BLASTX nr result
ID: Cimicifuga21_contig00029089
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00029089 (304 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig... 103 1e-20 ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein lig... 100 1e-19 ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein lig... 100 1e-19 ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 100 2e-19 ref|XP_002311188.1| predicted protein [Populus trichocarpa] gi|2... 99 4e-19 >ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine max] Length = 480 Score = 103 bits (257), Expect = 1e-20 Identities = 41/54 (75%), Positives = 46/54 (85%) Frame = -1 Query: 208 DEGNVFCWGWNKYGQLGLGDVVDRNTPFQVPMVGCLAKKVACGWWHTLVLVEPP 47 D G VFCWGWNKYGQLGLGDV+DRN P +V + GC+AK VACGWWHTL+L EPP Sbjct: 426 DNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAEPP 479 >ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform 2 [Glycine max] Length = 459 Score = 100 bits (249), Expect = 1e-19 Identities = 40/54 (74%), Positives = 45/54 (83%) Frame = -1 Query: 208 DEGNVFCWGWNKYGQLGLGDVVDRNTPFQVPMVGCLAKKVACGWWHTLVLVEPP 47 D G VFCWGWNKYGQLGLGDV+DRN P +V + GC+AK VACGWWHTL+L E P Sbjct: 405 DNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAESP 458 >ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform 1 [Glycine max] Length = 472 Score = 100 bits (249), Expect = 1e-19 Identities = 40/54 (74%), Positives = 45/54 (83%) Frame = -1 Query: 208 DEGNVFCWGWNKYGQLGLGDVVDRNTPFQVPMVGCLAKKVACGWWHTLVLVEPP 47 D G VFCWGWNKYGQLGLGDV+DRN P +V + GC+AK VACGWWHTL+L E P Sbjct: 418 DNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAESP 471 >ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus] gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus] Length = 491 Score = 99.8 bits (247), Expect = 2e-19 Identities = 39/54 (72%), Positives = 45/54 (83%) Frame = -1 Query: 208 DEGNVFCWGWNKYGQLGLGDVVDRNTPFQVPMVGCLAKKVACGWWHTLVLVEPP 47 ++G VFCWGWNKYGQLGLGDV+DRN P +VPM C +K VACGWWHTL+L E P Sbjct: 437 EDGKVFCWGWNKYGQLGLGDVIDRNIPVEVPMENCNSKNVACGWWHTLLLAESP 490 >ref|XP_002311188.1| predicted protein [Populus trichocarpa] gi|222851008|gb|EEE88555.1| predicted protein [Populus trichocarpa] Length = 148 Score = 99.0 bits (245), Expect = 4e-19 Identities = 39/54 (72%), Positives = 45/54 (83%) Frame = -1 Query: 208 DEGNVFCWGWNKYGQLGLGDVVDRNTPFQVPMVGCLAKKVACGWWHTLVLVEPP 47 ++G VFCWGWNKYGQLGLGDV+DRN P QV + GC+ K VACGWWHTL+L E P Sbjct: 94 EDGKVFCWGWNKYGQLGLGDVIDRNVPSQVTIDGCVPKNVACGWWHTLLLAESP 147