BLASTX nr result

ID: Cimicifuga21_contig00029049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029049
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis ...   204   2e-50
emb|CBI30368.3| unnamed protein product [Vitis vinifera]              204   2e-50
emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]   204   2e-50
gb|AEB96142.1| E2F protein [Cocos nucifera]                           192   5e-47
gb|AEB96141.1| E2F protein [Cocos nucifera]                           187   2e-45

>ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis vinifera]
          Length = 498

 Score =  204 bits (519), Expect = 2e-50
 Identities = 109/174 (62%), Positives = 129/174 (74%), Gaps = 4/174 (2%)
 Frame = +2

Query: 227 MSGIRASNRTAQ---SSGQIAQSLKRQLPFSSMKPPFVSPDDYHRLSGGN-RGVADEQAE 394
           MSG RA  R+A    SSGQI + +KR LPF+S KPPFV PDDYHR S  +  GVA+ + E
Sbjct: 1   MSGPRAPTRSAPPPPSSGQILRPMKRHLPFTSTKPPFVPPDDYHRFSSADAHGVANHEPE 60

Query: 395 SIVVKSPQLKRKAETEDYEAESSEWTFSPQYTEVVKSPFRTPVSGKGGRIYSRPKVPKYS 574
            IVVKSPQLKRK+  +D E  SSEWT SP Y +   SPFRTPVSGKGGRIYS+ KV K +
Sbjct: 61  GIVVKSPQLKRKSAMDDNEVGSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSKVSKGN 120

Query: 575 GSLPQTPISDAGSPSGMDHTPVVTCRYNNSLAVLTKKFINLIKYAEDDVLDLNK 736
              PQTP+S+AGSPS +  TP   CRY++SL +LTKKFINLIK+AED +LDLNK
Sbjct: 121 VCGPQTPVSNAGSPSTL--TPAGNCRYDSSLGLLTKKFINLIKHAEDGILDLNK 172


>emb|CBI30368.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  204 bits (519), Expect = 2e-50
 Identities = 109/174 (62%), Positives = 129/174 (74%), Gaps = 4/174 (2%)
 Frame = +2

Query: 227 MSGIRASNRTAQ---SSGQIAQSLKRQLPFSSMKPPFVSPDDYHRLSGGN-RGVADEQAE 394
           MSG RA  R+A    SSGQI + +KR LPF+S KPPFV PDDYHR S  +  GVA+ + E
Sbjct: 1   MSGPRAPTRSAPPPPSSGQILRPMKRHLPFTSTKPPFVPPDDYHRFSSADAHGVANHEPE 60

Query: 395 SIVVKSPQLKRKAETEDYEAESSEWTFSPQYTEVVKSPFRTPVSGKGGRIYSRPKVPKYS 574
            IVVKSPQLKRK+  +D E  SSEWT SP Y +   SPFRTPVSGKGGRIYS+ KV K +
Sbjct: 61  GIVVKSPQLKRKSAMDDNEVGSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSKVSKGN 120

Query: 575 GSLPQTPISDAGSPSGMDHTPVVTCRYNNSLAVLTKKFINLIKYAEDDVLDLNK 736
              PQTP+S+AGSPS +  TP   CRY++SL +LTKKFINLIK+AED +LDLNK
Sbjct: 121 VCGPQTPVSNAGSPSTL--TPAGNCRYDSSLGLLTKKFINLIKHAEDGILDLNK 172


>emb|CAN67410.1| hypothetical protein VITISV_025621 [Vitis vinifera]
          Length = 735

 Score =  204 bits (519), Expect = 2e-50
 Identities = 109/174 (62%), Positives = 129/174 (74%), Gaps = 4/174 (2%)
 Frame = +2

Query: 227 MSGIRASNRTAQ---SSGQIAQSLKRQLPFSSMKPPFVSPDDYHRLSGGN-RGVADEQAE 394
           MSG RA  R+A    SSGQI + +KR LPF+S KPPFV PDDYHR S  +  GVA+ + E
Sbjct: 1   MSGPRAPTRSAPPPPSSGQILRPMKRHLPFTSTKPPFVPPDDYHRFSSADAHGVANHEPE 60

