 760 L++M GI PN +T+ Sbjct: 353 FLDEMVLGGISPNRLTW 369 Score = 67.0 bits (162), Expect = 4e-09 Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 7/220 (3%) Frame = +2 Query: 122 TFGLIISRLAPANQFKAAEYLLDRMKNEKCSFTEDIFLSIFRAYGRAHRPHDILRVFYTM 301 T+G +I L + A+ L M+ + CS T + S+ ++ +R+ M Sbjct: 193 TYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEM 252 Query: 302 KEFQHEPTEKSYITVFAILVKENQLKMAQKFYKYMKDVGVRPSTTIINVLIKALCMNEGT 481 +P +Y ++ K A + M P+ + L+ LC EG Sbjct: 253 ASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLC-KEGK 311 Query: 482 VDAALRVFRQMPDNGCTPDAYSYGTLISGMCKYGKITEAKELFQEMETKGCSPTVVTYS- 658 + A+ + +M G PDA YG +ISG C K EA EM G SP +T+S Sbjct: 312 LQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSL 371 Query: 659 ------SLIHGLCLSKNLDEGMKLLEKMSSKGIEPNVVTF 760 ++ GLC +++ + +L M ++GI + TF Sbjct: 372 HVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDAKTF 410 >ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa] Length = 478 Score = 347 bits (891), Expect = 1e-93 Identities = 162/253 (64%), Positives = 208/253 (82%) Frame = +2 Query: 2 KITPSQVQQLIRAEKDVEKAKMIFDSATAEYANGFQHDNKTFGLIISRLAPANQFKAAEY 181 +ITPS+V+QL+RAE+D+ KAK+IFDSA+AEY+NGF+HD+ TFG++IS+L AN+F+ AE Sbjct: 12 QITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEE 71 Query: 182 LLDRMKNEKCSFTEDIFLSIFRAYGRAHRPHDILRVFYTMKEFQHEPTEKSYITVFAILV 361 +L+RMK EKC TE+IFLSI R YGR H P D +RVF+ M +F +PT+KSYI+VFAILV Sbjct: 72 MLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILV 131 Query: 362 KENQLKMAQKFYKYMKDVGVRPSTTIINVLIKALCMNEGTVDAALRVFRQMPDNGCTPDA 541 +ENQLK+A FYKYM+++GVR S +NVLIKALC N GT+DAA +FR+MP GC PD+ Sbjct: 132 EENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDS 191 Query: 542 YSYGTLISGMCKYGKITEAKELFQEMETKGCSPTVVTYSSLIHGLCLSKNLDEGMKLLEK 721 Y+YGTLI+G+CK GK EAKELF+EM+TKGCSP+VVTYS L+HGLC + N+DE M L +K Sbjct: 192 YTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDK 251 Query: 722 MSSKGIEPNVVTF 760 M K IEPNV T+ Sbjct: 252 MKKKAIEPNVFTY 264 Score = 79.3 bits (194), Expect = 8e-13 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 7/227 (3%) Frame = +2 Query: 101 GFQHDNKTFGLIISRLAPANQFKAAEYLLDRMKNEKCSFTEDIFLSIFRAYGRAHRPHDI 280 G D+ T+G +I+ L + A+ L M + CS + + + +A + Sbjct: 186 GCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEA 245 Query: 281 LRVFYTMKEFQHEPTEKSYITVFAILVKENQLKMAQKFYKYMKDVGVRPSTTIINVLIKA 460 + +F MK+ EP +Y ++ L K A + + M +P+ + LI Sbjct: 246 MGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLING 305 Query: 461 LCMNEGTVDAALRVFRQMPDNGCTPDAYSYGTLISGMCKYGKITEAKELFQEMETKGCSP 640 LC EG + A+ +M G PDA YG +I+G C K EA EM SP Sbjct: 306 LC-KEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISP 364 Query: 641 TVVTYS-------SLIHGLCLSKNLDEGMKLLEKMSSKGIEPNVVTF 760 VT+S ++ GLC + NL+ +L M ++GI + TF Sbjct: 365 NRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTF 411 >ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana] gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 472 Score = 333 bits (854), Expect = 2e-89 Identities = 159/252 (63%), Positives = 203/252 (80%) Frame = +2 Query: 5 ITPSQVQQLIRAEKDVEKAKMIFDSATAEYANGFQHDNKTFGLIISRLAPANQFKAAEYL 184 ITPSQV +L+RAEKDVEK+ +FDSATAEYANG+ HD +FG ++ RL AN+FKAAE L Sbjct: 14 ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73 Query: 185 LDRMKNEKCSFTEDIFLSIFRAYGRAHRPHDILRVFYTMKEFQHEPTEKSYITVFAILVK 364 + RMK E C +EDI LSI R YGR HRP D LRVF+ MK+F +P++K+Y+TV AILV+ Sbjct: 74 IVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVE 133 Query: 365 ENQLKMAQKFYKYMKDVGVRPSTTIINVLIKALCMNEGTVDAALRVFRQMPDNGCTPDAY 544 ENQL +A KFYK M+++G+ P+ +NVLIKALC N+GTVDA L++F +MP GC PD+Y Sbjct: 134 ENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 193 Query: 545 