BLASTX nr result

ID: Cimicifuga21_contig00029089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029089
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig...   103   1e-20
ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein lig...   100   1e-19
ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein lig...   100   1e-19
ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   100   2e-19
ref|XP_002311188.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19

>ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  103 bits (257), Expect = 1e-20
 Identities = 41/54 (75%), Positives = 46/54 (85%)
 Frame = -1

Query: 208 DEGNVFCWGWNKYGQLGLGDVVDRNTPFQVPMVGCLAKKVACGWWHTLVLVEPP 47
           D G VFCWGWNKYGQLGLGDV+DRN P +V + GC+AK VACGWWHTL+L EPP
Sbjct: 426 DNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAEPP 479


>ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Glycine max]
          Length = 459

 Score =  100 bits (249), Expect = 1e-19
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = -1

Query: 208 DEGNVFCWGWNKYGQLGLGDVVDRNTPFQVPMVGCLAKKVACGWWHTLVLVEPP 47
           D G VFCWGWNKYGQLGLGDV+DRN P +V + GC+AK VACGWWHTL+L E P
Sbjct: 405 DNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAESP 458


>ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Glycine max]
          Length = 472

 Score =  100 bits (249), Expect = 1e-19
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = -1

Query: 208 DEGNVFCWGWNKYGQLGLGDVVDRNTPFQVPMVGCLAKKVACGWWHTLVLVEPP 47
           D G VFCWGWNKYGQLGLGDV+DRN P +V + GC+AK VACGWWHTL+L E P
Sbjct: 418 DNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAESP 471


>ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
           gi|449516435|ref|XP_004165252.1| PREDICTED: E3
           ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 491

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 39/54 (72%), Positives = 45/54 (83%)
 Frame = -1

Query: 208 DEGNVFCWGWNKYGQLGLGDVVDRNTPFQVPMVGCLAKKVACGWWHTLVLVEPP 47
           ++G VFCWGWNKYGQLGLGDV+DRN P +VPM  C +K VACGWWHTL+L E P
Sbjct: 437 EDGKVFCWGWNKYGQLGLGDVIDRNIPVEVPMENCNSKNVACGWWHTLLLAESP 490


>ref|XP_002311188.1| predicted protein [Populus trichocarpa] gi|222851008|gb|EEE88555.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 39/54 (72%), Positives = 45/54 (83%)
 Frame = -1

Query: 208 DEGNVFCWGWNKYGQLGLGDVVDRNTPFQVPMVGCLAKKVACGWWHTLVLVEPP 47
           ++G VFCWGWNKYGQLGLGDV+DRN P QV + GC+ K VACGWWHTL+L E P
Sbjct: 94  EDGKVFCWGWNKYGQLGLGDVIDRNVPSQVTIDGCVPKNVACGWWHTLLLAESP 147


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