Query: 395 SIVVKSPQLKRKAETEDYEAESSEWTFSPQYTEVVKSPFRTPVSGKGGRIYSRPKVPKYS 574
            IVVKSPQLKRK+  +D E  SSEWT SP Y +   SPFRTPVSGKGGRIYS+ KV K +
Sbjct: 61  GIVVKSPQLKRKSAMDDNEVGSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSKVSKGN 120

Query: 575 GSLPQTPISDAGSPSGMDHTPVVTCRYNNSLAVLTKKFINLIKYAEDDVLDLNK 736
              PQTP+S+AGSPS +  TP   CRY++SL +LTKKFINLIK+AED +LDLNK
Sbjct: 121 VCGPQTPVSNAGSPSTL--TPAGNCRYDSSLGLLTKKFINLIKHAEDGILDLNK 172


>gb|AEB96142.1| E2F protein [Cocos nucifera]
          Length = 451

 Score =  192 bits (489), Expect = 5e-47
 Identities = 104/174 (59%), Positives = 129/174 (74%), Gaps = 3/174 (1%)
 Frame = +2

Query: 224 LMSGIRASNRTAQS-SGQIAQSLKRQLPFSSMKPPFVSPDDYHRLSGGN-RGVADEQAES 397
           +  G  A NR+AQ  +GQI Q LKR LPF S++PPFV+PD+YHR S  + R +AD+ A++
Sbjct: 1   MTGGRAAGNRSAQQQAGQIFQPLKRHLPFPSVRPPFVAPDEYHRFSAADCRRIADDVADT 60

Query: 398 IVVKSPQLKRKAETEDYEA-ESSEWTFSPQYTEVVKSPFRTPVSGKGGRIYSRPKVPKYS 574
           + VK+P LKRK + ED EA ESSEWT SP Y E V SP  TPVSGKGGR Y R KV K S
Sbjct: 61  LAVKTP-LKRKPDQEDNEAAESSEWTTSPGYAEAVTSPLLTPVSGKGGRTYGRSKVGKNS 119

Query: 575 GSLPQTPISDAGSPSGMDHTPVVTCRYNNSLAVLTKKFINLIKYAEDDVLDLNK 736
            S PQTP+S+A SPS    TP+ TCRY++SL +LTKKFINL+K+A+D +LDLNK
Sbjct: 120 KSGPQTPMSNAWSPSSNPLTPMGTCRYDSSLGLLTKKFINLLKHAQDGILDLNK 173


>gb|AEB96141.1| E2F protein [Cocos nucifera]
          Length = 471

 Score =  187 bits (475), Expect = 2e-45
 Identities = 106/175 (60%), Positives = 128/175 (73%), Gaps = 5/175 (2%)
 Frame = +2

Query: 227 MSGIR-ASNRTAQS-SGQIAQSLKRQLPFSSMKPPFVSPDDYHRLSG--GNRGVADEQAE 394
           MSG R A NR+AQ  +GQI Q LKR   F S KPPFV+PD+YHR S   G R   D+ ++
Sbjct: 1   MSGGRPAGNRSAQQQAGQIFQPLKRHPLFPSAKPPFVAPDEYHRFSAADGRRITPDDVSD 60

Query: 395 SIVVKSPQLKRKAETEDYEA-ESSEWTFSPQYTEVVKSPFRTPVSGKGGRIYSRPKVPKY 571
           ++V+K+P LKRK E ED EA ESSEWT SP Y E V SP  TPVSGKGGR + R KV KY
Sbjct: 61  ALVIKTP-LKRKPEQEDNEAAESSEWTNSPGYAEAVTSPLLTPVSGKGGRNHGRSKVAKY 119

Query: 572 SGSLPQTPISDAGSPSGMDHTPVVTCRYNNSLAVLTKKFINLIKYAEDDVLDLNK 736
           + S P TP+S+AGSPS    TPV TCRY++SL +LTKKFINL+K+A+D +LDLNK
Sbjct: 120 NKSGPLTPLSNAGSPSSNPLTPVGTCRYDSSLGLLTKKFINLLKHAQDGILDLNK 174


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