SYGTLISGMCKYGKITEAKELFQEMETKGCSPTVVTYSSLIHGLCLSKNLDEGMKLLEKM 724 +YGTLISG+C++G+I EAK+LF EM K C+PTVVTY+SLI+GLC SKN+DE M+ LE+M Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253 Query: 725 SSKGIEPNVVTF 760 SKGIEPNV T+ Sbjct: 254 KSKGIEPNVFTY 265 Score = 103 bits (257), Expect = 4e-20 Identities = 50/156 (32%), Positives = 92/156 (58%) Frame = +2 Query: 281 LRVFYTMKEFQHEPTEKSYITVFAILVKENQLKMAQKFYKYMKDVGVRPSTTIINVLIKA 460 L++F M + +P +Y T+ + L + ++ A+K + M + P+ LI Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236 Query: 461 LCMNEGTVDAALRVFRQMPDNGCTPDAYSYGTLISGMCKYGKITEAKELFQEMETKGCSP 640 LC ++ VD A+R +M G P+ ++Y +L+ G+CK G+ +A ELF+ M +GC P Sbjct: 237 LCGSKN-VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 295 Query: 641 TVVTYSSLIHGLCLSKNLDEGMKLLEKMSSKGIEPN 748 +VTY++LI GLC + + E ++LL++M+ +G++P+ Sbjct: 296 NMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331 Score = 88.2 bits (217), Expect = 2e-15 Identities = 55/183 (30%), Positives = 85/183 (46%) Frame = +2 Query: 212 SFTEDIFLSIFRAYGRAHRPHDILRVFYTMKEFQHEPTEKSYITVFAILVKENQLKMAQK 391 S+T +S +GR + ++F M E PT +Y ++ L + A + Sbjct: 192 SYTYGTLISGLCRFGRID---EAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR 248 Query: 392 FYKYMKDVGVRPSTTIINVLIKALCMNEGTVDAALRVFRQMPDNGCTPDAYSYGTLISGM 571 + + MK G+ P+ + L+ LC +G A+ +F M GC P+ +Y TLI+G+ Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLC-KDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307 Query: 572 CKYGKITEAKELFQEMETKGCSPTVVTYSSLIHGLCLSKNLDEGMKLLEKMSSKGIEPNV 751 CK KI EA EL M +G P Y +I G C E L++M GI PN Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNR 367 Query: 752 VTF 760 +T+ Sbjct: 368 LTW 370 >ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like [Cucumis sativus] gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like [Cucumis sativus] Length = 501 Score = 332 bits (852), Expect = 4e-89 Identities = 159/252 (63%), Positives = 202/252 (80%) Frame = +2 Query: 5 ITPSQVQQLIRAEKDVEKAKMIFDSATAEYANGFQHDNKTFGLIISRLAPANQFKAAEYL 184 +TP+ VQQLI+AE+D++KA +IFDSATAEYANGF+HD TF L+IS+L ANQF+ AE L Sbjct: 42 VTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAETL 101 Query: 185 LDRMKNEKCSFTEDIFLSIFRAYGRAHRPHDILRVFYTMKEFQHEPTEKSYITVFAILVK 364 LDRMK EK TEDI LSI RAYGR H+P D +RVF+ M++F +PTEKSYI+V AILV+ Sbjct: 102 LDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVE 161 Query: 365 ENQLKMAQKFYKYMKDVGVRPSTTIINVLIKALCMNEGTVDAALRVFRQMPDNGCTPDAY 544 ENQLK A +FY+ M+ +G+ P+ T +NVLIKA C N GT+D A+ +FR M ++GC PD+Y Sbjct: 162 ENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSY 221 Query: 545 SYGTLISGMCKYGKITEAKELFQEMETKGCSPTVVTYSSLIHGLCLSKNLDEGMKLLEKM 724 +YGTLI+G+C++ I EAKEL QEMETKGCSP+VVTY+S+IHGLC N+DE M+LLE M Sbjct: 222 TYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDM 281 Query: 725 SSKGIEPNVVTF 760 K IEPNV T+ Sbjct: 282 KDKNIEPNVFTY 293 Score = 95.1 bits (235), Expect = 1e-17 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 7/228 (3%) Frame = +2 Query: 98 NGFQHDNKTFGLIISRLAPANQFKAAEYLLDRMKNEKCSFTEDIFLSIFRAYGRAHRPHD 277 +G + D+ T+G +I+ L A+ LL M+ + CS + + SI + + + Sbjct: 214 HGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDE 273 Query: 278 ILRVFYTMKEFQHEPTEKSYITVFAILVKENQLKMAQKFYKYMKDVGVRPSTTIINVLIK 457 +R+ MK+ EP +Y ++ K A+ + M +RP+ + L+ Sbjct: 274 AMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLN 333 Query: 458 ALCMNEGTVDAALRVFRQMPDNGCTPDAYSYGTLISGMCKYGKITEAKELFQEMETKGCS 637 LC NEG ++ AL +F +M G PDA YG +++ +C + EA EM G Sbjct: 334 GLC-NEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIK 392 Query: 638 PTVVTYS-------SLIHGLCLSKNLDEGMKLLEKMSSKGIEPNVVTF 760 P +T+S +IHGLC N + +L + ++GI V TF Sbjct: 393 PNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTF 440