BLASTX nr result

ID: Cimicifuga21_contig00029051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029051
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836112.1| ribosomal protein S18 [Megaleranthis sanicul...   161   4e-38
ref|YP_001004208.1| ribosomal protein S18 [Ranunculus macranthus...   161   6e-38
ref|YP_003433997.1| ribosomal protein S18 [Typha latifolia] gi|6...   157   8e-37
gb|AEZ48800.1| ribosomal protein S18, partial [Brocchinia micran...   157   8e-37
ref|YP_004769652.1| ribosomal protein S18 (chloroplast) [Spirode...   157   8e-37

>ref|YP_002836112.1| ribosomal protein S18 [Megaleranthis saniculifolia]
           gi|226933904|gb|ACO92037.1| ribosomal protein S18
           [Megaleranthis saniculifolia]
          Length = 101

 Score =  161 bits (408), Expect = 4e-38
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = -3

Query: 257 PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 78
           PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN
Sbjct: 20  PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79

Query: 77  NEKQFERTESTPRTTGPRTRNK 12
           NEKQFERTESTPRTTGPRTRNK
Sbjct: 80  NEKQFERTESTPRTTGPRTRNK 101


>ref|YP_001004208.1| ribosomal protein S18 [Ranunculus macranthus]
           gi|69216271|gb|AAZ03916.1| ribosomal protein S18
           [Ranunculus macranthus] gi|85540826|gb|ABC70778.1|
           ribosomal protein S18 [Ranunculus macranthus]
          Length = 101

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/82 (98%), Positives = 82/82 (100%)
 Frame = -3

Query: 257 PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 78
           PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLIT+AIKQARILSLLPFLN
Sbjct: 20  PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITVAIKQARILSLLPFLN 79

Query: 77  NEKQFERTESTPRTTGPRTRNK 12
           NEKQFERTESTPRTTGPRTRNK
Sbjct: 80  NEKQFERTESTPRTTGPRTRNK 101


>ref|YP_003433997.1| ribosomal protein S18 [Typha latifolia] gi|69216273|gb|AAZ03917.1|
           ribosomal protein S18 [Typha latifolia]
           gi|281371794|gb|ADA63721.1| ribosomal protein S18 [Typha
           latifolia]
          Length = 101

 Score =  157 bits (397), Expect = 8e-37
 Identities = 80/82 (97%), Positives = 80/82 (97%)
 Frame = -3

Query: 257 PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 78
           PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN
Sbjct: 20  PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79

Query: 77  NEKQFERTESTPRTTGPRTRNK 12
           NEKQFER ES PRTTGPRTRNK
Sbjct: 80  NEKQFERAESIPRTTGPRTRNK 101


>gb|AEZ48800.1| ribosomal protein S18, partial [Brocchinia micrantha]
          Length = 101

 Score =  157 bits (397), Expect = 8e-37
 Identities = 80/82 (97%), Positives = 80/82 (97%)
 Frame = -3

Query: 257 PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 78
           PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN
Sbjct: 20  PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79

Query: 77  NEKQFERTESTPRTTGPRTRNK 12
           NEKQFER ES PRTTGPRTRNK
Sbjct: 80  NEKQFERAESIPRTTGPRTRNK 101


>ref|YP_004769652.1| ribosomal protein S18 (chloroplast) [Spirodela polyrhiza]
           gi|341834093|gb|AEK94364.1| ribosomal protein S18
           [Spirodela polyrhiza]
          Length = 101

 Score =  157 bits (397), Expect = 8e-37
 Identities = 80/82 (97%), Positives = 80/82 (97%)
 Frame = -3

Query: 257 PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 78
           PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN
Sbjct: 20  PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79

Query: 77  NEKQFERTESTPRTTGPRTRNK 12
           NEKQFERTES PR TGPRTRNK
Sbjct: 80  NEKQFERTESIPRATGPRTRNK 101


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