BLASTX nr result

ID: Cimicifuga21_contig00029088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029088
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303194.1| predicted protein [Populus trichocarpa] gi|1...    82   3e-14
ref|XP_002298205.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
gb|ABK93884.1| unknown [Populus trichocarpa]                           79   5e-13
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    78   7e-13
ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853...    77   1e-12

>ref|XP_002303194.1| predicted protein [Populus trichocarpa] gi|118486915|gb|ABK95291.1|
           unknown [Populus trichocarpa]
           gi|222840626|gb|EEE78173.1| predicted protein [Populus
           trichocarpa]
          Length = 101

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/62 (69%), Positives = 45/62 (72%)
 Frame = -1

Query: 188 MDTNSWGIQLGPVSRQRIVNKIMETLTRRLPNPGPEQLLQLKKIAVSFEENIYVESTSQS 9
           MDT  W  QL P SRQRIVNKIMETL R LP  G E L +LKKIAV FEE IY  +TSQS
Sbjct: 1   MDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQS 60

Query: 8   DY 3
           DY
Sbjct: 61  DY 62


>ref|XP_002298205.1| predicted protein [Populus trichocarpa] gi|222845463|gb|EEE83010.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/62 (67%), Positives = 45/62 (72%)
 Frame = -1

Query: 188 MDTNSWGIQLGPVSRQRIVNKIMETLTRRLPNPGPEQLLQLKKIAVSFEENIYVESTSQS 9
           MDT  W  QL P +RQRIVNKIMETL R LP  G E L +LKKIAV FEE IY  +TSQS
Sbjct: 17  MDTGDWRTQLQPDARQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQS 76

Query: 8   DY 3
           DY
Sbjct: 77  DY 78


>gb|ABK93884.1| unknown [Populus trichocarpa]
          Length = 95

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/62 (64%), Positives = 44/62 (70%)
 Frame = -1

Query: 188 MDTNSWGIQLGPVSRQRIVNKIMETLTRRLPNPGPEQLLQLKKIAVSFEENIYVESTSQS 9
           MDT  W  QL P SRQRIVN+IME L R LP  G E L +LKKIAV FEE +Y  +TSQS
Sbjct: 1   MDTGDWRTQLQPGSRQRIVNRIMEILKRHLPFSGQEGLQELKKIAVRFEEKVYTAATSQS 60

Query: 8   DY 3
           DY
Sbjct: 61  DY 62


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/62 (66%), Positives = 44/62 (70%)
 Frame = -1

Query: 188 MDTNSWGIQLGPVSRQRIVNKIMETLTRRLPNPGPEQLLQLKKIAVSFEENIYVESTSQS 9
           +DT  W   L P SRQRIVNKIMETL R LP  G E L +LKKIAV FEE IY  +TSQS
Sbjct: 17  VDTGDWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGLEELKKIAVRFEEKIYTAATSQS 76

Query: 8   DY 3
           DY
Sbjct: 77  DY 78


>ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853144 [Vitis vinifera]
          Length = 170

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/62 (64%), Positives = 44/62 (70%)
 Frame = -1

Query: 188 MDTNSWGIQLGPVSRQRIVNKIMETLTRRLPNPGPEQLLQLKKIAVSFEENIYVESTSQS 9
           MD   W  QL P SRQRIVNKIM+TL R LP  G E L +L+KIAV FEE IY  +TSQS
Sbjct: 1   MDGGDWRTQLPPDSRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAVRFEEKIYTAATSQS 60

Query: 8   DY 3
           DY
Sbjct: 61  DY 62