BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029087
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]    84   2e-14
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containi...    76   4e-12

>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 31/164 (18%)
 Frame = -3

Query: 400 MNGPVKAFSKSKHLING-------VQHATTTSTI------------------------FT 314
           M+GP +A SKSKHL+         +Q  T+  +I                         +
Sbjct: 1   MDGPSQALSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLS 60

Query: 313 NFRSKLSLCGNTIEARQMFDELPQRTSALYNLLMSYYIQNQQPNQSLLLFSEMLTSGEHQ 134
           +  +  ++CG    AR++FDEL   +   +N ++  Y  +     +L LF +ML SG   
Sbjct: 61  SLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRW 120

Query: 133 PDHFTFPLIFKACGNFPNLKTGKTVHCRALFSGYESCEYVQNSL 2
           PD++T+P + KACG++   + G  +H R + SG++S  +VQNSL
Sbjct: 121 PDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSL 164


>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
           protein product [Vitis vinifera]
          Length = 676

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 31/164 (18%)
 Frame = -3

Query: 400 MNGPVKAFSKSKHLING-------VQHATTTSTI------------------------FT 314
           M+GP +A SKSKHL+         +Q  T+  +I                         +
Sbjct: 1   MDGPSQALSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLS 60

Query: 313 NFRSKLSLCGNTIEARQMFDELPQRTSALYNLLMSYYIQNQQPNQSLLLFSEMLTSGEHQ 134
           +  +  ++ G    AR++FDEL   +   +N ++  Y  +     +L LF +ML SG   
Sbjct: 61  SLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRW 120

Query: 133 PDHFTFPLIFKACGNFPNLKTGKTVHCRALFSGYESCEYVQNSL 2
           PD++T+P + KACG++   + G  +H R + SG++S  +VQNSL
Sbjct: 121 PDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSL 164


>ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 40/120 (33%), Positives = 65/120 (54%)
 Frame = -3

Query: 361 LINGVQHATTTSTIFTNFRSKLSLCGNTIEARQMFDELPQRTSALYNLLMSYYIQNQQPN 182
           + +G+ H+     + ++     + CG    AR++FD+L   +  L+N ++  Y+      
Sbjct: 106 ITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHF 165

Query: 181 QSLLLFSEMLTSGEHQPDHFTFPLIFKACGNFPNLKTGKTVHCRALFSGYESCEYVQNSL 2
            +L +F  M+ SG+  PD +TFPL+ KAC     L  G  +H RAL SG+ S  +VQNSL
Sbjct: 166 DALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSL 225


>ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 40/120 (33%), Positives = 65/120 (54%)
 Frame = -3

Query: 361 LINGVQHATTTSTIFTNFRSKLSLCGNTIEARQMFDELPQRTSALYNLLMSYYIQNQQPN 182
           + +G+ H+     + ++     + CG    AR++FD+L   +  L+N ++  Y+      
Sbjct: 106 ITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHF 165

Query: 181 QSLLLFSEMLTSGEHQPDHFTFPLIFKACGNFPNLKTGKTVHCRALFSGYESCEYVQNSL 2
            +L +F  M+ SG+  PD +TFPL+ KAC     L  G  +H RAL SG+ S  +VQNSL
Sbjct: 166 DALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSL 225


>ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
 Frame = -3

Query: 388 VKAFSKSKHLINGVQ---HATTTSTIFTN--FRSKLS----LCGNTIEARQMFDELPQRT 236
           +++ + SK L   +Q   H TT  T+  N    +KL+    +CG+   A+ +FD++  + 
Sbjct: 29  LQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKN 88

Query: 235 SALYNLLMSYYIQNQQPNQSLLLFSEMLTSGEHQPDHFTFPLIFKACGNFPNLKTGKTVH 56
           S L+N ++  Y  N  P+++L L+ +ML  G+ +PD+FT+P + KACG+    + G+ VH
Sbjct: 89  SFLWNSMIRGYACNNSPSRALFLYLKMLHFGQ-KPDNFTYPFVLKACGDLLLREMGRKVH 147

Query: 55  CRALFSGYESCEYVQNSL 2
              +  G E   YV NS+
Sbjct: 148 ALVVVGGLEEDVYVGNSI 165